RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 A0A087WX48 190 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 IGHV1-3A0A0C4DH29 117 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 MYMXA0A1B0GTQ4 84 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 ATP5LO75964 103 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 SMAD5-AS1Q9Y6J3 95 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 IGHV3-49A0A0A0MS15 119 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 IGKV3D-20A0A0C4DH25 116 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 TCL1BO95988 128 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 DLX6P56179 175 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 Q8N8P6 123 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 MAPK1IP1LQ8NDC0 245 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 NRGNQ92686 78 aa6.13□□□□□ -1.43
TPM3-215ENST00000469717 DLX4Q92988 240 aaPredicted RBP6.13□□□□□ -1.43
TPM3-215ENST00000469717 NHLRC4P0CG21 123 aaPredicted RBP6.12□□□□□ -1.43
TPM3-215ENST00000469717 PRTN3P24158 256 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 CRIP2P52943 208 aaPredicted RBP6.12□□□□□ -1.43
TPM3-215ENST00000469717 NRACQ8N912 160 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 GAGE12JA6NER3 117 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 SHISA9B4DS77 424 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 GAGE7O76087 117 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 GAGE12FP0CL80 117 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 GAGE12GP0CL81 117 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 GAGE12IP0CL82 117 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 GAGE4Q13068 117 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 TMEM78Q5T7P6 136 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 SCGB1D4Q6XE38 83 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 PRADC1Q9BSG0 188 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 ZNF815PA8K554 130 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 SLC25A16P16260 332 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 SRSF9Q13242 221 aaKnown RBP eCLIP6.12□□□□□ -1.43
TPM3-215ENST00000469717 LAGE3Q14657 143 aa6.12□□□□□ -1.43
TPM3-215ENST00000469717 SMIM9A6NGZ8 99 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 F8W735 103 aaPredicted RBP6.11□□□□□ -1.43
TPM3-215ENST00000469717 CRLF1O75462 422 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 LYPD1Q8N2G4 141 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 ANKRD29Q8N6D5 301 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 TMEM178BH3BS89 294 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 TMEM155Q4W5P6 130 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 Q6ZS46 218 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 C3orf56Q8N813 242 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 FAM215AQ9Y5M1 114 aa6.11□□□□□ -1.43
TPM3-215ENST00000469717 TEP1Q99973 2627 aaKnown RBP6.11□□□□□ -1.43
TPM3-215ENST00000469717 LINC01546A6NGU7 62 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 C17orf100A8MU93 164 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 F8VRH5 84 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 CCDC179H3BU77 68 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 H7C2G1 150 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 TAL2Q16559 108 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 LINC00311Q8N616 119 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 RPL39LQ96EH5 51 aaKnown RBP6.1□□□□□ -1.43
TPM3-215ENST00000469717 TIMM23O14925 209 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 TMEM30BQ3MIR4 351 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 RASL10AQ92737 203 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 TRAV4A0A0B4J268 109 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 FABP5P3A8MUU1 101 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 TRPT1Q86TN4 253 aaKnown RBP6.1□□□□□ -1.43
TPM3-215ENST00000469717 TEN1Q86WV5 123 aa6.1□□□□□ -1.43
TPM3-215ENST00000469717 BUB1B-PAK6H3BSN5 160 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 IGLV1-47P01700 117 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 IGF1P05019 195 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 DEFB1P60022 68 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 NDPQ00604 133 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 FANCD2OSQ96PS1 177 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 SCGB3A1Q96QR1 104 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 PPDPFLQ8WWR9 84 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 CNFNQ9BYD5 112 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 H7C1H1 209 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 CD7P09564 240 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 PLNP26678 52 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 UBE2D1P51668 147 aa6.09□□□□□ -1.43
TPM3-215ENST00000469717 IGHV7-4-1A0A0J9YVY3 117 aa6.09□□□□□ -1.44
TPM3-215ENST00000469717 THBDP07204 575 aa6.09□□□□□ -1.44
TPM3-215ENST00000469717 UBE2D3P61077 147 aa6.09□□□□□ -1.44
TPM3-215ENST00000469717 UBE2D2P62837 147 aa6.09□□□□□ -1.44
TPM3-215ENST00000469717 PDE6HQ13956 83 aa6.09□□□□□ -1.44
TPM3-215ENST00000469717 HRNRQ86YZ3 2850 aaPredicted RBP6.08□□□□□ -1.44
TPM3-215ENST00000469717 ELANEP08246 267 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 ZFAND6Q6FIF0 208 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 C2CD3Q4AC94 2353 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 M0R381 172 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 TSPEAR-AS2P59090 65 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 SPANXN1Q5VSR9 72 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 NDUFA11Q86Y39 141 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 TEX29Q8N6K0 151 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 RNASE6Q93091 150 aaKnown RBP6.08□□□□□ -1.44
TPM3-215ENST00000469717 SORL1Q92673 2214 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 ZNF688P0C7X2 276 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 HIST2H2BCQ6DN03 193 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 ATP6V0E2Q8NHE4 81 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 BAALCQ8WXS3 180 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 AGPAT4-IT1Q9H0P7 198 aa6.08□□□□□ -1.44
TPM3-215ENST00000469717 MBD3L4A6NDZ8 208 aaPredicted RBP6.07□□□□□ -1.44
TPM3-215ENST00000469717 MBD3L3A6NE82 208 aaPredicted RBP6.07□□□□□ -1.44
TPM3-215ENST00000469717 MBD3L5A6NJ08 208 aaPredicted RBP6.07□□□□□ -1.44
TPM3-215ENST00000469717 C9JAW5 83 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 CFC1P0CG37 223 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 SCGB1C2P0DMR2 95 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 PRR9Q5T870 116 aa6.07□□□□□ -1.44
TPM3-215ENST00000469717 NEXN-AS1Q8NBZ9 246 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms