RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 TOMM6Q96B49 74 aa12.41□□□□□ -0.42
TPR-205ENST00000474852 IGHV4-4A0A075B6R2 117 aa12.4□□□□□ -0.42
TPR-205ENST00000474852 PRSS29PA6NIE9 313 aa12.4□□□□□ -0.42
TPR-205ENST00000474852 SLC25A16P16260 332 aa12.4□□□□□ -0.42
TPR-205ENST00000474852 SRSF9Q13242 221 aaKnown RBP eCLIP12.4□□□□□ -0.42
TPR-205ENST00000474852 IGHV3OR16-10A0A075B7F0 116 aa12.4□□□□□ -0.43
TPR-205ENST00000474852 LINC01549A6NIU2 74 aa12.4□□□□□ -0.43
TPR-205ENST00000474852 SIRPDQ9H106 197 aa12.4□□□□□ -0.43
TPR-205ENST00000474852 APOMO95445 188 aa12.39□□□□□ -0.43
TPR-205ENST00000474852 GNRH2O43555 120 aa12.39□□□□□ -0.43
TPR-205ENST00000474852 MT-ATP8P03928 68 aa12.39□□□□□ -0.43
TPR-205ENST00000474852 ANXA2RQ3ZCQ2 193 aa12.39□□□□□ -0.43
TPR-205ENST00000474852 TRBV12-3P01733 135 aa12.38□□□□□ -0.43
TPR-205ENST00000474852 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
TPR-205ENST00000474852 RNASE4P34096 147 aaKnown RBP12.38□□□□□ -0.43
TPR-205ENST00000474852 UNQ9165/PRO28630Q6UXU0 137 aa12.38□□□□□ -0.43
TPR-205ENST00000474852 AJUBAQ96IF1 538 aa12.38□□□□□ -0.43
TPR-205ENST00000474852 CDIP1Q9H305 208 aa12.38□□□□□ -0.43
TPR-205ENST00000474852 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
TPR-205ENST00000474852 C11orf71Q6IPW1 123 aa12.38□□□□□ -0.43
TPR-205ENST00000474852 C1orf122Q6ZSJ8 110 aa12.38□□□□□ -0.43
TPR-205ENST00000474852 ZNF418Q8TF45 676 aaPredicted RBP12.38□□□□□ -0.43
TPR-205ENST00000474852 DPH3P1Q9H4G8 78 aa12.38□□□□□ -0.43
TPR-205ENST00000474852 ASIPP42127 132 aa12.37□□□□□ -0.43
TPR-205ENST00000474852 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
TPR-205ENST00000474852 TGFAP01135 160 aa12.37□□□□□ -0.43
TPR-205ENST00000474852 PSMB2P49721 201 aa12.37□□□□□ -0.43
TPR-205ENST00000474852 FOXC1Q12948 553 aa12.37□□□□□ -0.43
TPR-205ENST00000474852 FHL3Q13643 280 aa12.37□□□□□ -0.43
TPR-205ENST00000474852 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
TPR-205ENST00000474852 MUC4Q99102 2169 aa12.37□□□□□ -0.43
TPR-205ENST00000474852 TRBV7-1A0A0A6YYK4 115 aa12.36□□□□□ -0.43
TPR-205ENST00000474852 FOXI1Q12951 378 aa12.36□□□□□ -0.43
TPR-205ENST00000474852 NFE4Q86UQ8 179 aa12.36□□□□□ -0.43
TPR-205ENST00000474852 PTH2Q96A98 100 aa12.36□□□□□ -0.43
TPR-205ENST00000474852 MRPL53Q96EL3 112 aaKnown RBP12.36□□□□□ -0.43
TPR-205ENST00000474852 ARL3P36405 182 aa12.36□□□□□ -0.43
TPR-205ENST00000474852 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
TPR-205ENST00000474852 OR10J6PQ8NGY7 276 aa12.36□□□□□ -0.43
TPR-205ENST00000474852 RNF223E7ERA6 249 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 HIVEP3Q5T1R4 2406 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 A0A1W2PPR1 153 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 UBE2E1P51965 193 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 C9orf139Q6ZV77 190 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 GPHB5Q86YW7 130 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 U3KQE9 123 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 CENPVL3A0A0U1RRI6 287 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 IGHV3-11P01762 117 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 RNF183Q96D59 192 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 JPT2Q9H910 190 aa12.35□□□□□ -0.43
TPR-205ENST00000474852 XGP55808 180 aa12.34□□□□□ -0.43
TPR-205ENST00000474852 ADORA2A-AS1P86434 159 aa12.34□□□□□ -0.43
TPR-205ENST00000474852 TCF15Q12870 199 aa12.34□□□□□ -0.43
TPR-205ENST00000474852 ITLN2Q8WWU7 325 aaPredicted RBP12.34□□□□□ -0.43
TPR-205ENST00000474852 C11orf86A6NJI1 115 aa12.34□□□□□ -0.43
TPR-205ENST00000474852 TSPAN13O95857 204 aa12.34□□□□□ -0.43
TPR-205ENST00000474852 SRD5A1P18405 259 aa12.34□□□□□ -0.43
TPR-205ENST00000474852 FBXL19-AS1Q494R0 122 aa12.34□□□□□ -0.43
TPR-205ENST00000474852 DLX4Q92988 240 aaPredicted RBP12.34□□□□□ -0.43
TPR-205ENST00000474852 RPL39P62891 51 aaKnown RBP12.33□□□□□ -0.44
TPR-205ENST00000474852 TP53TG1Q9Y2A0 90 aa12.33□□□□□ -0.44
TPR-205ENST00000474852 C5orf56Q8N8D9 126 aa12.33□□□□□ -0.44
TPR-205ENST00000474852 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.444e-7■■■□□ 14.9
TPR-205ENST00000474852 TRAV41A0A0B4J266 112 aa12.32□□□□□ -0.44
TPR-205ENST00000474852 A6NJY4 79 aa12.32□□□□□ -0.44
TPR-205ENST00000474852 CRYGDP07320 174 aa12.32□□□□□ -0.44
TPR-205ENST00000474852 CFAP126Q5VTH2 177 aa12.32□□□□□ -0.44
TPR-205ENST00000474852 RNASE3P12724 160 aaKnown RBP12.32□□□□□ -0.44
TPR-205ENST00000474852 LINC00477Q96M19 166 aa12.32□□□□□ -0.44
TPR-205ENST00000474852 SS18L2Q9UHA2 77 aa12.32□□□□□ -0.44
TPR-205ENST00000474852 CRYBG3Q68DQ2 2970 aa12.32□□□□□ -0.44
TPR-205ENST00000474852 A0A087WWL8 130 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 LINC01619G3V211 115 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 COX6B1P14854 86 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 SPG11Q96JI7 2443 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 K7ENP7 123 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 TSHBP01222 138 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 Q6ZS46 218 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 SORL1Q92673 2214 aa12.31□□□□□ -0.44
TPR-205ENST00000474852 F5H697 171 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 NPFFO15130 113 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 TMEM170BQ5T4T1 132 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 BPESC1Q9GZL8 116 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 UBTD1Q9HAC8 227 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 UBE2D1P51668 147 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 BRD3OSQ6XYD6 125 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 Q6ZUT4 128 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 IGLV4-69A0A075B6H9 119 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
TPR-205ENST00000474852 TSPEAR-AS2P59090 65 aa12.29□□□□□ -0.44
TPR-205ENST00000474852 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
TPR-205ENST00000474852 CARD19Q96LW7 228 aa12.29□□□□□ -0.44
TPR-205ENST00000474852 ABCA2Q9BZC7 2435 aa12.28□□□□□ -0.44
TPR-205ENST00000474852 NCOR2Q9Y618 2525 aa12.28□□□□□ -0.44
TPR-205ENST00000474852 OVOL1O14753 267 aa12.28□□□□□ -0.44
TPR-205ENST00000474852 CD7P09564 240 aa12.28□□□□□ -0.44
TPR-205ENST00000474852 LY6EQ16553 131 aa12.28□□□□□ -0.44
TPR-205ENST00000474852 A0A0J9YY99 117 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms