RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TEX48A0A1B0GUV7 120 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 PLAC8L1A1L4L8 177 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 XKRY2A2RUG3 117 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 C19orf71A6NCJ1 209 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 FABP5P3A8MUU1 101 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 A8MWL6 223 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 DEFB130BP0DP73 79 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 DEFB130AP0DP74 79 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 TSPOP30536 169 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 LEPP41159 167 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 RPS20P60866 119 aaKnown RBP5.87□□□□□ -1.47
HDAC6-221ENST00000477561 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 TMEM256Q8N2U0 113 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 C8orf49Q96NF6 230 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 NDUFAF3Q9BU61 184 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 URGCP-MRPS24S4R325 110 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 DNAH2Q9P225 4427 aa5.87□□□□□ -1.47
HDAC6-221ENST00000477561 TRBV24-1A0A075B6N3 115 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 FAM231BA6NCW3 169 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 COLCA2A8K830 154 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 LYRM9A8MSI8 78 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 SH2D1AO60880 128 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 PFN1P07737 140 aaKnown RBP5.86□□□□□ -1.47
HDAC6-221ENST00000477561 CRISP2P16562 243 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 ELOBQ15370 118 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 OR2D3Q8NGH3 330 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 TSKUQ8WUA8 353 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 GFRA4Q9GZZ7 299 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 NOP10Q9NPE3 64 aaKnown RBP5.86□□□□□ -1.47
HDAC6-221ENST00000477561 NAT8BQ9UHF3 227 aa5.86□□□□□ -1.47
HDAC6-221ENST00000477561 TRAV21A0A0B4J279 112 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 A0A1W2PPQ1 181 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 SMIM27A0A1W2PRY6 76 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 GPX1P07203 203 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 RAB5AP20339 215 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 RNASE4P34096 147 aaKnown RBP5.85□□□□□ -1.47
HDAC6-221ENST00000477561 CRIP1P50238 77 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 Q6AWC8 147 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 C16orf74Q96GX8 76 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 FAM210BQ96KR6 192 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 FAM19A4Q96LR4 140 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 YPEL4Q96NS1 127 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 DNAH6Q9C0G6 4158 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 BIRC6Q9NR09 4857 aa5.85□□□□□ -1.47
HDAC6-221ENST00000477561 FRAS1Q86XX4 4008 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 TGIF2-C20orf24A0A0A6YYL0 155 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 C7orf71A4D174 169 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 F5H768 121 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 FAM3BP58499 235 aaPredicted RBP5.84□□□□□ -1.47
HDAC6-221ENST00000477561 COX19Q49B96 90 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 PRR9Q5T870 116 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 Q6ZQT7 251 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 ZNF493Q6ZR52 646 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 ZFAND2AQ8N6M9 145 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 RNASE8Q8TDE3 154 aaKnown RBP5.84□□□□□ -1.47
HDAC6-221ENST00000477561 TMEM263Q8WUH6 116 aaKnown RBP5.84□□□□□ -1.47
HDAC6-221ENST00000477561 C20orf144Q9BQM9 153 aa5.84□□□□□ -1.47
HDAC6-221ENST00000477561 TIMM8BQ9Y5J9 83 aaPredicted RBP5.84□□□□□ -1.47
HDAC6-221ENST00000477561 GAGE12BA1L429 117 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 CBY3A6NI87 242 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 HIGD1CA8MV81 97 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 SNURFLB1AK76 121 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 KLLNB2CW77 178 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 M0R2N4 97 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 ZNF324O75467 553 aaPredicted RBP5.83□□□□□ -1.48
HDAC6-221ENST00000477561 GAGE7O76087 117 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 ORM1P02763 201 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 TYMSP04818 313 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 ATP5G1P05496 136 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 CXCL1P09341 107 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 GAGE12FP0CL80 117 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 GAGE12GP0CL81 117 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 GAGE12IP0CL82 117 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 P0DMU3 169 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 FAM231AP0DMU4 169 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 FAM231CP0DMU5 169 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 RPS10P46783 165 aaKnown RBP5.83□□□□□ -1.48
HDAC6-221ENST00000477561 ZNF80P51504 273 aaPredicted RBP5.83□□□□□ -1.48
HDAC6-221ENST00000477561 TCL1AP56279 114 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 RASL11AQ6T310 242 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 UBE2DNLQ8IWF7 75 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 BORCS7Q96B45 105 aa5.83□□□□□ -1.48
HDAC6-221ENST00000477561 FOXA3P55318 350 aaPredicted RBP5.82□□□□□ -1.48
HDAC6-221ENST00000477561 WDR73Q6P4I2 378 aa5.82□□□□□ -1.48
HDAC6-221ENST00000477561 ATP5L2Q7Z4Y8 100 aa5.82□□□□□ -1.48
HDAC6-221ENST00000477561 NUP35Q8NFH5 326 aa5.82□□□□□ -1.48
HDAC6-221ENST00000477561 GSN-AS1Q9NRJ2 163 aa5.82□□□□□ -1.48
HDAC6-221ENST00000477561 IGLV2-18A0A075B6J9 118 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 TMSB15BA0A087X1C1 80 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 A0A1B0GW15 77 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 C1orf196B1AJZ1 125 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 NUDT3O95989 172 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 MT-ND6P03923 174 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 S100A8P05109 93 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 RAB5BP61020 215 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 TNP2Q05952 138 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 RIGQ13278 110 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 Q6ZTI0 123 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms