RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 WFDC10BQ8IUB3 73 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 NHLRC2Q8NBF2 726 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 FAM213BQ8TBF2 198 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 FMC1Q96HJ9 113 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 IGKV3D-20A0A0C4DH25 116 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 A0A0D9SG52 128 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 UMAD1C9J7I0 102 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 RS1O15537 224 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 S100A4P26447 101 aaKnown RBP6.94□□□□□ -1.3
SF3A3-204ENST00000462258 ASIPP42127 132 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 AKR1C3P42330 323 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 CST9LP1Q5W188 147 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 ZC2HC1AQ96GY0 325 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 LY96Q9Y6Y9 160 aa6.94□□□□□ -1.3
SF3A3-204ENST00000462258 IGHV3-73A0A0B4J1V6 119 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 A0A1B0GV50 99 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 PGPEP1LA6NFU8 196 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 FABP5P3A8MUU1 101 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 B4DEV8 164 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 H3BVH4 76 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 M0R036 132 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 CIDEAO60543 219 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 SH2D1AO60880 128 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 PFDN1O60925 122 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 Q6ZRN7 208 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-204ENST00000462258 SH2D6Q7Z4S9 175 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 SPATA12Q7Z6I5 190 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 SLC25A29Q8N8R3 303 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 PTH2Q96A98 100 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 PRADC1Q9BSG0 188 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
SF3A3-204ENST00000462258 TRBV6-1A0A0K0K1D8 114 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 TRBV6-4A0A1B0GX49 114 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 PAGE4O60829 102 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 LTAP01374 205 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 DNAH10OSP0CZ25 163 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 MGST1P10620 155 aaKnown RBP6.92□□□□□ -1.3
SF3A3-204ENST00000462258 TPT1P13693 172 aaKnown RBP6.92□□□□□ -1.3
SF3A3-204ENST00000462258 EIF5AP63241 154 aaKnown RBP6.92□□□□□ -1.3
SF3A3-204ENST00000462258 PIK3CD-AS1Q5SR53 167 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 FAM162BQ5T6X4 162 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 COX8CQ7Z4L0 72 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 SFT2D1Q8WV19 159 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 PARLQ9H300 379 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 IL36BQ9NZH7 164 aa6.92□□□□□ -1.3
SF3A3-204ENST00000462258 TRAV9-2A0A087WT02 112 aa6.91□□□□□ -1.3
SF3A3-204ENST00000462258 A8MWV9 139 aa6.91□□□□□ -1.3
SF3A3-204ENST00000462258 KRBOX1C9JBD0 128 aa6.91□□□□□ -1.3
SF3A3-204ENST00000462258 EVI2AP22794 236 aa6.91□□□□□ -1.3
SF3A3-204ENST00000462258 CRIP1P50238 77 aa6.91□□□□□ -1.3
SF3A3-204ENST00000462258 TIRAPP58753 221 aa6.91□□□□□ -1.3
SF3A3-204ENST00000462258 LGALSLQ3ZCW2 172 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-204ENST00000462258 NFE4Q86UQ8 179 aa6.91□□□□□ -1.3
SF3A3-204ENST00000462258 TMSB15BA0A087X1C1 80 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 SCO2A0A1W2PP80 73 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 K7EP13 123 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 CRYGDP07320 174 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 H2AFB1P0C5Y9 115 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 KRTAP10-2P60368 255 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 ERVFC1-1P60608 527 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 ZNF674Q2M3X9 581 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 DNLZQ5SXM8 178 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 ZFP2Q6ZN57 461 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 TMUB2Q71RG4 321 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 C10orf126Q8N4M7 172 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.3
SF3A3-204ENST00000462258 IGHV3-38A0A0C4DH36 116 aa6.89□□□□□ -1.31
SF3A3-204ENST00000462258 GRIFINA4D1Z8 144 aa6.89□□□□□ -1.31
SF3A3-204ENST00000462258 RHODO00212 210 aa6.89□□□□□ -1.31
SF3A3-204ENST00000462258 CDK2AP2O75956 126 aa6.89□□□□□ -1.31
SF3A3-204ENST00000462258 ARMS2P0C7Q2 107 aa6.89□□□□□ -1.31
SF3A3-204ENST00000462258 OR10J3Q5JRS4 329 aa6.89□□□□□ -1.31
SF3A3-204ENST00000462258 JPT2Q9H910 190 aa6.89□□□□□ -1.31
SF3A3-204ENST00000462258 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
SF3A3-204ENST00000462258 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 GAGE12JA6NER3 117 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 J3QL48 77 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 M0R381 172 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 EREGO14944 169 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 S100A9P06702 114 aaKnown RBP6.88□□□□□ -1.31
SF3A3-204ENST00000462258 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 GAGE1Q13065 139 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 GAGE4Q13068 117 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 GAGE5Q13069 117 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 GAGE13Q4V321 117 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 LINC01556Q5JQF7 62 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 LELP1Q5T871 98 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 FAM74A4Q5TZK3 123 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 UFSP1Q6NVU6 142 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 TCTE3Q8IZS6 198 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 SAMD10Q9BYL1 202 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 KRTAP17-1Q9BYP8 105 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 SCRT2Q9NQ03 307 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 MANBALQ9NQG1 85 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 PHLDA3Q9Y5J5 127 aa6.88□□□□□ -1.31
SF3A3-204ENST00000462258 EIF5AL1Q6IS14 154 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms