RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SFT2D1Q8WV19 159 aa12.25□□□□□ -0.45
UPF3A-203ENST00000474056 FMC1Q96HJ9 113 aa12.25□□□□□ -0.45
UPF3A-203ENST00000474056 ZFP30Q9Y2G7 519 aa12.25□□□□□ -0.45
UPF3A-203ENST00000474056 PFDN1O60925 122 aa12.24□□□□□ -0.45
UPF3A-203ENST00000474056 S100A4P26447 101 aaKnown RBP12.24□□□□□ -0.45
UPF3A-203ENST00000474056 AKR1C3P42330 323 aa12.24□□□□□ -0.45
UPF3A-203ENST00000474056 COX8CQ7Z4L0 72 aa12.24□□□□□ -0.45
UPF3A-203ENST00000474056 PTH2Q96A98 100 aa12.24□□□□□ -0.45
UPF3A-203ENST00000474056 TXNDC17Q9BRA2 123 aa12.24□□□□□ -0.45
UPF3A-203ENST00000474056 TCEAL7Q9BRU2 100 aa12.24□□□□□ -0.45
UPF3A-203ENST00000474056 B4DEV8 164 aa12.23□□□□□ -0.45
UPF3A-203ENST00000474056 SH2D1AO60880 128 aa12.23□□□□□ -0.45
UPF3A-203ENST00000474056 MED14OSP0DP75 135 aa12.23□□□□□ -0.45
UPF3A-203ENST00000474056 EIF5AP63241 154 aaKnown RBP12.23□□□□□ -0.45
UPF3A-203ENST00000474056 WFDC10BQ8IUB3 73 aa12.23□□□□□ -0.45
UPF3A-203ENST00000474056 SLC25A29Q8N8R3 303 aa12.23□□□□□ -0.45
UPF3A-203ENST00000474056 TRBV6-1A0A0K0K1D8 114 aa12.22□□□□□ -0.45
UPF3A-203ENST00000474056 M0R036 132 aa12.22□□□□□ -0.45
UPF3A-203ENST00000474056 LTAP01374 205 aa12.22□□□□□ -0.45
UPF3A-203ENST00000474056 TPT1P13693 172 aaKnown RBP12.22□□□□□ -0.45
UPF3A-203ENST00000474056 BTF3P20290 206 aaKnown RBP12.22□□□□□ -0.45
UPF3A-203ENST00000474056 ASIPP42127 132 aa12.22□□□□□ -0.45
UPF3A-203ENST00000474056 NHLRC2Q8NBF2 726 aa12.22□□□□□ -0.45
UPF3A-203ENST00000474056 SCO2A0A1W2PP80 73 aa12.21□□□□□ -0.45
UPF3A-203ENST00000474056 H3BVH4 76 aa12.21□□□□□ -0.45
UPF3A-203ENST00000474056 CIDEAO60543 219 aa12.21□□□□□ -0.45
UPF3A-203ENST00000474056 H2AFB1P0C5Y9 115 aa12.21□□□□□ -0.45
UPF3A-203ENST00000474056 RHOHQ15669 191 aa12.21□□□□□ -0.45
UPF3A-203ENST00000474056 ZNF674Q2M3X9 581 aa12.21□□□□□ -0.45
UPF3A-203ENST00000474056 FAM162BQ5T6X4 162 aa12.21□□□□□ -0.45
UPF3A-203ENST00000474056 Q6ZRN7 208 aaPredicted RBP12.21□□□□□ -0.45
UPF3A-203ENST00000474056 IL36BQ9NZH7 164 aa12.21□□□□□ -0.45
UPF3A-203ENST00000474056 TRBV6-4A0A1B0GX49 114 aa12.2□□□□□ -0.46
UPF3A-203ENST00000474056 GRIFINA4D1Z8 144 aa12.2□□□□□ -0.46
UPF3A-203ENST00000474056 KRBOX1C9JBD0 128 aa12.2□□□□□ -0.46
UPF3A-203ENST00000474056 PARLQ9H300 379 aa12.2□□□□□ -0.46
UPF3A-203ENST00000474056 TNFRSF18Q9Y5U5 241 aa12.2□□□□□ -0.46
UPF3A-203ENST00000474056 LY96Q9Y6Y9 160 aa12.2□□□□□ -0.46
UPF3A-203ENST00000474056 C16orf90A8MZG2 172 aa12.19□□□□□ -0.46
UPF3A-203ENST00000474056 LGALSLQ3ZCW2 172 aaPredicted RBP12.19□□□□□ -0.46
UPF3A-203ENST00000474056 LINC01559Q495D7 138 aa12.19□□□□□ -0.46
UPF3A-203ENST00000474056 DNLZQ5SXM8 178 aa12.19□□□□□ -0.46
UPF3A-203ENST00000474056 SH2D6Q7Z4S9 175 aa12.19□□□□□ -0.46
UPF3A-203ENST00000474056 PRADC1Q9BSG0 188 aa12.19□□□□□ -0.46
UPF3A-203ENST00000474056 JPT2Q9H910 190 aa12.19□□□□□ -0.46
UPF3A-203ENST00000474056 TMSB15BA0A087X1C1 80 aa12.18□□□□□ -0.46
UPF3A-203ENST00000474056 ARMS2P0C7Q2 107 aa12.18□□□□□ -0.46
UPF3A-203ENST00000474056 MGST1P10620 155 aaKnown RBP12.18□□□□□ -0.46
UPF3A-203ENST00000474056 PIK3CD-AS1Q5SR53 167 aa12.18□□□□□ -0.46
UPF3A-203ENST00000474056 SPATA12Q7Z6I5 190 aa12.18□□□□□ -0.46
UPF3A-203ENST00000474056 TCTE3Q8IZS6 198 aa12.18□□□□□ -0.46
UPF3A-203ENST00000474056 A8MWV9 139 aa12.17□□□□□ -0.46
UPF3A-203ENST00000474056 TIRAPP58753 221 aa12.17□□□□□ -0.46
UPF3A-203ENST00000474056 DMRTA1Q5VZB9 504 aa12.17□□□□□ -0.46
UPF3A-203ENST00000474056 Q6ZSN1 163 aa12.17□□□□□ -0.46
UPF3A-203ENST00000474056 SAMD10Q9BYL1 202 aa12.17□□□□□ -0.46
UPF3A-203ENST00000474056 DNAH10OSP0CZ25 163 aa12.16□□□□□ -0.46
UPF3A-203ENST00000474056 CCL20P78556 96 aa12.16□□□□□ -0.46
UPF3A-203ENST00000474056 UFSP1Q6NVU6 142 aa12.16□□□□□ -0.46
UPF3A-203ENST00000474056 ZFP2Q6ZN57 461 aa12.16□□□□□ -0.46
UPF3A-203ENST00000474056 Q6ZNX1 250 aa12.16□□□□□ -0.46
UPF3A-203ENST00000474056 APOBP04114 4563 aaKnown RBP12.15□□□□□ -0.46
UPF3A-203ENST00000474056 TRAV9-2A0A087WT02 112 aa12.15□□□□□ -0.46
UPF3A-203ENST00000474056 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
UPF3A-203ENST00000474056 EVI2AP22794 236 aa12.15□□□□□ -0.46
UPF3A-203ENST00000474056 KRTAP10-2P60368 255 aa12.15□□□□□ -0.46
UPF3A-203ENST00000474056 SCRT2Q9NQ03 307 aa12.15□□□□□ -0.46
UPF3A-203ENST00000474056 HSPG2P98160 4391 aa12.15□□□□□ -0.46
UPF3A-203ENST00000474056 SULT1A2P50226 295 aa12.14□□□□□ -0.47
UPF3A-203ENST00000474056 BAGE2Q86Y30 109 aa12.14□□□□□ -0.47
UPF3A-203ENST00000474056 SYT8Q8NBV8 401 aa12.14□□□□□ -0.47
UPF3A-203ENST00000474056 MLST8Q9BVC4 326 aa12.14□□□□□ -0.47
UPF3A-203ENST00000474056 MANBALQ9NQG1 85 aa12.14□□□□□ -0.47
UPF3A-203ENST00000474056 GNG13Q9P2W3 67 aa12.14□□□□□ -0.47
UPF3A-203ENST00000474056 PHLDA3Q9Y5J5 127 aa12.14□□□□□ -0.47
UPF3A-203ENST00000474056 TRAV1-1A0A0B4J248 108 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 C1QBP02746 253 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 CRYGDP07320 174 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 LINC00694P0DN24 101 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 RAB5CP51148 216 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 RPL19P84098 196 aaKnown RBP12.13□□□□□ -0.47
UPF3A-203ENST00000474056 C14orf178Q8N769 122 aaPredicted RBP12.13□□□□□ -0.47
UPF3A-203ENST00000474056 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 MSRB1Q9NZV6 116 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 Q9UF83 564 aa12.13□□□□□ -0.47
UPF3A-203ENST00000474056 GAGE12JA6NER3 117 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 K7EP13 123 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 M0R381 172 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 GAGE1Q13065 139 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 GAGE4Q13068 117 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 GAGE5Q13069 117 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 GAGE13Q4V321 117 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 OR10J3Q5JRS4 329 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 FAM74A4Q5TZK3 123 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 EIF5AL1Q6IS14 154 aaKnown RBP12.12□□□□□ -0.47
UPF3A-203ENST00000474056 NFE4Q86UQ8 179 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 C10orf126Q8N4M7 172 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 SFRP2Q96HF1 295 aa12.12□□□□□ -0.47
UPF3A-203ENST00000474056 DERL1Q9BUN8 251 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms