RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 RNASE6Q93091 150 aaKnown RBP10.54□□□□□ -0.72
NPHP4-207ENST00000470763 RPL39LQ96EH5 51 aaKnown RBP10.54□□□□□ -0.72
NPHP4-207ENST00000470763 CTSGP08311 255 aa10.54□□□□□ -0.72
NPHP4-207ENST00000470763 GAGE5Q13069 117 aa10.54□□□□□ -0.72
NPHP4-207ENST00000470763 GAGE6Q13070 117 aa10.54□□□□□ -0.72
NPHP4-207ENST00000470763 NDUFA11Q86Y39 141 aa10.54□□□□□ -0.72
NPHP4-207ENST00000470763 IGHV3-49A0A0A0MS15 119 aa10.53□□□□□ -0.72
NPHP4-207ENST00000470763 SCGB1C2P0DMR2 95 aa10.53□□□□□ -0.72
NPHP4-207ENST00000470763 UTP20O75691 2785 aaKnown RBP10.53□□□□□ -0.72
NPHP4-207ENST00000470763 J3QKU1 62 aa10.53□□□□□ -0.72
NPHP4-207ENST00000470763 TOMM6Q96B49 74 aa10.53□□□□□ -0.72
NPHP4-207ENST00000470763 M0R381 172 aa10.53□□□□□ -0.72
NPHP4-207ENST00000470763 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
NPHP4-207ENST00000470763 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
NPHP4-207ENST00000470763 OR11H6Q8NGC7 330 aa10.53□□□□□ -0.72
NPHP4-207ENST00000470763 HECTD1Q9ULT8 2610 aa10.52□□□□□ -0.72
NPHP4-207ENST00000470763 TRBV20-1A0A075B6N2 111 aa10.52□□□□□ -0.73
NPHP4-207ENST00000470763 Q6ZS46 218 aa10.52□□□□□ -0.73
NPHP4-207ENST00000470763 COX6B1P14854 86 aa10.52□□□□□ -0.73
NPHP4-207ENST00000470763 HIF1ANQ9NWT6 349 aa10.52□□□□□ -0.73
NPHP4-207ENST00000470763 LRRK2Q5S007 2527 aa10.52□□□□□ -0.73
NPHP4-207ENST00000470763 NHLRC4P0CG21 123 aaPredicted RBP10.51□□□□□ -0.73
NPHP4-207ENST00000470763 SUMO2P61956 95 aaKnown RBP10.51□□□□□ -0.73
NPHP4-207ENST00000470763 ORMDL2Q53FV1 153 aa10.51□□□□□ -0.73
NPHP4-207ENST00000470763 AJUBAQ96IF1 538 aa10.51□□□□□ -0.73
NPHP4-207ENST00000470763 LY6LH3BQJ8 138 aa10.51□□□□□ -0.73
NPHP4-207ENST00000470763 LYRM7Q5U5X0 104 aa10.51□□□□□ -0.73
NPHP4-207ENST00000470763 CFC1BP0CG36 223 aa10.51□□□□□ -0.73
NPHP4-207ENST00000470763 CFC1P0CG37 223 aa10.51□□□□□ -0.73
NPHP4-207ENST00000470763 CRIP2P52943 208 aaPredicted RBP10.51□□□□□ -0.73
NPHP4-207ENST00000470763 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.51□□□□□ -0.73
NPHP4-207ENST00000470763 RNF5Q99942 180 aa10.51□□□□□ -0.73
NPHP4-207ENST00000470763 RAX2Q96IS3 184 aa10.5□□□□□ -0.73
NPHP4-207ENST00000470763 USP9XQ93008 2570 aaPredicted RBP10.5□□□□□ -0.73
NPHP4-207ENST00000470763 TRAV8-2A0A0B4J237 113 aa10.5□□□□□ -0.73
NPHP4-207ENST00000470763 A0A0J9YY99 117 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 C9JAW5 83 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 H7C2G1 150 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 MGPP08493 103 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 TRPT1Q86TN4 253 aaKnown RBP10.49□□□□□ -0.73
NPHP4-207ENST00000470763 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-207ENST00000470763 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 C11orf86A6NJI1 115 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 CRLF1O75462 422 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 CITED1Q99966 193 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 DUSP14O95147 198 aaKnown RBP10.49□□□□□ -0.73
NPHP4-207ENST00000470763 PRR9Q5T870 116 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 SLC50A1Q9BRV3 221 aa10.49□□□□□ -0.73
NPHP4-207ENST00000470763 PTPN13Q12923 2485 aa10.48□□□□□ -0.73
NPHP4-207ENST00000470763 SLC25A20O43772 301 aa10.48□□□□□ -0.73
NPHP4-207ENST00000470763 IGF1P05019 195 aa10.48□□□□□ -0.73
NPHP4-207ENST00000470763 NBPF19A0A087WUL8 3843 aa10.48□□□□□ -0.73
NPHP4-207ENST00000470763 CCDC179H3BU77 68 aa10.48□□□□□ -0.73
NPHP4-207ENST00000470763 TSPEAR-AS2P59090 65 aa10.48□□□□□ -0.73
NPHP4-207ENST00000470763 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
NPHP4-207ENST00000470763 C10orf126Q8N4M7 172 aa10.48□□□□□ -0.73
NPHP4-207ENST00000470763 BUB3O43684 328 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 VCX2Q9H322 139 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 TMEM262E9PQX1 116 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 CRYGDP07320 174 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 HERV-K104P63124 156 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 DPM3Q9P2X0 92 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 E7EQL1 145 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 IGHV3-30P01768 117 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 IGHV3-30-5P0DP03 117 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 KLRB1Q12918 225 aa10.47□□□□□ -0.73
NPHP4-207ENST00000470763 RBAKDNA6NC62 111 aa10.46□□□□□ -0.73
NPHP4-207ENST00000470763 SNCGO76070 127 aa10.46□□□□□ -0.73
NPHP4-207ENST00000470763 NPBQ8NG41 125 aa10.46□□□□□ -0.73
NPHP4-207ENST00000470763 A0A0G2JNJ9 132 aa10.46□□□□□ -0.74
NPHP4-207ENST00000470763 NDUFV3P56181 108 aaKnown RBP10.46□□□□□ -0.74
NPHP4-207ENST00000470763 SMIM20Q8N5G0 67 aa10.46□□□□□ -0.74
NPHP4-207ENST00000470763 Q9UFV3 132 aa10.46□□□□□ -0.74
NPHP4-207ENST00000470763 PRO1854Q9UHT4 67 aa10.46□□□□□ -0.74
NPHP4-207ENST00000470763 RHODO00212 210 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 CLEC3BP05452 202 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 ARL3P36405 182 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 IGLV4-69A0A075B6H9 119 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 RNF223E7ERA6 249 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 SRD5A1P18405 259 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 C15orf32Q32M92 178 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 TMEM170BQ5T4T1 132 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 SCGB2A1O75556 95 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 S100A4P26447 101 aaKnown RBP10.45□□□□□ -0.74
NPHP4-207ENST00000470763 NTN5Q8WTR8 489 aaPredicted RBP10.45□□□□□ -0.74
NPHP4-207ENST00000470763 ZFAND3Q9H8U3 227 aa10.45□□□□□ -0.74
NPHP4-207ENST00000470763 USP9YO00507 2555 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-207ENST00000470763 SPTBN1Q01082 2364 aaKnown RBP10.44□□□□□ -0.74
NPHP4-207ENST00000470763 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
NPHP4-207ENST00000470763 TSHBP01222 138 aa10.44□□□□□ -0.74
NPHP4-207ENST00000470763 DEFB1P60022 68 aa10.44□□□□□ -0.74
NPHP4-207ENST00000470763 HERVK_113P61574 105 aa10.44□□□□□ -0.74
NPHP4-207ENST00000470763 RPL39P62891 51 aaKnown RBP10.44□□□□□ -0.74
NPHP4-207ENST00000470763 C1orf122Q6ZSJ8 110 aa10.44□□□□□ -0.74
NPHP4-207ENST00000470763 TP53TG1Q9Y2A0 90 aa10.44□□□□□ -0.74
NPHP4-207ENST00000470763 LY6HO94772 140 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms