RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 X6R8D5 127 aa13.92□□□□□ -0.18
RPS28-202ENST00000449223 MUC4Q99102 2169 aa13.91□□□□□ -0.18
RPS28-202ENST00000449223 TGIF2-C20orf24A0A0A6YYL0 155 aa13.91□□□□□ -0.18
RPS28-202ENST00000449223 A0A1B0GW15 77 aa13.91□□□□□ -0.18
RPS28-202ENST00000449223 PRB2P02812 416 aaPredicted RBP13.91□□□□□ -0.18
RPS28-202ENST00000449223 ZNF415Q09FC8 603 aa13.91□□□□□ -0.18
RPS28-202ENST00000449223 C16orf74Q96GX8 76 aa13.91□□□□□ -0.18
RPS28-202ENST00000449223 RCHY1Q96PM5 261 aa13.91□□□□□ -0.18
RPS28-202ENST00000449223 PRM2P04554 102 aa13.9□□□□□ -0.18
RPS28-202ENST00000449223 HTN1P15515 57 aa13.9□□□□□ -0.18
RPS28-202ENST00000449223 AZU1P20160 251 aa13.9□□□□□ -0.18
RPS28-202ENST00000449223 CACNG7P62955 275 aa13.9□□□□□ -0.18
RPS28-202ENST00000449223 RRN3P1Q2M238 152 aa13.9□□□□□ -0.18
RPS28-202ENST00000449223 PIK3CD-AS1Q5SR53 167 aa13.9□□□□□ -0.18
RPS28-202ENST00000449223 PTH2Q96A98 100 aa13.9□□□□□ -0.18
RPS28-202ENST00000449223 TPPP3Q9BW30 176 aa13.9□□□□□ -0.18
RPS28-202ENST00000449223 SPRY2O43597 315 aa13.9□□□□□ -0.19
RPS28-202ENST00000449223 OR10AG1Q8NH19 301 aa13.9□□□□□ -0.19
RPS28-202ENST00000449223 BORCS7Q96B45 105 aa13.9□□□□□ -0.19
RPS28-202ENST00000449223 FAM210BQ96KR6 192 aa13.9□□□□□ -0.19
RPS28-202ENST00000449223 SPXQ9BT56 116 aa13.9□□□□□ -0.19
RPS28-202ENST00000449223 PHLDA3Q9Y5J5 127 aa13.9□□□□□ -0.19
RPS28-202ENST00000449223 PLAC8L1A1L4L8 177 aa13.89□□□□□ -0.19
RPS28-202ENST00000449223 RIGQ13278 110 aa13.89□□□□□ -0.19
RPS28-202ENST00000449223 GATD1Q8NB37 220 aa13.89□□□□□ -0.19
RPS28-202ENST00000449223 NTF3P20783 257 aa13.88□□□□□ -0.19
RPS28-202ENST00000449223 HBBP68871 147 aa13.88□□□□□ -0.19
RPS28-202ENST00000449223 COX19Q49B96 90 aa13.88□□□□□ -0.19
RPS28-202ENST00000449223 MRPL54Q6P161 138 aaKnown RBP13.88□□□□□ -0.19
RPS28-202ENST00000449223 NDUFAF3Q9BU61 184 aa13.88□□□□□ -0.19
RPS28-202ENST00000449223 GSN-AS1Q9NRJ2 163 aa13.88□□□□□ -0.19
RPS28-202ENST00000449223 SPINK4O60575 86 aa13.87□□□□□ -0.19
RPS28-202ENST00000449223 DAZ2Q13117 558 aaKnown RBP13.87□□□□□ -0.19
RPS28-202ENST00000449223 ZFP82Q8N141 532 aa13.87□□□□□ -0.19
RPS28-202ENST00000449223 MIFP14174 115 aa13.86□□□□□ -0.19
RPS28-202ENST00000449223 SPANXN1Q5VSR9 72 aa13.86□□□□□ -0.19
RPS28-202ENST00000449223 OR11H2Q8NH07 326 aa13.86□□□□□ -0.19
RPS28-202ENST00000449223 OVOL2Q9BRP0 275 aa13.86□□□□□ -0.19
RPS28-202ENST00000449223 M0R2P5 195 aa13.85□□□□□ -0.19
RPS28-202ENST00000449223 S100A8P05109 93 aa13.85□□□□□ -0.19
RPS28-202ENST00000449223 GNB1LQ9BYB4 327 aa13.85□□□□□ -0.19
RPS28-202ENST00000449223 RAB5AP20339 215 aa13.85□□□□□ -0.19
RPS28-202ENST00000449223 DMRTA1Q5VZB9 504 aa13.85□□□□□ -0.19
RPS28-202ENST00000449223 SBSPONQ8IVN8 264 aa13.85□□□□□ -0.19
RPS28-202ENST00000449223 TIMM8BQ9Y5J9 83 aaPredicted RBP13.85□□□□□ -0.19
RPS28-202ENST00000449223 MUC21A0A0G2JKD1 596 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 MUC21A0A140T8X8 626 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 SNURFLB1AK76 121 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 TWIST1Q15672 202 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 LGALS9BQ3B8N2 356 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 Q8NAQ8 132 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 SYT8Q8NBV8 401 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 RASL10AQ92737 203 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 TM2D3Q9BRN9 247 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 MSRB1Q9NZV6 116 aa13.84□□□□□ -0.19
RPS28-202ENST00000449223 M0R381 172 aa13.83□□□□□ -0.2
RPS28-202ENST00000449223 MT-ND6P03923 174 aa13.83□□□□□ -0.2
RPS28-202ENST00000449223 ZNF876PQ49A33 203 aa13.83□□□□□ -0.2
RPS28-202ENST00000449223 DEFB121Q5J5C9 76 aa13.83□□□□□ -0.2
RPS28-202ENST00000449223 TMEM136Q6ZRR5 245 aa13.83□□□□□ -0.2
RPS28-202ENST00000449223 TMEM191AQ9H0A3 160 aa13.83□□□□□ -0.2
RPS28-202ENST00000449223 HLA-DQA1P01909 254 aa13.82□□□□□ -0.2
RPS28-202ENST00000449223 TRGC1P0CF51 173 aa13.82□□□□□ -0.2
RPS28-202ENST00000449223 CAMPP49913 170 aa13.82□□□□□ -0.2
RPS28-202ENST00000449223 MRAPQ8TCY5 172 aa13.81□□□□□ -0.2
RPS28-202ENST00000449223 AP1S3Q96PC3 154 aa13.81□□□□□ -0.2
RPS28-202ENST00000449223 MEGF8Q7Z7M0 2845 aa13.81□□□□□ -0.2
RPS28-202ENST00000449223 IGHV4-28A0A0C4DH34 117 aa13.8□□□□□ -0.2
RPS28-202ENST00000449223 SPATA25Q9BR10 227 aa13.8□□□□□ -0.2
RPS28-202ENST00000449223 LINC00612Q8N6U2 182 aa13.8□□□□□ -0.2
RPS28-202ENST00000449223 NOP10Q9NPE3 64 aaKnown RBP13.8□□□□□ -0.2
RPS28-202ENST00000449223 SSTP61278 116 aa13.79□□□□□ -0.2
RPS28-202ENST00000449223 TENM3Q9P273 2699 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 LYRM9A8MSI8 78 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 A8MWV9 139 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 EVI2AP22794 236 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 RPS10P46783 165 aaKnown RBP13.78□□□□□ -0.2
RPS28-202ENST00000449223 SMIM15Q7Z3B0 74 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 C18orf15Q96N68 181 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 B9D2Q9BPU9 175 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 RETNQ9HD89 108 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 KIF25-AS1Q9Y6Z4 181 aa13.78□□□□□ -0.2
RPS28-202ENST00000449223 FAM104BQ5XKR9 115 aa13.77□□□□□ -0.21
RPS28-202ENST00000449223 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.77□□□□□ -0.21
RPS28-202ENST00000449223 C11orf68Q9H3H3 251 aaKnown RBP13.77□□□□□ -0.21
RPS28-202ENST00000449223 MRPL16Q9NX20 251 aaKnown RBP13.77□□□□□ -0.21
RPS28-202ENST00000449223 NACAE9PAV3 2078 aa13.76□□□□□ -0.21
RPS28-202ENST00000449223 PHOX2AO14813 284 aa13.76□□□□□ -0.21
RPS28-202ENST00000449223 RAB4BP61018 213 aa13.76□□□□□ -0.21
RPS28-202ENST00000449223 Q6ZTI0 123 aa13.76□□□□□ -0.21
RPS28-202ENST00000449223 POM121L12Q8N7R1 296 aa13.76□□□□□ -0.21
RPS28-202ENST00000449223 DPH3P1Q9H4G8 78 aa13.76□□□□□ -0.21
RPS28-202ENST00000449223 TRAPPC1Q9Y5R8 145 aa13.76□□□□□ -0.21
RPS28-202ENST00000449223 TRGV1A0A0A0MS02 117 aa13.75□□□□□ -0.21
RPS28-202ENST00000449223 CRYGDP07320 174 aa13.75□□□□□ -0.21
RPS28-202ENST00000449223 LINC00315P59091 139 aa13.75□□□□□ -0.21
RPS28-202ENST00000449223 SLAQ13239 276 aa13.75□□□□□ -0.21
RPS28-202ENST00000449223 UFSP1Q6NVU6 142 aa13.75□□□□□ -0.21
RPS28-202ENST00000449223 MRPL18Q9H0U6 180 aaKnown RBP13.75□□□□□ -0.21
RPS28-202ENST00000449223 JPT2Q9H910 190 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms