RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 IL36RNQ9UBH0 155 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 TRAV17A0A0B4J275 112 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 TIMM17BO60830 172 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 SLC25A14O95258 325 aaPredicted RBP4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 LINC00205P59089 165 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 UPK3BQ9BT76 320 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 IGKV1-9A0A0C4DH69 117 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 HLA-DPB1P04440 258 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 PTHLHP12272 177 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 UBE2G1P62253 170 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 CCL20P78556 96 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 GUSBP11Q6P575 273 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 C5orf38Q86SI9 138 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 C17orf82Q86X59 251 aaPredicted RBP4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 DIRC1Q969H9 104 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF492Q9P255 531 aa4.5□□□□□ -1.69
SMARCE1-208ENST00000474246 C3orf79P0CE67 100 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 COX8AP10176 69 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 SS18Q15532 418 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 TWIST1Q15672 202 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 SERP2Q8N6R1 65 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 WFDC5Q8TCV5 224 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 KNL1Q8NG31 2342 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 TRBV6-7A0A0A0MS04 114 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 AQP1P29972 269 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 C12orf73Q69YU5 71 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 LINC01555Q8NAE3 123 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 C11orf52Q96A22 123 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 LINC01600Q96MT4 127 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 WWC2-AS2Q96NR7 200 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 POLEQ07864 2286 aa4.49□□□□□ -1.69
SMARCE1-208ENST00000474246 HCFC1P51610 2035 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 PIN1P1O15428 100 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 LTAP01374 205 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 IGLV3-19P01714 112 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 PRM2P04554 102 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF20P17024 532 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 ELK1P19419 428 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 SLURP1P55000 103 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 SCXQ7RTU7 201 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 CYB561D1Q8N8Q1 229 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 SLC25A29Q8N8R3 303 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 AQP3Q92482 292 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 ODF3Q96PU9 254 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 NPCDR1Q9BY65 106 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 Q9H3A6 140 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 NXT2Q9NPJ8 142 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 TRAPPC1Q9Y5R8 145 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 LOC285095A0A1B0GVY8 99 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 SERF1AO75920 110 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 ASAH2BP0C7U1 165 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 SNRPFP62306 86 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 TRGV9Q99603 122 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 IL36BQ9NZH7 164 aa4.48□□□□□ -1.69
SMARCE1-208ENST00000474246 IGHV3-20A0A0C4DH32 117 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 IGHV4-61A0A0C4DH41 118 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF736B4DX44 427 aaPredicted RBP4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 C9JCJ5 164 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 IGHV4-59P01825 116 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 RNASE4P34096 147 aaKnown RBP4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 PCBD1P61457 104 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 HIST1H4AP62805 103 aaKnown RBP4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 KLF9Q13886 244 aaPredicted RBP4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 PSMG4Q5JS54 123 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 Q6ZRM9 215 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 C2orf91Q6ZV80 131 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF714Q96N38 554 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 CXCL16Q9H2A7 254 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 MSRB1Q9NZV6 116 aa4.47□□□□□ -1.69
SMARCE1-208ENST00000474246 IGHV1OR15-1A0A075B7D0 117 aa4.46□□□□□ -1.69
SMARCE1-208ENST00000474246 UBE2AP49459 152 aa4.46□□□□□ -1.69
SMARCE1-208ENST00000474246 RSPO1Q2MKA7 263 aaPredicted RBP4.46□□□□□ -1.69
SMARCE1-208ENST00000474246 RPL7L1Q6DKI1 246 aaKnown RBP4.46□□□□□ -1.69
SMARCE1-208ENST00000474246 BAGE3Q86Y29 109 aa4.46□□□□□ -1.69
SMARCE1-208ENST00000474246 BAGE2Q86Y30 109 aa4.46□□□□□ -1.69
SMARCE1-208ENST00000474246 LY96Q9Y6Y9 160 aa4.46□□□□□ -1.69
SMARCE1-208ENST00000474246 IGLV3-10A0A075B6K4 115 aa4.46□□□□□ -1.7
SMARCE1-208ENST00000474246 IGHV3-43DP0DP04 118 aa4.46□□□□□ -1.7
SMARCE1-208ENST00000474246 IGHV1-2P23083 117 aa4.46□□□□□ -1.7
SMARCE1-208ENST00000474246 REG3AQ06141 175 aa4.46□□□□□ -1.7
SMARCE1-208ENST00000474246 INSL4Q14641 139 aa4.46□□□□□ -1.7
SMARCE1-208ENST00000474246 CD177Q8N6Q3 437 aa4.46□□□□□ -1.7
SMARCE1-208ENST00000474246 Q8N8P6 123 aa4.46□□□□□ -1.7
SMARCE1-208ENST00000474246 SPTSSAQ969W0 71 aa4.46□□□□□ -1.7
SMARCE1-208ENST00000474246 ACYP1P07311 99 aa4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 HERVK_113P61574 105 aa4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 CIRBPQ14011 172 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 KRTAP4-5Q9BYR2 181 aa4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 SCN8AQ9UQD0 1980 aa4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 F2Z2F3 143 aa4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 ZNF816Q0VGE8 651 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 RNASE6Q93091 150 aaKnown RBP4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 DKK2Q9UBU2 259 aa4.45□□□□□ -1.7
SMARCE1-208ENST00000474246 TP53TG3Q9ULZ0 132 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms