RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CMTM2Q8TAZ6 248 aa2.72□□□□□ -1.97
HMGB3P21-201ENST00000452483 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.72□□□□□ -1.97
HMGB3P21-201ENST00000452483 SLX4Q8IY92 1834 aa2.72□□□□□ -1.97
HMGB3P21-201ENST00000452483 ARHGEF12Q9NZN5 1544 aa2.72□□□□□ -1.97
HMGB3P21-201ENST00000452483 PPLO60437 1756 aa2.72□□□□□ -1.97
HMGB3P21-201ENST00000452483 RGPD4Q7Z3J3 1758 aa2.72□□□□□ -1.97
HMGB3P21-201ENST00000452483 SUPT6HQ7KZ85 1726 aaKnown RBP2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 LAMC3Q9Y6N6 1575 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 IGKV3D-11A0A0A0MRZ8 115 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 TRAV13-2A0A0B4J235 113 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 CXCL8P10145 99 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 ZNF791Q3KP31 576 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 SERP2Q8N6R1 65 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 TRGV9Q99603 122 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 LINC00474Q9P2X8 69 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 CACFD1Q9UGQ2 172 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 KLK12Q9UKR0 248 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 TOPAZ1Q8N9V7 1692 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 MEGF6O75095 1541 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 ANK1P16157 1881 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 NLRP1Q9C000 1473 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 SHANK3Q9BYB0 1731 aa2.71□□□□□ -1.98
HMGB3P21-201ENST00000452483 KIAA1549Q9HCM3 1950 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 THOC2Q8NI27 1593 aaKnown RBP2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 ZC3H13Q5T200 1668 aaKnown RBP2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 CASZ1Q86V15 1759 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 EPRSP07814 1512 aaKnown RBP2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 PRDM15P57071 1507 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 IGLV2-18A0A075B6J9 118 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 TMSB15BA0A087X1C1 80 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 TRBV10-3A0A0K0K1G6 114 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 A0A1W2PPM0 123 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 NDUFC1O43677 76 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 NDPQ00604 133 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 MAPK1IP1LQ8NDC0 245 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 Q8TAT8 98 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 ZNF431Q8TF32 576 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 GFRA4Q9GZZ7 299 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 NDUFB11Q9NX14 153 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 CPAMD8Q8IZJ3 1885 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 FANCAO15360 1455 aa2.7□□□□□ -1.98
HMGB3P21-201ENST00000452483 ZNF318Q5VUA4 2279 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 ODF3BA8MYP8 253 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 CCL16O15467 120 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 CFDP00746 253 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 IGKV3-11P04433 115 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 IGLC2P0DOY2 106 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 IGLC3P0DOY3 106 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 MPV17LQ2QL34 196 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 ETDBQ3ZM63 59 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 NXT2Q9NPJ8 142 aaKnown RBP2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 SMAD5-AS1Q9Y6J3 95 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 PLA2R1Q13018 1463 aa2.69□□□□□ -1.98
HMGB3P21-201ENST00000452483 EEA1Q15075 1411 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 TUBGCP6Q96RT7 1819 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 TCHHQ07283 1943 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 CCDC88CQ9P219 2028 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 SNRNP200O75643 2136 aaKnown RBP2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 TRAV12-1A0A0B4J245 112 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 HCG22E2RYF7 251 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 HMGN3Q15651 99 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 CYP4F30PQ9H0H9 118 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 R4GN34 69 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 CDK12Q9NYV4 1490 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 RGPD3A6NKT7 1758 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 PLXNA2O75051 1894 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 COL27A1Q8IZC6 1860 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 TRPM7Q96QT4 1865 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 MUC4Q99102 2169 aa2.68□□□□□ -1.98
HMGB3P21-201ENST00000452483 DIP2BQ9P265 1576 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 PXDNQ92626 1479 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 KANTRA0A1W2PQU2 76 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 SYS1-DBNDD2H3BUS1 97 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 TFF1P04155 84 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 NMSQ5H8A3 153 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 BVES-AS1Q5T3Y7 98 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 AMELYQ99218 206 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 MANBALQ9NQG1 85 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 LHFPL6Q9Y693 200 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 COL24A1Q17RW2 1714 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 CDC42BPBQ9Y5S2 1711 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 LRP5O75197 1615 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 ANKARQ7Z5J8 1434 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 PLXNA4Q9HCM2 1894 aa2.67□□□□□ -1.98
HMGB3P21-201ENST00000452483 DIDO1Q9BTC0 2240 aaKnown RBP2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 PTPRFP10586 1907 aa2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 TNS1Q9HBL0 1735 aaKnown RBP2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 TRAV40A0A0B4J280 105 aa2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 P0C880 135 aa2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 WFDC2Q14508 124 aa2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 CYP2G1PQ6ZSU1 146 aa2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 KIF25-AS1Q9Y6Z4 181 aa2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 KIF14Q15058 1648 aa2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 EDC4Q6P2E9 1401 aaKnown RBP2.66□□□□□ -1.98
HMGB3P21-201ENST00000452483 EML5Q05BV3 1969 aa2.65□□□□□ -1.98
HMGB3P21-201ENST00000452483 MAGI3Q5TCQ9 1506 aa2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 TMEM30CPA0ZSE6 113 aa2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 MDKP21741 143 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P21-201ENST00000452483 SPATA45Q537H7 98 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms