RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 HRNRQ86YZ3 2850 aaPredicted RBP12.71□□□□□ -0.37
SNHG17-207ENST00000449469 J3QR89 54 aa12.71□□□□□ -0.38
SNHG17-207ENST00000449469 PF4V1P10720 104 aa12.71□□□□□ -0.38
SNHG17-207ENST00000449469 DCHS2Q6V1P9 2916 aa12.71□□□□□ -0.38
SNHG17-207ENST00000449469 IGHV3OR16-10A0A075B7F0 116 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 PRSS29PA6NIE9 313 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 HERVK_113P61574 105 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 FAM159AQ6UWV7 190 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 C10orf105Q8TEF2 133 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 TMEM141Q96I45 108 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 KLK15Q9H2R5 256 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 KIF25-AS1Q9Y6Z4 181 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 H3BUX3 64 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 LRBAP50851 2863 aa12.7□□□□□ -0.38
SNHG17-207ENST00000449469 CEP295Q9C0D2 2601 aa12.69□□□□□ -0.38
SNHG17-207ENST00000449469 IGHV4-61A0A0C4DH41 118 aa12.69□□□□□ -0.38
SNHG17-207ENST00000449469 SCGB2A2Q13296 93 aa12.69□□□□□ -0.38
SNHG17-207ENST00000449469 PRADC1Q9BSG0 188 aa12.69□□□□□ -0.38
SNHG17-207ENST00000449469 GNRH2O43555 120 aa12.68□□□□□ -0.38
SNHG17-207ENST00000449469 LGALS1P09382 135 aaKnown RBP12.68□□□□□ -0.38
SNHG17-207ENST00000449469 CFHR3Q02985 330 aa12.68□□□□□ -0.38
SNHG17-207ENST00000449469 TIMM17AQ99595 171 aa12.68□□□□□ -0.38
SNHG17-207ENST00000449469 VCYO14598 125 aa12.68□□□□□ -0.38
SNHG17-207ENST00000449469 IGHV3-11P01762 117 aa12.68□□□□□ -0.38
SNHG17-207ENST00000449469 LINC00315P59091 139 aa12.68□□□□□ -0.38
SNHG17-207ENST00000449469 CLEC2AQ6UVW9 174 aa12.68□□□□□ -0.38
SNHG17-207ENST00000449469 KIR2DL4Q99706 377 aa12.68□□□□□ -0.38
SNHG17-207ENST00000449469 C19orf84I3L1E1 186 aa12.67□□□□□ -0.38
SNHG17-207ENST00000449469 IGHV4-38-2P0DP08 117 aa12.67□□□□□ -0.38
SNHG17-207ENST00000449469 POLR2KP53803 58 aaKnown RBP12.67□□□□□ -0.38
SNHG17-207ENST00000449469 LY6EQ16553 131 aa12.67□□□□□ -0.38
SNHG17-207ENST00000449469 TRBV6-5A0A0K0K1A5 114 aa12.67□□□□□ -0.38
SNHG17-207ENST00000449469 RPL24P83731 157 aaKnown RBP12.67□□□□□ -0.38
SNHG17-207ENST00000449469 CCL19Q99731 98 aa12.67□□□□□ -0.38
SNHG17-207ENST00000449469 TMEM89A2RUT3 159 aa12.66□□□□□ -0.38
SNHG17-207ENST00000449469 ZNF815PA8K554 130 aa12.66□□□□□ -0.38
SNHG17-207ENST00000449469 F6UB75 175 aa12.66□□□□□ -0.38
SNHG17-207ENST00000449469 COX6B1P14854 86 aa12.66□□□□□ -0.38
SNHG17-207ENST00000449469 RIPPLY3P57055 190 aa12.66□□□□□ -0.38
SNHG17-207ENST00000449469 PMVKQ15126 192 aa12.66□□□□□ -0.38
SNHG17-207ENST00000449469 TEX48A0A1B0GUV7 120 aa12.65□□□□□ -0.38
SNHG17-207ENST00000449469 IGIPA6NJ69 53 aa12.65□□□□□ -0.38
SNHG17-207ENST00000449469 LGALS9O00182 355 aa12.65□□□□□ -0.38
SNHG17-207ENST00000449469 HOXA3O43365 443 aaPredicted RBP12.65□□□□□ -0.38
SNHG17-207ENST00000449469 DCANP1Q8TF63 244 aa12.65□□□□□ -0.38
SNHG17-207ENST00000449469 MSMBP08118 114 aa12.65□□□□□ -0.38
SNHG17-207ENST00000449469 LYRM7Q5U5X0 104 aa12.65□□□□□ -0.38
SNHG17-207ENST00000449469 ZFP2Q6ZN57 461 aa12.65□□□□□ -0.38
SNHG17-207ENST00000449469 PRORYQ9H606 182 aa12.65□□□□□ -0.38
SNHG17-207ENST00000449469 GATA3P23771 443 aa12.64□□□□□ -0.39
SNHG17-207ENST00000449469 LY6DQ14210 128 aa12.64□□□□□ -0.39
SNHG17-207ENST00000449469 SCGB1D4Q6XE38 83 aa12.64□□□□□ -0.39
SNHG17-207ENST00000449469 SYT8Q8NBV8 401 aa12.64□□□□□ -0.39
SNHG17-207ENST00000449469 SPANXB1Q9NS25 103 aaPredicted RBP12.64□□□□□ -0.39
SNHG17-207ENST00000449469 TP53TG1Q9Y2A0 90 aa12.64□□□□□ -0.39
SNHG17-207ENST00000449469 TRBV27A0A0K0K1C4 114 aa12.64□□□□□ -0.39
SNHG17-207ENST00000449469 DUSP14O95147 198 aaKnown RBP12.64□□□□□ -0.39
SNHG17-207ENST00000449469 DEFB1P60022 68 aa12.64□□□□□ -0.39
SNHG17-207ENST00000449469 SUMO4Q6EEV6 95 aa12.64□□□□□ -0.39
SNHG17-207ENST00000449469 CRYGDP07320 174 aa12.63□□□□□ -0.39
SNHG17-207ENST00000449469 BLCAPP62952 87 aa12.63□□□□□ -0.39
SNHG17-207ENST00000449469 GAGE13Q4V321 117 aa12.63□□□□□ -0.39
SNHG17-207ENST00000449469 C9orf85Q96MD7 179 aa12.63□□□□□ -0.39
SNHG17-207ENST00000449469 SELENOKQ9Y6D0 94 aa12.63□□□□□ -0.39
SNHG17-207ENST00000449469 IGLV4-69A0A075B6H9 119 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 C11orf86A6NJI1 115 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 UBE2D1P51668 147 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 RHOHQ15669 191 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 MED13LQ71F56 2210 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 SPRY2O43597 315 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 CD7P09564 240 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 SCGB1A1P11684 91 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 GNLYP22749 145 aa12.62□□□□□ -0.39
SNHG17-207ENST00000449469 SNRPD3P62318 126 aaKnown RBP12.62□□□□□ -0.39
SNHG17-207ENST00000449469 HIVEP3Q5T1R4 2406 aa12.61□□□□□ -0.39
SNHG17-207ENST00000449469 PSMB8P28062 276 aa12.61□□□□□ -0.39
SNHG17-207ENST00000449469 IGKV3-7A0A075B6H7 116 aa12.61□□□□□ -0.39
SNHG17-207ENST00000449469 SDHAF1A6NFY7 115 aa12.61□□□□□ -0.39
SNHG17-207ENST00000449469 H3BMG7 143 aa12.61□□□□□ -0.39
SNHG17-207ENST00000449469 TSHBP01222 138 aa12.61□□□□□ -0.39
SNHG17-207ENST00000449469 SRSF9Q13242 221 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNHG17-207ENST00000449469 MORN3Q6PF18 240 aaPredicted RBP12.61□□□□□ -0.39
SNHG17-207ENST00000449469 B4DSR2 109 aa12.6□□□□□ -0.39
SNHG17-207ENST00000449469 NSUN5P1Q3KNT7 163 aa12.6□□□□□ -0.39
SNHG17-207ENST00000449469 CACNA1BQ00975 2339 aa12.6□□□□□ -0.39
SNHG17-207ENST00000449469 IGHV3-16A0A0C4DH30 117 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 ATP5J2P56134 94 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 DSCR9P59020 149 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 ZNF876PQ49A33 203 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
SNHG17-207ENST00000449469 PGPEP1Q9NXJ5 209 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 PRO0461Q9UI25 63 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 NBASA2RRP1 2371 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 SPTBN1Q01082 2364 aaKnown RBP12.59□□□□□ -0.39
SNHG17-207ENST00000449469 F5H697 171 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 WFDC2Q14508 124 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 LCNL1Q6ZST4 164 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 RNF152Q8N8N0 203 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 ATP6V0E2Q8NHE4 81 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms