RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 GREB1Q4ZG55 1949 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 CDPF1Q6NVV7 123 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 CFHR4Q92496 578 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 USP9YO00507 2555 aaPredicted RBP4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 WFDC2Q14508 124 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 GPHB5Q86YW7 130 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 Q9H8V8 135 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 SPINK13Q1W4C9 94 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 LINC00527Q9UJ94 153 aa4.8□□□□□ -1.64
PRPF4B-205ENST00000480058 WDR90Q96KV7 1748 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 TDRG1Q3Y452 100 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 K7ENP7 123 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 IGHG2P01859 326 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 DKK4Q9UBT3 224 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 MTCL1Q9Y4B5 1905 aaKnown RBP4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 IGKV1OR2-108A0A075B7D4 117 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 TMEM219Q86XT9 240 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 ICOSQ9Y6W8 199 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 ABCA2Q9BZC7 2435 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 ZNF503-AS2A6NEH8 195 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 G3V318 75 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 HTN3P15516 51 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 SND1-IT1Q9HBX3 110 aa4.79□□□□□ -1.64
PRPF4B-205ENST00000480058 NYNRINQ9P2P1 1898 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 PSME4Q14997 1843 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 IGHV1-58A0A0C4DH39 117 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 IGFL4Q6B9Z1 124 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 ZNF625Q96I27 306 aaPredicted RBP4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 PLA2G2CQ5R387 149 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 NKAPP1Q8N9T2 125 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 KLHL30-AS1Q8NEE0 82 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 FGF23Q9GZV9 251 aaPredicted RBP4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 IGHV7-81A0A0B4J1V7 117 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 K7ERJ3 54 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 IGLV2-8P01709 118 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 MP68P56378 58 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 PDCD11Q14690 1871 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 P0DMU3 169 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 FAM231AP0DMU4 169 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 FAM231CP0DMU5 169 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 RBX1P62877 108 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 LCNL1Q6ZST4 164 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 NDUFA11Q86Y39 141 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 DAND5Q8N907 189 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 ZGRF1Q86YA3 2104 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 IGHV4OR15-8A0A075B7B6 117 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 A0A087WW49 117 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 Q6Q795 121 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 SELENOKQ9Y6D0 94 aa4.78□□□□□ -1.64
PRPF4B-205ENST00000480058 NCOR2Q9Y618 2525 aa4.78□□□□□ -1.65
PRPF4B-205ENST00000480058 TRAV26-1A0A087WT03 109 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 TIMM17BO60830 172 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 WT1P19544 449 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 NPC2P61916 151 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 SPATA25Q9BR10 227 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 TPSG1Q9NRR2 321 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 CTSZQ9UBR2 303 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 PROP1O75360 226 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 APOC4P55056 127 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 SIP14410 1827 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 FAM240AA0A1B0GVK7 77 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 PFN2P35080 140 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 PIK3CD-AS1Q5SR53 167 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 MUSTN1Q8IVN3 82 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 TP53BP1Q12888 1972 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 TRBV6-5A0A0K0K1A5 114 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 A0A1B0GX51 115 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 BRD3OSQ6XYD6 125 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 Q6ZUT4 128 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 UBE2E2Q96LR5 201 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 COX7A2LO14548 114 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 WISP1O95388 367 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 SPRY4Q9C004 299 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 MDFICQ9P1T7 246 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 XCL2Q9UBD3 114 aa4.77□□□□□ -1.65
PRPF4B-205ENST00000480058 SBF2Q86WG5 1849 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 PLXNA3P51805 1871 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 PLXNA4Q9HCM2 1894 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 FAM236AA0A1B0GUQ0 79 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 FAM236BA0A1B0GV22 79 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 TEX22C9J3V5 150 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 TMEM256-PLSCR3K7ERE1 68 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 DAD1P61803 113 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 HIST2H2BCQ6DN03 193 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 HIST2H2BDQ6DRA6 164 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 NDUFC1O43677 76 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 LINC00173Q6ZV60 143 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 PYGO1Q9Y3Y4 419 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 NACAE9PAV3 2078 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 PSMB8P28062 276 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 HOXD3P31249 432 aaPredicted RBP4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 MYCNOSP40205 109 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 ZNF503Q96F45 646 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 PKD1L2Q7Z442 2459 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 TRBV30A0A0K0K1B3 111 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 EBI3Q14213 229 aa4.76□□□□□ -1.65
PRPF4B-205ENST00000480058 UNQ6494/PRO21346Q6UXR6 183 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms