RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CTDSP1Q9GZU7 261 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 MDFICQ9P1T7 246 aa9.25□□□□□ -0.93
TPM3-216ENST00000473036 TIMM8BQ9Y5J9 83 aaPredicted RBP9.25□□□□□ -0.93
TPM3-216ENST00000473036 CBY3A6NI87 242 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 A8MWL6 223 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 M0R036 132 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 APOC3P02656 99 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 ORM1P02763 201 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 CXCL1P09341 107 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 CRIP1P50238 77 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 DAD1P61803 113 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 DAZ2Q13117 558 aaKnown RBP9.24□□□□□ -0.93
TPM3-216ENST00000473036 CT83Q5H943 113 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 LGALS9CQ6DKI2 356 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 Q6ZTI0 123 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 NHLRC2Q8NBF2 726 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 ISOC2Q96AB3 205 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 TMEM242Q9NWH2 141 aa9.24□□□□□ -0.93
TPM3-216ENST00000473036 MUC4Q99102 2169 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 TRGV11A0A075B6L2 103 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 IGHV4-4A0A075B6R2 117 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 C19orf71A6NCJ1 209 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 FAM231BA6NCW3 169 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 GNRH2O43555 120 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 GATCO43716 136 aaKnown RBP9.23□□□□□ -0.93
TPM3-216ENST00000473036 SH2D1AO60880 128 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 RPL19P84098 196 aaKnown RBP9.23□□□□□ -0.93
TPM3-216ENST00000473036 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 ZNF575Q86XF7 245 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 OR10G8Q8NGN5 311 aa9.23□□□□□ -0.93
TPM3-216ENST00000473036 PKD1P98161 4303 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 A0A087WWC5 75 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 TEX48A0A1B0GUV7 120 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 A0A1W2PPQ1 181 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 PGPEP1LA6NFU8 196 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 K7EN84 100 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 SPINK4O60575 86 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 HTN3P15516 51 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 ADCYAP1P18509 176 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 TCL1AP56279 114 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 OR5I1Q13606 314 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 CLRN3Q8NCR9 226 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 NUDT10Q8NFP7 164 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 NUDT11Q96G61 164 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 GFRA4Q9GZZ7 299 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
TPM3-216ENST00000473036 RYR1P21817 5038 aa9.22□□□□□ -0.93
TPM3-216ENST00000473036 NACAE9PAV3 2078 aa9.21□□□□□ -0.93
TPM3-216ENST00000473036 IGHV3-16A0A0C4DH30 117 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 GAGE12BA1L429 117 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 SNURFLB1AK76 121 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 GAGE7O76087 117 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 TYMSP04818 313 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 GAGE12FP0CL80 117 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 GAGE12GP0CL81 117 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 GAGE12IP0CL82 117 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 HOXA5P20719 270 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 OR2D3Q8NGH3 330 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 IMMP2LQ96T52 175 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 NAGKQ9UJ70 344 aa9.21□□□□□ -0.94
TPM3-216ENST00000473036 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
TPM3-216ENST00000473036 F2Z2F3 143 aa9.2□□□□□ -0.94
TPM3-216ENST00000473036 S100A4P26447 101 aaKnown RBP9.2□□□□□ -0.94
TPM3-216ENST00000473036 ASIPP42127 132 aa9.2□□□□□ -0.94
TPM3-216ENST00000473036 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
TPM3-216ENST00000473036 TMEM88Q6PEY1 159 aa9.2□□□□□ -0.94
TPM3-216ENST00000473036 BTF3L4Q96K17 158 aa9.2□□□□□ -0.94
TPM3-216ENST00000473036 RNASE7Q9H1E1 156 aaKnown RBP9.2□□□□□ -0.94
TPM3-216ENST00000473036 DYNC1H1Q14204 4646 aaKnown RBP9.2□□□□□ -0.94
TPM3-216ENST00000473036 TRGV1A0A0A0MS02 117 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 MED14OSP0DP75 135 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 S100PP25815 95 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 TCTAP57738 103 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 TSKUQ8WUA8 353 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 BORCS7Q96B45 105 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 SPXQ9BT56 116 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 NDUFAF3Q9BU61 184 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 MRPL16Q9NX20 251 aaKnown RBP9.19□□□□□ -0.94
TPM3-216ENST00000473036 PKHD1P08F94 4074 aa9.19□□□□□ -0.94
TPM3-216ENST00000473036 C7orf77A4D0Y5 90 aa9.18□□□□□ -0.94
TPM3-216ENST00000473036 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
TPM3-216ENST00000473036 RNF212Q495C1 297 aa9.18□□□□□ -0.94
TPM3-216ENST00000473036 WDR73Q6P4I2 378 aa9.18□□□□□ -0.94
TPM3-216ENST00000473036 KCNIP4Q6PIL6 250 aa9.18□□□□□ -0.94
TPM3-216ENST00000473036 POM121L12Q8N7R1 296 aa9.18□□□□□ -0.94
TPM3-216ENST00000473036 C18orf15Q96N68 181 aa9.18□□□□□ -0.94
TPM3-216ENST00000473036 F5H768 121 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 ATP5G1P05496 136 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 ZNF415Q09FC8 603 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 PIK3CD-AS1Q5SR53 167 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 RPS10P5Q9NQ39 176 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 IL36BQ9NZH7 164 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 NAT8BQ9UHF3 227 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 V9GYV3 84 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 DNAH5Q8TE73 4624 aa9.17□□□□□ -0.94
TPM3-216ENST00000473036 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
TPM3-216ENST00000473036 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
TPM3-216ENST00000473036 ATP6V1G1O75348 118 aa9.16□□□□□ -0.94
TPM3-216ENST00000473036 OR5AL1P0C617 328 aa9.16□□□□□ -0.94
TPM3-216ENST00000473036 RNASE3P12724 160 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms