RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 PTH2Q96A98 100 aa10.37□□□□□ -0.75
ATG4B-213ENST00000460211 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
ATG4B-213ENST00000460211 CRIP1P50238 77 aa10.36□□□□□ -0.75
ATG4B-213ENST00000460211 ESRGQ1W209 222 aa10.36□□□□□ -0.75
ATG4B-213ENST00000460211 ZNF674Q2M3X9 581 aa10.36□□□□□ -0.75
ATG4B-213ENST00000460211 DNAH17Q9UFH2 4485 aa10.36□□□□□ -0.75
ATG4B-213ENST00000460211 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
ATG4B-213ENST00000460211 M0R036 132 aa10.35□□□□□ -0.75
ATG4B-213ENST00000460211 RNASE3P12724 160 aaKnown RBP10.35□□□□□ -0.75
ATG4B-213ENST00000460211 Q6ZR54 194 aa10.35□□□□□ -0.75
ATG4B-213ENST00000460211 Q9H8V8 135 aa10.35□□□□□ -0.75
ATG4B-213ENST00000460211 IL36BQ9NZH7 164 aa10.35□□□□□ -0.75
ATG4B-213ENST00000460211 KRBOX1C9JBD0 128 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 PDE6DO43924 150 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 MED14OSP0DP75 135 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 SRIP30626 198 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 TAGLN2P37802 199 aaKnown RBP10.34□□□□□ -0.75
ATG4B-213ENST00000460211 PIK3CD-AS1Q5SR53 167 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 NEGR1Q7Z3B1 354 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 SYT8Q8NBV8 401 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 UPK3BQ9BT76 320 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
ATG4B-213ENST00000460211 NACAE9PAV3 2078 aa10.34□□□□□ -0.75
ATG4B-213ENST00000460211 NBDYA0A0U1RRE5 68 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 PGPEP1LA6NFU8 196 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 A8MWV9 139 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 RS1O15537 224 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 GYPEP15421 78 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 LINC01559Q495D7 138 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 ZNF506Q5JVG8 444 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 DNLZQ5SXM8 178 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 C1orf134Q5TEV5 83 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 CFAP126Q5VTH2 177 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 NHLRC2Q8NBF2 726 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 C11orf52Q96A22 123 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
ATG4B-213ENST00000460211 ABCA13Q86UQ4 5058 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 A0A1B0GVG6 124 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 PRSS29PA6NIE9 313 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 H3BVH4 76 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 K7EQD1 137 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 GATA1P15976 413 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-213ENST00000460211 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
ATG4B-213ENST00000460211 MEF2BQ02080 365 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-213ENST00000460211 TTC32Q5I0X7 151 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 MLST8Q9BVC4 326 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 VAX2Q9UIW0 290 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 PHLDA3Q9Y5J5 127 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 DYNC1H1Q14204 4646 aaKnown RBP10.32□□□□□ -0.76
ATG4B-213ENST00000460211 PKD1P98161 4303 aa10.32□□□□□ -0.76
ATG4B-213ENST00000460211 TMSB15BA0A087X1C1 80 aa10.31□□□□□ -0.76
ATG4B-213ENST00000460211 GRIFINA4D1Z8 144 aa10.31□□□□□ -0.76
ATG4B-213ENST00000460211 ARMS2P0C7Q2 107 aa10.31□□□□□ -0.76
ATG4B-213ENST00000460211 BCL2P10415 239 aa10.31□□□□□ -0.76
ATG4B-213ENST00000460211 MGST1P10620 155 aaKnown RBP10.31□□□□□ -0.76
ATG4B-213ENST00000460211 ALKAL2Q6UX46 152 aa10.31□□□□□ -0.76
ATG4B-213ENST00000460211 MED9Q9NWA0 146 aa10.31□□□□□ -0.76
ATG4B-213ENST00000460211 TRBV6-4A0A1B0GX49 114 aa10.3□□□□□ -0.76
ATG4B-213ENST00000460211 RHOHQ15669 191 aa10.3□□□□□ -0.76
ATG4B-213ENST00000460211 PRR27Q6MZM9 219 aa10.3□□□□□ -0.76
ATG4B-213ENST00000460211 LYPD5Q6UWN5 251 aa10.3□□□□□ -0.76
ATG4B-213ENST00000460211 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
ATG4B-213ENST00000460211 IGHV3-73A0A0B4J1V6 119 aa10.29□□□□□ -0.76
ATG4B-213ENST00000460211 A0A1W2PPQ1 181 aa10.29□□□□□ -0.76
ATG4B-213ENST00000460211 RTL8CO15255 209 aa10.29□□□□□ -0.76
ATG4B-213ENST00000460211 GNG4P50150 75 aa10.29□□□□□ -0.76
ATG4B-213ENST00000460211 NKX2-5P52952 324 aaPredicted RBP10.29□□□□□ -0.76
ATG4B-213ENST00000460211 ZFP82Q8N141 532 aa10.29□□□□□ -0.76
ATG4B-213ENST00000460211 DAZAP1Q96EP5 407 aaKnown RBP10.29□□□□□ -0.76
ATG4B-213ENST00000460211 SMIM12Q96EX1 92 aa10.29□□□□□ -0.76
ATG4B-213ENST00000460211 KRTAP4-5Q9BYR2 181 aa10.29□□□□□ -0.76
ATG4B-213ENST00000460211 DNAH11Q96DT5 4516 aa10.29□□□□□ -0.76
ATG4B-213ENST00000460211 RHODO00212 210 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 SIVA1O15304 175 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 NXPH4O95158 308 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 CXCL1P09341 107 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 C6orf223Q8N319 242 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 SLC25A29Q8N8R3 303 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 DERL1Q9BUN8 251 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 PARLQ9H300 379 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 BIN3Q9NQY0 253 aa10.28□□□□□ -0.76
ATG4B-213ENST00000460211 M0R381 172 aa10.27□□□□□ -0.77
ATG4B-213ENST00000460211 SCRT2Q9NQ03 307 aa10.27□□□□□ -0.77
ATG4B-213ENST00000460211 TRAV9-2A0A087WT02 112 aa10.26□□□□□ -0.77
ATG4B-213ENST00000460211 LOC100131303A0A0U1RQF7 123 aa10.26□□□□□ -0.77
ATG4B-213ENST00000460211 BTF3P20290 206 aaKnown RBP10.26□□□□□ -0.77
ATG4B-213ENST00000460211 RAB19A4D1S5 217 aa10.25□□□□□ -0.77
ATG4B-213ENST00000460211 TIRAPP58753 221 aa10.25□□□□□ -0.77
ATG4B-213ENST00000460211 RPS20P60866 119 aaKnown RBP10.25□□□□□ -0.77
ATG4B-213ENST00000460211 RPL19P84098 196 aaKnown RBP10.25□□□□□ -0.77
ATG4B-213ENST00000460211 SFRP2Q96HF1 295 aa10.25□□□□□ -0.77
ATG4B-213ENST00000460211 BOLA1Q9Y3E2 137 aa10.25□□□□□ -0.77
ATG4B-213ENST00000460211 XKRY2A2RUG3 117 aa10.24□□□□□ -0.77
ATG4B-213ENST00000460211 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
ATG4B-213ENST00000460211 FAM74A4Q5TZK3 123 aa10.24□□□□□ -0.77
ATG4B-213ENST00000460211 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms