RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TRAV12-2A0A075B6T6 113 aa13.66□□□□□ -0.22
HPS3-202ENST00000460120 HIST2H2BDQ6DRA6 164 aa13.66□□□□□ -0.22
HPS3-202ENST00000460120 RASL10AQ92737 203 aa13.66□□□□□ -0.22
HPS3-202ENST00000460120 GCSHP23434 173 aa13.65□□□□□ -0.22
HPS3-202ENST00000460120 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.22
HPS3-202ENST00000460120 DPM2O94777 84 aa13.65□□□□□ -0.22
HPS3-202ENST00000460120 PSMG4Q5JS54 123 aa13.65□□□□□ -0.22
HPS3-202ENST00000460120 SMIM2Q9BVW6 85 aa13.65□□□□□ -0.22
HPS3-202ENST00000460120 CREBBPQ92793 2442 aa13.65□□□□□ -0.22
HPS3-202ENST00000460120 SORL1Q92673 2214 aa13.64□□□□□ -0.23
HPS3-202ENST00000460120 A0A087WWL8 130 aa13.64□□□□□ -0.23
HPS3-202ENST00000460120 H3BUT2 72 aa13.64□□□□□ -0.23
HPS3-202ENST00000460120 LINC01546A6NGU7 62 aa13.64□□□□□ -0.23
HPS3-202ENST00000460120 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
HPS3-202ENST00000460120 Q5PR19 223 aa13.64□□□□□ -0.23
HPS3-202ENST00000460120 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
HPS3-202ENST00000460120 ATP6V0BQ99437 205 aa13.64□□□□□ -0.23
HPS3-202ENST00000460120 MXRA5Q9NR99 2828 aa13.64□□□□□ -0.23
HPS3-202ENST00000460120 H3BUA1 57 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 SUMO2P61956 95 aaKnown RBP13.63□□□□□ -0.23
HPS3-202ENST00000460120 AP1S3Q96PC3 154 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 DPH3P1Q9H4G8 78 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 LENEPQ9Y5L5 61 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 IGHV4-4A0A075B6R2 117 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 OCIAD2Q56VL3 154 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 HSD52Q0P140 79 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 OR9G4Q8NGQ1 327 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 JMJD8Q96S16 334 aa13.63□□□□□ -0.23
HPS3-202ENST00000460120 PTPN13Q12923 2485 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 RNF223E7ERA6 249 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 ATP5LO75964 103 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 CD7P09564 240 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 SYNJ2BPP57105 145 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 CST9LQ9H4G1 147 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 F5H697 171 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 CFHR3Q02985 330 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 FAM74A4Q5TZK3 123 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 FAM159AQ6UWV7 190 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 MRAP2Q96G30 205 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 SCGB3A1Q96QR1 104 aa13.62□□□□□ -0.23
HPS3-202ENST00000460120 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.61□□□□□ -0.23
HPS3-202ENST00000460120 K7ERJ3 54 aa13.61□□□□□ -0.23
HPS3-202ENST00000460120 SEC11AP67812 179 aa13.61□□□□□ -0.23
HPS3-202ENST00000460120 A6NDN8 102 aa13.61□□□□□ -0.23
HPS3-202ENST00000460120 RIPPLY3P57055 190 aa13.61□□□□□ -0.23
HPS3-202ENST00000460120 ZMAT4Q9H898 229 aa13.61□□□□□ -0.23
HPS3-202ENST00000460120 PSMB8P28062 276 aa13.6□□□□□ -0.23
HPS3-202ENST00000460120 MAPKAPK5-AS1Q8N8E1 139 aa13.6□□□□□ -0.23
HPS3-202ENST00000460120 BEX4Q9NWD9 120 aaPredicted RBP13.6□□□□□ -0.23
HPS3-202ENST00000460120 FXYD2P54710 66 aa13.6□□□□□ -0.23
HPS3-202ENST00000460120 DCANP1Q8TF63 244 aa13.6□□□□□ -0.23
HPS3-202ENST00000460120 FAM19A4Q96LR4 140 aa13.6□□□□□ -0.23
HPS3-202ENST00000460120 EMP1P54849 157 aa13.59□□□□□ -0.23
HPS3-202ENST00000460120 LINC01356Q8N9X3 169 aa13.59□□□□□ -0.23
HPS3-202ENST00000460120 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
HPS3-202ENST00000460120 HTN1P15515 57 aa13.59□□□□□ -0.23
HPS3-202ENST00000460120 ID1P41134 155 aa13.59□□□□□ -0.23
HPS3-202ENST00000460120 AGRNO00468 2067 aa13.59□□□□□ -0.23
HPS3-202ENST00000460120 TRBV25-1A0A075B6N4 114 aa13.58□□□□□ -0.24
HPS3-202ENST00000460120 USP24Q9UPU5 2620 aa13.58□□□□□ -0.24
HPS3-202ENST00000460120 A0A087WX48 190 aa13.58□□□□□ -0.24
HPS3-202ENST00000460120 GAGE10A6NGK3 116 aa13.58□□□□□ -0.24
HPS3-202ENST00000460120 SPINK13Q1W4C9 94 aa13.58□□□□□ -0.24
HPS3-202ENST00000460120 DEFB136Q30KP8 78 aa13.58□□□□□ -0.24
HPS3-202ENST00000460120 MUC4Q99102 2169 aa13.58□□□□□ -0.24
HPS3-202ENST00000460120 C2orf66Q6UXQ4 117 aa13.57□□□□□ -0.24
HPS3-202ENST00000460120 NAV2Q8IVL1 2488 aa13.57□□□□□ -0.24
HPS3-202ENST00000460120 TLN2Q9Y4G6 2542 aa13.57□□□□□ -0.24
HPS3-202ENST00000460120 KRTAP10-9P60411 292 aa13.57□□□□□ -0.24
HPS3-202ENST00000460120 MDFICQ9P1T7 246 aa13.56□□□□□ -0.24
HPS3-202ENST00000460120 IGHV4OR15-8A0A075B7B6 117 aa13.56□□□□□ -0.24
HPS3-202ENST00000460120 A0A087WW49 117 aa13.56□□□□□ -0.24
HPS3-202ENST00000460120 C18orf65Q6ZTR6 163 aa13.56□□□□□ -0.24
HPS3-202ENST00000460120 DUX3Q96PT4 197 aa13.56□□□□□ -0.24
HPS3-202ENST00000460120 ORMDL2Q53FV1 153 aa13.55□□□□□ -0.24
HPS3-202ENST00000460120 TEX15Q9BXT5 2789 aa13.55□□□□□ -0.24
HPS3-202ENST00000460120 GAGE12BA1L429 117 aa13.55□□□□□ -0.24
HPS3-202ENST00000460120 C9orf118A6NHY6 69 aa13.55□□□□□ -0.24
HPS3-202ENST00000460120 H3BRM9 83 aa13.55□□□□□ -0.24
HPS3-202ENST00000460120 BBC3Q96PG8 261 aaPredicted RBP13.55□□□□□ -0.24
HPS3-202ENST00000460120 NHP2Q9NX24 153 aaKnown RBP13.55□□□□□ -0.24
HPS3-202ENST00000460120 KLLNB2CW77 178 aa13.55□□□□□ -0.24
HPS3-202ENST00000460120 SIVA1O15304 175 aa13.55□□□□□ -0.24
HPS3-202ENST00000460120 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
HPS3-202ENST00000460120 HOXA3O43365 443 aaPredicted RBP13.54□□□□□ -0.24
HPS3-202ENST00000460120 BRI3O95415 125 aa13.54□□□□□ -0.24
HPS3-202ENST00000460120 COX6B1P14854 86 aa13.54□□□□□ -0.24
HPS3-202ENST00000460120 SUMO4Q6EEV6 95 aa13.54□□□□□ -0.24
HPS3-202ENST00000460120 TOMM6Q96B49 74 aa13.54□□□□□ -0.24
HPS3-202ENST00000460120 H7C1H1 209 aa13.53□□□□□ -0.24
HPS3-202ENST00000460120 RPL39P62891 51 aaKnown RBP13.53□□□□□ -0.24
HPS3-202ENST00000460120 ZNF256Q9Y2P7 627 aaPredicted RBP13.53□□□□□ -0.24
HPS3-202ENST00000460120 SLC25A16P16260 332 aa13.53□□□□□ -0.24
HPS3-202ENST00000460120 KHDC1LQ5JSQ8 128 aa13.53□□□□□ -0.24
HPS3-202ENST00000460120 MYO9AB2RTY4 2548 aa13.53□□□□□ -0.24
HPS3-202ENST00000460120 F8VRH5 84 aa13.52□□□□□ -0.24
HPS3-202ENST00000460120 K7EMT4 169 aa13.52□□□□□ -0.24
HPS3-202ENST00000460120 PRM2P04554 102 aa13.52□□□□□ -0.24
HPS3-202ENST00000460120 SNRPD3P62318 126 aaKnown RBP13.52□□□□□ -0.24
HPS3-202ENST00000460120 BAALCQ8WXS3 180 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms