RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 C12orf74Q32Q52 190 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 FAM74A1Q5RGS3 127 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 TMEM78Q5T7P6 136 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 GFI1BQ5VTD9 330 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 Q6ZRP5 223 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 Q8N1X5 172 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 EXOC3-AS1Q8N2X6 119 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 ZFAND2AQ8N6M9 145 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 TMEM263Q8WUH6 116 aaKnown RBP3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 FAM210BQ96KR6 192 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 PYGO2Q9BRQ0 406 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 TMEM208Q9BTX3 173 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 AGPAT4-IT1Q9H0P7 198 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 ZNF492Q9P255 531 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 NAGKQ9UJ70 344 aa3.29□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 TRAV12-2A0A075B6T6 113 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 IGKV2-40A0A087WW87 121 aaPredicted RBP3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 KANTRA0A1W2PQU2 76 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 A0A1W2PRE2 83 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 PLAC8L1A1L4L8 177 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 C7orf71A4D174 169 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 SMLR1H3BR10 107 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 DEFB4AO15263 64 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 GATCO43716 136 aaKnown RBP3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 ZNF324O75467 553 aaPredicted RBP3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 IGKV2D-40P01614 121 aaPredicted RBP3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 C1QBP02746 253 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 ZNF138P52744 262 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 ZNF726P1Q15940 193 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 AKR1C8PQ5T2L2 129 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 FAM222AQ5U5X8 452 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 DPPA3Q6W0C5 159 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 Q6ZTC4 211 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 SLC7A5P1Q8MH63 180 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 LINC00612Q8N6U2 182 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 C5orf17Q8NAS9 161 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 ZNF680Q8NEM1 530 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 STOML3Q8TAV4 291 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 BAALCQ8WXS3 180 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 C16orf74Q96GX8 76 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 LINC01587Q99440 93 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 VGLL1Q99990 258 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 CELA1Q9UNI1 258 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 YTHDF2Q9Y5A9 579 aaKnown RBP3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 ARL2-SNX15V9GYD0 113 aa3.28□□□□□ -1.88
RNU6ATAC28P-201ENST00000459249 MAP1LC3B2A6NCE7 125 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 PGPA6NDG6 321 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 ZNF705GA8MUZ8 300 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 HMGB3O15347 200 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 GPX1P07203 203 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TPT1P13693 172 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 UBE2G2P60604 165 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 DAZ2Q13117 558 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 ERCC8Q13216 396 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 LGALSLQ3ZCW2 172 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 IBA57Q5T440 356 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 Q6AWC8 147 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TMUB2Q71RG4 321 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 SSX7Q7RTT5 188 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 CMTM2Q8TAZ6 248 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 NTN5Q8WTR8 489 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 MBD3L1Q8WWY6 194 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 HYLS1Q96M11 299 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TCEAL7Q9BRU2 100 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 ZNF471Q9BX82 626 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 MAP1LC3BQ9GZQ8 125 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TP53TG3Q9ULZ0 132 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TIMM8BQ9Y5J9 83 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 DNAH7Q8WXX0 4024 aa3.27□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 DEFB131BA0A096LNP1 70 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TRAV1-1A0A0B4J248 108 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TRAV12-3A0A0B4J271 114 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 A6NDN8 102 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 GGTLC3B5MD39 225 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 PPP1R2P9O14990 202 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 PFDN1O60925 122 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 EIF3GO75821 320 aaKnown RBP eCLIP3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TCRAP04437 139 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 PRB4P10163 310 aaPredicted RBP3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 AZU1P20160 251 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 RAB5CP51148 216 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 EMP1P54849 157 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TCL1AP56279 114 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 DAD1P61803 113 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 CD300CQ08708 224 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 BTN1A1Q13410 526 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TDRG1Q3Y452 100 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 SAPCD1Q5SSQ6 148 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 PRR9Q5T870 116 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 LGALS9CQ6DKI2 356 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 EIF5AL1Q6IS14 154 aaKnown RBP3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 GOLT1AQ6ZVE7 132 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 AKAP14Q86UN6 197 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 EIF4E3Q8N5X7 224 aaKnown RBP3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 CYB561D1Q8N8Q1 229 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 TMEM75Q8N9X5 138 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 C11orf72Q8NBR9 251 aa3.26□□□□□ -1.89
RNU6ATAC28P-201ENST00000459249 Q8TAT8 98 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms