RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 ATG5Q9H1Y0 275 aa1.34□□□□□ -2.19
CLTC-204ENST00000472129 SIP14410 1827 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 PTPRGP23470 1445 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 DAPK1P53355 1430 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 BCL9LQ86UU0 1499 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.33□□□□□ -2.2
CLTC-204ENST00000472129 IGKV2-29A2NJV5 120 aaPredicted RBP1.33□□□□□ -2.2
CLTC-204ENST00000472129 LINC00587B1AMM8 73 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 CORTO00230 105 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 HCRTO43612 131 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 KLF7O75840 302 aaPredicted RBP1.33□□□□□ -2.2
CLTC-204ENST00000472129 SNCGO76070 127 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 NDUFB6O95139 128 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 DNAL4O96015 105 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 PPYP01298 95 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 IGF2P01344 180 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 GNG4P50150 75 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 Q56UQ5 140 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 OCIAD2Q56VL3 154 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 ZCCHC23Q6ZST2 131 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 ZFP30Q9Y2G7 519 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 ANK1P16157 1881 aa1.33□□□□□ -2.2
CLTC-204ENST00000472129 KTN1Q86UP2 1357 aaKnown RBP1.33□□□□□ -2.2
CLTC-204ENST00000472129 ATG2AQ2TAZ0 1938 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 ALPK3Q96L96 1907 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 KIAA0100Q14667 2235 aaKnown RBP1.32□□□□□ -2.2
CLTC-204ENST00000472129 ZNF518AQ6AHZ1 1483 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 KIDINS220Q9ULH0 1771 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 TRBV10-1A0A0K0K1A3 114 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 HIGD1CA8MV81 97 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 APOC4-APOC2K7ER74 178 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 TNFP01375 233 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 IFNA17P01571 189 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 APOC2P02655 101 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 IL5P05113 134 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 PDE6GP18545 87 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 TMEM242Q9NWH2 141 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 IER3IP1Q9Y5U9 82 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 SYNJ1O43426 1573 aa1.32□□□□□ -2.2
CLTC-204ENST00000472129 SNRNP200O75643 2136 aaKnown RBP1.31□□□□□ -2.2
CLTC-204ENST00000472129 ZGRF1Q86YA3 2104 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 PRRC2BQ5JSZ5 2229 aaKnown RBP1.31□□□□□ -2.2
CLTC-204ENST00000472129 PTPRDP23468 1912 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 WDR97A6NE52 1622 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 TRAV17A0A0B4J275 112 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 C20orf202A1L168 122 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 ZNF25P17030 456 aaPredicted RBP1.31□□□□□ -2.2
CLTC-204ENST00000472129 TPPP2P59282 170 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 LYPD5Q6UWN5 251 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 ZNF625Q96I27 306 aaPredicted RBP1.31□□□□□ -2.2
CLTC-204ENST00000472129 TMEM141Q96I45 108 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 PPP3R2Q96LZ3 170 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 AGPAT4-IT1Q9H0P7 198 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 SCN3BQ9NY72 215 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 MRPL35Q9NZE8 188 aaKnown RBP1.31□□□□□ -2.2
CLTC-204ENST00000472129 MRPL36Q9P0J6 103 aaKnown RBP1.31□□□□□ -2.2
CLTC-204ENST00000472129 SERP1Q9Y6X1 66 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 ERBINQ96RT1 1412 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 TRPM7Q96QT4 1865 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 CFTRP13569 1480 aa1.31□□□□□ -2.2
CLTC-204ENST00000472129 EML5Q05BV3 1969 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 ADGRB1O14514 1584 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 KDM6BO15054 1643 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 TRAV23DV6A0A075B6W5 121 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 TEX49A0A1B0GTD5 131 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 NUPR2A6NF83 97 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 MIC13Q5XKP0 118 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 GTF2H5Q6ZYL4 71 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 SEC11CQ9BY50 192 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 WFDC10AQ9H1F0 79 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 RPRMQ9NS64 109 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 C22orf24Q9Y442 160 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 AKAP11Q9UKA4 1901 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 MCM3APO60318 1980 aa1.3□□□□□ -2.2
CLTC-204ENST00000472129 KMT2BQ9UMN6 2715 aaPredicted RBP1.3□□□□□ -2.2
CLTC-204ENST00000472129 KIF13AQ9H1H9 1805 aa1.29□□□□□ -2.2
CLTC-204ENST00000472129 TNRC6BQ9UPQ9 1833 aaKnown RBP1.29□□□□□ -2.2
CLTC-204ENST00000472129 SNAPC5O75971 98 aa1.29□□□□□ -2.2
CLTC-204ENST00000472129 PIRTP0C851 137 aa1.29□□□□□ -2.2
CLTC-204ENST00000472129 CBLN1P23435 193 aa1.29□□□□□ -2.2
CLTC-204ENST00000472129 PPP3R1P63098 170 aa1.29□□□□□ -2.2
CLTC-204ENST00000472129 C8orf59Q8N0T1 100 aaPredicted RBP1.29□□□□□ -2.2
CLTC-204ENST00000472129 ASCC3Q8N3C0 2202 aaKnown RBP1.29□□□□□ -2.2
CLTC-204ENST00000472129 MAPKBP1O60336 1514 aa1.29□□□□□ -2.2
CLTC-204ENST00000472129 HELZ2Q9BYK8 2649 aaKnown RBP1.29□□□□□ -2.2
CLTC-204ENST00000472129 SPTBP11277 2137 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 MED12Q93074 2177 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 MED13Q9UHV7 2174 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 MCRIP1C9JLW8 97 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 IL7P13232 177 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 Q6AWC8 147 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 SLC48A1Q6P1K1 146 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 C15orf53Q8NAA6 179 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 C10orf105Q8TEF2 133 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 C12orf57Q99622 126 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 CASP8AP2Q9UKL3 1982 aa1.28□□□□□ -2.2
CLTC-204ENST00000472129 TET1Q8NFU7 2136 aa1.27□□□□□ -2.21
CLTC-204ENST00000472129 FOCADQ5VW36 1801 aa1.27□□□□□ -2.21
CLTC-204ENST00000472129 CXorf51AA0A1B0GTR3 108 aa1.27□□□□□ -2.21
CLTC-204ENST00000472129 M0R129 80 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms