RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 SLC50A1Q9BRV3 221 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 RNASE7Q9H1E1 156 aaKnown RBP2.02□□□□□ -2.09
FN1-221ENST00000480737 PRO1933Q9H354 126 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 FBXL15Q9H469 300 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 C21orf62Q9NYP8 219 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 RABAC1Q9UI14 185 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 ZDBF2Q9HCK1 2354 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 ASCC3Q8N3C0 2202 aaKnown RBP2.02□□□□□ -2.09
FN1-221ENST00000480737 CABIN1Q9Y6J0 2220 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 SDK2Q58EX2 2172 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 ALPK2Q86TB3 2170 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 COL6A3P12111 3177 aa2.02□□□□□ -2.09
FN1-221ENST00000480737 KNL1Q8NG31 2342 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 PRUNE2Q8WUY3 3088 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 TRAV5A0A0B4J249 113 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 LOC100131303A0A0U1RQF7 123 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 TMEM189A5PLL7 270 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 FAM223BA6NKX1 122 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 FABP5P3A8MUU1 101 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 SYS1-DBNDD2H3BUS1 97 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 K7EIM0 57 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 DLEU1O43261 78 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 IGKV1-17P01599 117 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 IL4P05112 153 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 CRYGDP07320 174 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 C3orf79P0CE67 100 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 IGLC3P0DOY3 106 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 PYYP10082 97 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 COL8A2P25067 703 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 CTRLP40313 264 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 APOC4P55056 127 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 RIPPLY3P57055 190 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 CACNG7P62955 275 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 SEC11AP67812 179 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 HIST1H1AQ02539 215 aaPredicted RBP2.01□□□□□ -2.09
FN1-221ENST00000480737 HES1Q14469 280 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 NSUN5P1Q3KNT7 163 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 SPATA45Q537H7 98 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 Q56UQ5 140 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 SLC25A34Q6PIV7 304 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 Q6ZN92 141 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 GOLT1AQ6ZVE7 132 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 FA2HQ7L5A8 372 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 VMO1Q7Z5L0 202 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 MRPL55Q7Z7F7 128 aaKnown RBP2.01□□□□□ -2.09
FN1-221ENST00000480737 FAM223AQ8IWN6 122 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 ORMDL3Q8N138 153 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 TMEM86BQ8N661 226 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 DEFB125Q8N687 156 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 Q8N6K4 173 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 BLNKQ8WV28 456 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 USMG5Q96IX5 58 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 FAM103A1Q9BTL3 118 aaKnown RBP2.01□□□□□ -2.09
FN1-221ENST00000480737 CNFNQ9BYD5 112 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 NXT2Q9NPJ8 142 aaKnown RBP2.01□□□□□ -2.09
FN1-221ENST00000480737 SS18L2Q9UHA2 77 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 PSG8Q9UQ74 426 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 U3KQK5 164 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 NCOA6Q14686 2063 aaPredicted RBP2.01□□□□□ -2.09
FN1-221ENST00000480737 CFAP54Q96N23 3096 aa2.01□□□□□ -2.09
FN1-221ENST00000480737 TTC28Q96AY4 2481 aa2□□□□□ -2.09
FN1-221ENST00000480737 PTPRZ1P23471 2315 aaPredicted RBP2□□□□□ -2.09
FN1-221ENST00000480737 IGHV3OR16-12A0A075B7B8 117 aa2□□□□□ -2.09
FN1-221ENST00000480737 TRAV8-4A0A0B4J246 113 aa2□□□□□ -2.09
FN1-221ENST00000480737 A0A0G2JLM5 398 aa2□□□□□ -2.09
FN1-221ENST00000480737 A0A0U1RQV1 116 aa2□□□□□ -2.09
FN1-221ENST00000480737 LINC01546A6NGU7 62 aa2□□□□□ -2.09
FN1-221ENST00000480737 OR4C46A6NHA9 309 aa2□□□□□ -2.09
FN1-221ENST00000480737 C2orf70A6NJV1 201 aa2□□□□□ -2.09
FN1-221ENST00000480737 E7EUB6 86 aa2□□□□□ -2.09
FN1-221ENST00000480737 E9PLD3 99 aa2□□□□□ -2.09
FN1-221ENST00000480737 NUPR1O60356 82 aa2□□□□□ -2.09
FN1-221ENST00000480737 HBDP02042 147 aa2□□□□□ -2.09
FN1-221ENST00000480737 RBMY1CP0DJD4 496 aa2□□□□□ -2.09
FN1-221ENST00000480737 HLA-DRB4P13762 266 aa2□□□□□ -2.09
FN1-221ENST00000480737 NTF3P20783 257 aa2□□□□□ -2.09
FN1-221ENST00000480737 COX7A1P24310 79 aa2□□□□□ -2.09
FN1-221ENST00000480737 TSPOP30536 169 aa2□□□□□ -2.09
FN1-221ENST00000480737 PFN2P35080 140 aa2□□□□□ -2.09
FN1-221ENST00000480737 CXCL6P80162 114 aa2□□□□□ -2.09
FN1-221ENST00000480737 ATP5G2Q06055 141 aa2□□□□□ -2.09
FN1-221ENST00000480737 LGALS9BQ3B8N2 356 aa2□□□□□ -2.09
FN1-221ENST00000480737 C10orf55Q5SWW7 151 aa2□□□□□ -2.09
FN1-221ENST00000480737 TMEM78Q5T7P6 136 aa2□□□□□ -2.09
FN1-221ENST00000480737 LINC01545Q5VT33 79 aa2□□□□□ -2.09
FN1-221ENST00000480737 FAM104BQ5XKR9 115 aa2□□□□□ -2.09
FN1-221ENST00000480737 LGALS9CQ6DKI2 356 aa2□□□□□ -2.09
FN1-221ENST00000480737 C11orf71Q6IPW1 123 aa2□□□□□ -2.09
FN1-221ENST00000480737 PRNTQ86SH4 94 aa2□□□□□ -2.09
FN1-221ENST00000480737 TEX29Q8N6K0 151 aa2□□□□□ -2.09
FN1-221ENST00000480737 FER1L6-AS1Q8NA97 138 aa2□□□□□ -2.09
FN1-221ENST00000480737 OR4X2Q8NGF9 303 aa2□□□□□ -2.09
FN1-221ENST00000480737 LINC01560Q8TB33 94 aa2□□□□□ -2.09
FN1-221ENST00000480737 PGLYRP4Q96LB8 373 aa2□□□□□ -2.09
FN1-221ENST00000480737 LINC00477Q96M19 166 aa2□□□□□ -2.09
FN1-221ENST00000480737 METTL26Q96S19 204 aa2□□□□□ -2.09
FN1-221ENST00000480737 VPS25Q9BRG1 176 aa2□□□□□ -2.09
FN1-221ENST00000480737 SNHG12Q9BXW3 62 aa2□□□□□ -2.09
FN1-221ENST00000480737 HLA-DRB4X5D2U9 266 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms