RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 TP73-AS1Q9UF72 201 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 MUC21A0A0G2JKD1 596 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 MUC21A0A140T8X8 626 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 hDV102S1A0JD36 115 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 J3KRW8 73 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 CD28P10747 220 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 RNF151Q2KHN1 245 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 MUC21Q5SSG8 566 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 ZNF575Q86XF7 245 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 GATD1Q8NB37 220 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 FN1P02751 2386 aaKnown RBP10.87□□□□□ -0.67
HDAC6-213ENST00000462730 NDUFA7O95182 113 aa10.87□□□□□ -0.67
HDAC6-213ENST00000462730 ZFAND2AQ8N6M9 145 aa10.87□□□□□ -0.67
HDAC6-213ENST00000462730 HSPB8Q9UJY1 196 aa10.87□□□□□ -0.67
HDAC6-213ENST00000462730 IGKV3D-20A0A0C4DH25 116 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 K7ERU9 68 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 ZNF688P0C7X2 276 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 ADAMTSL5Q6ZMM2 481 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 Q6ZQT7 251 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 MAP1LC3CQ9BXW4 147 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 K7EQG2 157 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 MPV17L2Q567V2 206 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 FAM19A4Q96LR4 140 aa10.86□□□□□ -0.67
HDAC6-213ENST00000462730 A0A1W2PRX2 142 aa10.85□□□□□ -0.67
HDAC6-213ENST00000462730 SNRPD3P62318 126 aaKnown RBP10.85□□□□□ -0.67
HDAC6-213ENST00000462730 WFDC12Q8WWY7 111 aa10.85□□□□□ -0.67
HDAC6-213ENST00000462730 CITED2Q99967 270 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-213ENST00000462730 CRLF1O75462 422 aa10.85□□□□□ -0.67
HDAC6-213ENST00000462730 SEC11AP67812 179 aa10.85□□□□□ -0.67
HDAC6-213ENST00000462730 BVES-AS1Q5T3Y7 98 aa10.85□□□□□ -0.67
HDAC6-213ENST00000462730 ZNF493Q6ZR52 646 aa10.85□□□□□ -0.67
HDAC6-213ENST00000462730 PEMTQ9UBM1 199 aa10.85□□□□□ -0.67
HDAC6-213ENST00000462730 BAHCC1Q9P281 2608 aa10.84□□□□□ -0.67
HDAC6-213ENST00000462730 TAX1BP3O14907 124 aa10.84□□□□□ -0.67
HDAC6-213ENST00000462730 RNASE4P34096 147 aaKnown RBP10.84□□□□□ -0.67
HDAC6-213ENST00000462730 TWIST1Q15672 202 aa10.84□□□□□ -0.67
HDAC6-213ENST00000462730 OR9G4Q8NGQ1 327 aa10.84□□□□□ -0.67
HDAC6-213ENST00000462730 DLX4Q92988 240 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-213ENST00000462730 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
HDAC6-213ENST00000462730 TRAV21A0A0B4J279 112 aa10.83□□□□□ -0.68
HDAC6-213ENST00000462730 TRBV7-9A0A0J9YWB2 115 aa10.83□□□□□ -0.68
HDAC6-213ENST00000462730 CSN3P07498 182 aa10.83□□□□□ -0.68
HDAC6-213ENST00000462730 PROK1P58294 105 aa10.83□□□□□ -0.68
HDAC6-213ENST00000462730 OCIAD2Q56VL3 154 aa10.83□□□□□ -0.68
HDAC6-213ENST00000462730 RAX2Q96IS3 184 aa10.83□□□□□ -0.68
HDAC6-213ENST00000462730 CST9LQ9H4G1 147 aa10.83□□□□□ -0.68
HDAC6-213ENST00000462730 TSSC4Q9Y5U2 329 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-213ENST00000462730 SETXQ7Z333 2677 aaKnown RBP10.83□□□□□ -0.68
HDAC6-213ENST00000462730 MCRIP2Q9BUT9 160 aaKnown RBP10.83□□□□□ -0.68
HDAC6-213ENST00000462730 AP5S1Q9NUS5 200 aa10.83□□□□□ -0.68
HDAC6-213ENST00000462730 H0Y8G0 127 aa10.82□□□□□ -0.68
HDAC6-213ENST00000462730 NUDT3O95989 172 aa10.82□□□□□ -0.68
HDAC6-213ENST00000462730 KIR3DS1Q14943 382 aa10.82□□□□□ -0.68
HDAC6-213ENST00000462730 LINC01545Q5VT33 79 aa10.82□□□□□ -0.68
HDAC6-213ENST00000462730 APRG1Q8IVJ8 170 aa10.82□□□□□ -0.68
HDAC6-213ENST00000462730 CNFNQ9BYD5 112 aa10.82□□□□□ -0.68
HDAC6-213ENST00000462730 SETD2Q9BYW2 2564 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-213ENST00000462730 FHL3Q13643 280 aa10.81□□□□□ -0.68
HDAC6-213ENST00000462730 FAM104BQ5XKR9 115 aa10.81□□□□□ -0.68
HDAC6-213ENST00000462730 AMN1Q8IY45 258 aa10.81□□□□□ -0.68
HDAC6-213ENST00000462730 MSRB1Q9NZV6 116 aa10.81□□□□□ -0.68
HDAC6-213ENST00000462730 A0A0J9YX75 114 aa10.81□□□□□ -0.68
HDAC6-213ENST00000462730 GTF2H5Q6ZYL4 71 aa10.81□□□□□ -0.68
HDAC6-213ENST00000462730 DYNLRB2Q8TF09 96 aa10.81□□□□□ -0.68
HDAC6-213ENST00000462730 TIMM8BQ9Y5J9 83 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-213ENST00000462730 F8P00451 2351 aa10.81□□□□□ -0.68
HDAC6-213ENST00000462730 ZNF747Q9BV97 191 aa10.8□□□□□ -0.68
HDAC6-213ENST00000462730 KLLNB2CW77 178 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 H3BVH4 76 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 CCL24O00175 119 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 LEPP41159 167 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 ANXA2RQ3ZCQ2 193 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 OR10AG1Q8NH19 301 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 D6R8Y8 96 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 IGKV3-20P01619 116 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 COX8AP10176 69 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 MRPL51Q4U2R6 128 aaKnown RBP10.79□□□□□ -0.68
HDAC6-213ENST00000462730 FA2HQ7L5A8 372 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 PRSS3P2Q8NHM4 247 aa10.79□□□□□ -0.68
HDAC6-213ENST00000462730 SNAI2O43623 268 aa10.78□□□□□ -0.68
HDAC6-213ENST00000462730 ERASQ7Z444 233 aa10.78□□□□□ -0.68
HDAC6-213ENST00000462730 TMEM61Q8N0U2 210 aa10.78□□□□□ -0.68
HDAC6-213ENST00000462730 ODF3Q96PU9 254 aa10.78□□□□□ -0.68
HDAC6-213ENST00000462730 U3KQK5 164 aa10.78□□□□□ -0.68
HDAC6-213ENST00000462730 A6NDN8 102 aa10.77□□□□□ -0.68
HDAC6-213ENST00000462730 CYSRT1A8MQ03 144 aa10.77□□□□□ -0.68
HDAC6-213ENST00000462730 DUSP14O95147 198 aaKnown RBP10.77□□□□□ -0.68
HDAC6-213ENST00000462730 ASIPP42127 132 aa10.77□□□□□ -0.68
HDAC6-213ENST00000462730 FOXI2Q6ZQN5 318 aa10.77□□□□□ -0.68
HDAC6-213ENST00000462730 CLUHP3Q96NS8 147 aa10.77□□□□□ -0.68
HDAC6-213ENST00000462730 TRAV2A0A0B4J234 112 aa10.77□□□□□ -0.69
HDAC6-213ENST00000462730 ADARB2-AS1A8MUL3 147 aa10.77□□□□□ -0.69
HDAC6-213ENST00000462730 SIVA1O15304 175 aa10.77□□□□□ -0.69
HDAC6-213ENST00000462730 NCR2O95944 276 aa10.77□□□□□ -0.69
HDAC6-213ENST00000462730 KRTAP10-3P60369 221 aa10.77□□□□□ -0.69
HDAC6-213ENST00000462730 CACNG7P62955 275 aa10.77□□□□□ -0.69
HDAC6-213ENST00000462730 ORMDL3Q8N138 153 aa10.77□□□□□ -0.69
HDAC6-213ENST00000462730 PRELID3AQ96N28 172 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms