RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 MED9Q9NWA0 146 aa10.69□□□□□ -0.7
SRRT-209ENST00000474896 ZNF324O75467 553 aaPredicted RBP10.68□□□□□ -0.7
SRRT-209ENST00000474896 NXPH4O95158 308 aa10.68□□□□□ -0.7
SRRT-209ENST00000474896 RNASE4P34096 147 aaKnown RBP10.68□□□□□ -0.7
SRRT-209ENST00000474896 RPL35P42766 123 aaKnown RBP10.68□□□□□ -0.7
SRRT-209ENST00000474896 XGP55808 180 aa10.68□□□□□ -0.7
SRRT-209ENST00000474896 SAPCD1Q5SSQ6 148 aa10.68□□□□□ -0.7
SRRT-209ENST00000474896 C8orf49Q96NF6 230 aa10.68□□□□□ -0.7
SRRT-209ENST00000474896 TMEM250H0YL14 139 aa10.67□□□□□ -0.7
SRRT-209ENST00000474896 PAX4O43316 350 aa10.67□□□□□ -0.7
SRRT-209ENST00000474896 NDUFS6O75380 124 aaKnown RBP10.67□□□□□ -0.7
SRRT-209ENST00000474896 LTAP01374 205 aa10.67□□□□□ -0.7
SRRT-209ENST00000474896 EIF4E3Q8N5X7 224 aaKnown RBP10.67□□□□□ -0.7
SRRT-209ENST00000474896 ZFP30Q9Y2G7 519 aa10.67□□□□□ -0.7
SRRT-209ENST00000474896 SPINK4O60575 86 aa10.66□□□□□ -0.7
SRRT-209ENST00000474896 IGHV3-53P01767 116 aa10.66□□□□□ -0.7
SRRT-209ENST00000474896 ERVFC1-1P60608 527 aa10.66□□□□□ -0.7
SRRT-209ENST00000474896 ANXA2RQ3ZCQ2 193 aa10.66□□□□□ -0.7
SRRT-209ENST00000474896 LINC00467Q9BRT7 94 aa10.66□□□□□ -0.7
SRRT-209ENST00000474896 ICOSQ9Y6W8 199 aa10.66□□□□□ -0.7
SRRT-209ENST00000474896 GCGP01275 180 aa10.65□□□□□ -0.7
SRRT-209ENST00000474896 SRP19P09132 144 aaKnown RBP10.65□□□□□ -0.7
SRRT-209ENST00000474896 SRSF3P84103 164 aaKnown RBP10.65□□□□□ -0.7
SRRT-209ENST00000474896 PEA15Q15121 130 aa10.65□□□□□ -0.7
SRRT-209ENST00000474896 SMUG1Q53HV7 270 aa10.65□□□□□ -0.7
SRRT-209ENST00000474896 CENPWQ5EE01 88 aa10.65□□□□□ -0.7
SRRT-209ENST00000474896 Q6AWC8 147 aa10.65□□□□□ -0.7
SRRT-209ENST00000474896 CDPF1Q6NVV7 123 aa10.65□□□□□ -0.7
SRRT-209ENST00000474896 Q6ZQT7 251 aa10.65□□□□□ -0.7
SRRT-209ENST00000474896 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
SRRT-209ENST00000474896 RAB19A4D1S5 217 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 ZNF80P51504 273 aaPredicted RBP10.64□□□□□ -0.71
SRRT-209ENST00000474896 CEBPGP53567 150 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 TCL1AP56279 114 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 COX8CQ7Z4L0 72 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 TMEM183AQ8IXX5 376 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 NHLRC2Q8NBF2 726 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 ZC2HC1AQ96GY0 325 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 PARLQ9H300 379 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 SMDT1Q9H4I9 107 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 TP53TG3Q9ULZ0 132 aa10.64□□□□□ -0.71
SRRT-209ENST00000474896 TRBV20OR9-2A0A075B6H5 130 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 TRAV21A0A0B4J279 112 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 C9JQL5 133 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 GNG4P50150 75 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 KRTAP10-1P60331 282 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 ZNF674Q2M3X9 581 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 Q5VSD8 79 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 NFE4Q86UQ8 179 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 MLST8Q9BVC4 326 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
SRRT-209ENST00000474896 PRO0255Q9UI72 69 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 HHLA3Q9XRX5 114 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 HERC1Q15751 4861 aa10.63□□□□□ -0.71
SRRT-209ENST00000474896 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
SRRT-209ENST00000474896 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
SRRT-209ENST00000474896 A0A087WTM6 91 aa10.62□□□□□ -0.71
SRRT-209ENST00000474896 PFN1P07737 140 aaKnown RBP10.62□□□□□ -0.71
SRRT-209ENST00000474896 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
SRRT-209ENST00000474896 CRYBA4P53673 196 aa10.62□□□□□ -0.71
SRRT-209ENST00000474896 SLAQ13239 276 aa10.62□□□□□ -0.71
SRRT-209ENST00000474896 MRPL23Q16540 153 aaKnown RBP10.62□□□□□ -0.71
SRRT-209ENST00000474896 IBA57Q5T440 356 aaKnown RBP10.62□□□□□ -0.71
SRRT-209ENST00000474896 FRZBQ92765 325 aa10.62□□□□□ -0.71
SRRT-209ENST00000474896 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
SRRT-209ENST00000474896 C9JCJ5 164 aa10.61□□□□□ -0.71
SRRT-209ENST00000474896 IGLV2-8P01709 118 aa10.61□□□□□ -0.71
SRRT-209ENST00000474896 CRIP1P50238 77 aa10.61□□□□□ -0.71
SRRT-209ENST00000474896 FHL2Q14192 279 aa10.61□□□□□ -0.71
SRRT-209ENST00000474896 MUC21Q5SSG8 566 aa10.61□□□□□ -0.71
SRRT-209ENST00000474896 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
SRRT-209ENST00000474896 PGPEP1LA6NFU8 196 aa10.6□□□□□ -0.71
SRRT-209ENST00000474896 FABP5P3A8MUU1 101 aa10.6□□□□□ -0.71
SRRT-209ENST00000474896 SH2D1AO60880 128 aa10.6□□□□□ -0.71
SRRT-209ENST00000474896 FAM162BQ5T6X4 162 aa10.6□□□□□ -0.71
SRRT-209ENST00000474896 NEGR1Q7Z3B1 354 aa10.6□□□□□ -0.71
SRRT-209ENST00000474896 SMIM7Q9BQ49 75 aa10.6□□□□□ -0.71
SRRT-209ENST00000474896 NAGKQ9UJ70 344 aa10.6□□□□□ -0.71
SRRT-209ENST00000474896 LY96Q9Y6Y9 160 aa10.6□□□□□ -0.71
SRRT-209ENST00000474896 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
SRRT-209ENST00000474896 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
SRRT-209ENST00000474896 MGST1P10620 155 aaKnown RBP10.59□□□□□ -0.71
SRRT-209ENST00000474896 PRR27Q6MZM9 219 aa10.59□□□□□ -0.71
SRRT-209ENST00000474896 FAM159AQ6UWV7 190 aa10.59□□□□□ -0.71
SRRT-209ENST00000474896 MSRB1Q9NZV6 116 aa10.59□□□□□ -0.71
SRRT-209ENST00000474896 C11orf21Q9P2W6 132 aa10.59□□□□□ -0.71
SRRT-209ENST00000474896 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
SRRT-209ENST00000474896 LINC00862A6NCI5 91 aa10.58□□□□□ -0.72
SRRT-209ENST00000474896 TDRG1Q3Y452 100 aa10.58□□□□□ -0.72
SRRT-209ENST00000474896 COMMD7Q86VX2 200 aa10.58□□□□□ -0.72
SRRT-209ENST00000474896 MDFICQ9P1T7 246 aa10.58□□□□□ -0.72
SRRT-209ENST00000474896 K7EQD1 137 aa10.57□□□□□ -0.72
SRRT-209ENST00000474896 GCSHP23434 173 aa10.57□□□□□ -0.72
SRRT-209ENST00000474896 FAM74A3Q4VXF1 159 aa10.57□□□□□ -0.72
SRRT-209ENST00000474896 WFDC10BQ8IUB3 73 aa10.57□□□□□ -0.72
SRRT-209ENST00000474896 OCC1Q8TAD7 63 aa10.57□□□□□ -0.72
SRRT-209ENST00000474896 KCNS1Q96KK3 526 aa10.57□□□□□ -0.72
SRRT-209ENST00000474896 SDF2L1Q9HCN8 221 aa10.57□□□□□ -0.72
SRRT-209ENST00000474896 FAT1Q14517 4588 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms