RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TMSB15BA0A087X1C1 80 aa18.8■□□□□ 0.6
CCM2-211ENST00000478582 GRIFINA4D1Z8 144 aa18.8■□□□□ 0.6
CCM2-211ENST00000478582 CEBPGP53567 150 aa18.8■□□□□ 0.6
CCM2-211ENST00000478582 CLLU1Q5K131 121 aa18.8■□□□□ 0.6
CCM2-211ENST00000478582 PIK3CD-AS1Q5SR53 167 aa18.8■□□□□ 0.6
CCM2-211ENST00000478582 TMEM88Q6PEY1 159 aa18.8■□□□□ 0.6
CCM2-211ENST00000478582 DAZAP1Q96EP5 407 aaKnown RBP18.8■□□□□ 0.6
CCM2-211ENST00000478582 LY96Q9Y6Y9 160 aa18.8■□□□□ 0.6
CCM2-211ENST00000478582 ARMS2P0C7Q2 107 aa18.79■□□□□ 0.6
CCM2-211ENST00000478582 RPL19P84098 196 aaKnown RBP18.79■□□□□ 0.6
CCM2-211ENST00000478582 SRSF3P84103 164 aaKnown RBP18.79■□□□□ 0.6
CCM2-211ENST00000478582 ZNF876PQ49A33 203 aa18.79■□□□□ 0.6
CCM2-211ENST00000478582 SCRT2Q9NQ03 307 aa18.79■□□□□ 0.6
CCM2-211ENST00000478582 C9JQL5 133 aa18.78■□□□□ 0.6
CCM2-211ENST00000478582 H3BVH4 76 aa18.78■□□□□ 0.6
CCM2-211ENST00000478582 MED14OSP0DP75 135 aa18.78■□□□□ 0.6
CCM2-211ENST00000478582 POM121L12Q8N7R1 296 aa18.78■□□□□ 0.6
CCM2-211ENST00000478582 SMIM7Q9BQ49 75 aa18.78■□□□□ 0.6
CCM2-211ENST00000478582 TRAV4A0A0B4J268 109 aa18.77■□□□□ 0.6
CCM2-211ENST00000478582 K7EN84 100 aa18.77■□□□□ 0.6
CCM2-211ENST00000478582 ZNF727A8MUV8 499 aa18.76■□□□□ 0.59
CCM2-211ENST00000478582 C15orf53Q8NAA6 179 aa18.76■□□□□ 0.59
CCM2-211ENST00000478582 P01737 135 aa18.75■□□□□ 0.59
CCM2-211ENST00000478582 IGHV3-53P01767 116 aa18.75■□□□□ 0.59
CCM2-211ENST00000478582 FHL2Q14192 279 aa18.75■□□□□ 0.59
CCM2-211ENST00000478582 FAM74A3Q4VXF1 159 aa18.75■□□□□ 0.59
CCM2-211ENST00000478582 OR4C5Q8NGB2 326 aa18.75■□□□□ 0.59
CCM2-211ENST00000478582 ZNF479Q96JC4 524 aa18.75■□□□□ 0.59
CCM2-211ENST00000478582 MUC4Q99102 2169 aa18.75■□□□□ 0.59
CCM2-211ENST00000478582 H3BNG1 76 aa18.74■□□□□ 0.59
CCM2-211ENST00000478582 RS1O15537 224 aa18.74■□□□□ 0.59
CCM2-211ENST00000478582 RPS20P60866 119 aaKnown RBP18.74■□□□□ 0.59
CCM2-211ENST00000478582 SLAQ13239 276 aa18.74■□□□□ 0.59
CCM2-211ENST00000478582 NUDT10Q8NFP7 164 aa18.74■□□□□ 0.59
CCM2-211ENST00000478582 NUDT11Q96G61 164 aa18.74■□□□□ 0.59
CCM2-211ENST00000478582 SSBP4Q9BWG4 385 aaPredicted RBP18.74■□□□□ 0.59
CCM2-211ENST00000478582 TRAV26-1A0A087WT03 109 aa18.73■□□□□ 0.59
CCM2-211ENST00000478582 CIDEAO60543 219 aa18.73■□□□□ 0.59
CCM2-211ENST00000478582 OR2D3Q8NGH3 330 aa18.73■□□□□ 0.59
CCM2-211ENST00000478582 PHLDA3Q9Y5J5 127 aa18.73■□□□□ 0.59
CCM2-211ENST00000478582 SNAI2O43623 268 aa18.72■□□□□ 0.59
CCM2-211ENST00000478582 OR5AL1P0C617 328 aa18.72■□□□□ 0.59
CCM2-211ENST00000478582 SFTA3P0C7M3 94 aa18.72■□□□□ 0.59
CCM2-211ENST00000478582 CFAP126Q5VTH2 177 aa18.72■□□□□ 0.59
CCM2-211ENST00000478582 SYT8Q8NBV8 401 aa18.72■□□□□ 0.59
CCM2-211ENST00000478582 DMRTA1Q5VZB9 504 aa18.71■□□□□ 0.59
CCM2-211ENST00000478582 FAM231DQ6ZW35 169 aa18.71■□□□□ 0.59
CCM2-211ENST00000478582 LINC01551Q86U37 167 aa18.71■□□□□ 0.59
CCM2-211ENST00000478582 PRO0255Q9UI72 69 aa18.71■□□□□ 0.59
CCM2-211ENST00000478582 XKRY2A2RUG3 117 aa18.7■□□□□ 0.58
CCM2-211ENST00000478582 A8MWV9 139 aa18.7■□□□□ 0.58
CCM2-211ENST00000478582 ZFP82Q8N141 532 aa18.7■□□□□ 0.58
CCM2-211ENST00000478582 VSIG2Q96IQ7 327 aa18.7■□□□□ 0.58
CCM2-211ENST00000478582 RNASE7Q9H1E1 156 aaKnown RBP18.7■□□□□ 0.58
CCM2-211ENST00000478582 HHLA3Q9XRX5 114 aa18.7■□□□□ 0.58
CCM2-211ENST00000478582 TRGV4A0A0C4DH28 118 aa18.69■□□□□ 0.58
CCM2-211ENST00000478582 TMEM241Q24JQ0 296 aa18.69■□□□□ 0.58
CCM2-211ENST00000478582 A0A0J9YY99 117 aa18.68■□□□□ 0.58
CCM2-211ENST00000478582 NXPH4O95158 308 aa18.68■□□□□ 0.58
CCM2-211ENST00000478582 IGLC6P0CF74 106 aa18.68■□□□□ 0.58
CCM2-211ENST00000478582 CRYBA4P53673 196 aa18.68■□□□□ 0.58
CCM2-211ENST00000478582 RPP21Q9H633 154 aaKnown RBP18.68■□□□□ 0.58
CCM2-211ENST00000478582 SOHLH1Q5JUK2 328 aa18.67■□□□□ 0.58
CCM2-211ENST00000478582 M0R381 172 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 PAX4O43316 350 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 NUDT3O95989 172 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 GZMBP10144 247 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 ZFP2Q6ZN57 461 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 OR10AG1Q8NH19 301 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 SFRP2Q96HF1 295 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 NAT8Q9UHE5 227 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 KMT2AQ03164 3969 aa18.66■□□□□ 0.58
CCM2-211ENST00000478582 P0DMU3 169 aa18.65■□□□□ 0.58
CCM2-211ENST00000478582 FAM231AP0DMU4 169 aa18.65■□□□□ 0.58
CCM2-211ENST00000478582 FAM231CP0DMU5 169 aa18.65■□□□□ 0.58
CCM2-211ENST00000478582 GATA1P15976 413 aaPredicted RBP18.65■□□□□ 0.58
CCM2-211ENST00000478582 FER1L6-AS1Q8NA97 138 aa18.65■□□□□ 0.58
CCM2-211ENST00000478582 GATCO43716 136 aaKnown RBP18.64■□□□□ 0.57
CCM2-211ENST00000478582 ERVFC1-1P60608 527 aa18.64■□□□□ 0.57
CCM2-211ENST00000478582 UFSP1Q6NVU6 142 aa18.64■□□□□ 0.57
CCM2-211ENST00000478582 JPT2Q9H910 190 aa18.64■□□□□ 0.57
CCM2-211ENST00000478582 VPS13DQ5THJ4 4388 aa18.64■□□□□ 0.57
CCM2-211ENST00000478582 EPPK1P58107 5090 aaKnown RBP18.64■□□□□ 0.57
CCM2-211ENST00000478582 A0A1W2PPQ1 181 aa18.63■□□□□ 0.57
CCM2-211ENST00000478582 F2Z2F3 143 aa18.63■□□□□ 0.57
CCM2-211ENST00000478582 RPL23P62829 140 aaKnown RBP18.63■□□□□ 0.57
CCM2-211ENST00000478582 OSTCQ9NRP0 149 aa18.63■□□□□ 0.57
CCM2-211ENST00000478582 CT83Q5H943 113 aa18.62■□□□□ 0.57
CCM2-211ENST00000478582 NACAE9PAV3 2078 aa18.62■□□□□ 0.57
CCM2-211ENST00000478582 TRBV6-4A0A1B0GX49 114 aa18.61■□□□□ 0.57
CCM2-211ENST00000478582 SPANXN1Q5VSR9 72 aa18.61■□□□□ 0.57
CCM2-211ENST00000478582 ISOC2Q96AB3 205 aa18.61■□□□□ 0.57
CCM2-211ENST00000478582 SAMD10Q9BYL1 202 aa18.61■□□□□ 0.57
CCM2-211ENST00000478582 A0A096LPF7 62 aa18.6■□□□□ 0.57
CCM2-211ENST00000478582 RHODO00212 210 aa18.6■□□□□ 0.57
CCM2-211ENST00000478582 CRYGDP07320 174 aa18.6■□□□□ 0.57
CCM2-211ENST00000478582 RNF212Q495C1 297 aa18.6■□□□□ 0.57
CCM2-211ENST00000478582 ICOSQ9Y6W8 199 aa18.6■□□□□ 0.57
CCM2-211ENST00000478582 IGHV3-73A0A0B4J1V6 119 aa18.59■□□□□ 0.57
CCM2-211ENST00000478582 A8MWL6 223 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms