RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 RNF5Q99942 180 aa12.25□□□□□ -0.45
CNOT3-204ENST00000447684 IGHV3-30P01768 117 aa12.24□□□□□ -0.45
CNOT3-204ENST00000447684 IGHV3-30-5P0DP03 117 aa12.24□□□□□ -0.45
CNOT3-204ENST00000447684 C3orf56Q8N813 242 aa12.24□□□□□ -0.45
CNOT3-204ENST00000447684 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
CNOT3-204ENST00000447684 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.24□□□□□ -0.45
CNOT3-204ENST00000447684 MSRB2Q9Y3D2 182 aa12.24□□□□□ -0.45
CNOT3-204ENST00000447684 Q8N1Y9 231 aa12.23□□□□□ -0.45
CNOT3-204ENST00000447684 TEX49A0A1B0GTD5 131 aa12.23□□□□□ -0.45
CNOT3-204ENST00000447684 TIMD4Q96H15 378 aa12.23□□□□□ -0.45
CNOT3-204ENST00000447684 A4D1N5 150 aa12.22□□□□□ -0.45
CNOT3-204ENST00000447684 IGF1P05019 195 aa12.22□□□□□ -0.45
CNOT3-204ENST00000447684 ASIPP42127 132 aa12.22□□□□□ -0.45
CNOT3-204ENST00000447684 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
CNOT3-204ENST00000447684 TRAV2A0A0B4J234 112 aa12.22□□□□□ -0.45
CNOT3-204ENST00000447684 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
CNOT3-204ENST00000447684 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
CNOT3-204ENST00000447684 IGHV3-64A0A075B6Q5 118 aa12.21□□□□□ -0.45
CNOT3-204ENST00000447684 TRAV8-4A0A0B4J246 113 aa12.21□□□□□ -0.45
CNOT3-204ENST00000447684 TCF15Q12870 199 aa12.21□□□□□ -0.45
CNOT3-204ENST00000447684 FAM110AQ9BQ89 295 aa12.21□□□□□ -0.45
CNOT3-204ENST00000447684 TP53TG1Q9Y2A0 90 aa12.21□□□□□ -0.45
CNOT3-204ENST00000447684 APC2O95996 2303 aa12.21□□□□□ -0.45
CNOT3-204ENST00000447684 CRYGDP07320 174 aa12.21□□□□□ -0.46
CNOT3-204ENST00000447684 PRR9Q5T870 116 aa12.2□□□□□ -0.46
CNOT3-204ENST00000447684 DPM3Q9P2X0 92 aa12.2□□□□□ -0.46
CNOT3-204ENST00000447684 BUB3O43684 328 aa12.2□□□□□ -0.46
CNOT3-204ENST00000447684 CLEC3BP05452 202 aa12.2□□□□□ -0.46
CNOT3-204ENST00000447684 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
CNOT3-204ENST00000447684 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
CNOT3-204ENST00000447684 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
CNOT3-204ENST00000447684 LRBAP50851 2863 aa12.2□□□□□ -0.46
CNOT3-204ENST00000447684 ELANEP08246 267 aa12.19□□□□□ -0.46
CNOT3-204ENST00000447684 MEIG1Q5JSS6 88 aa12.19□□□□□ -0.46
CNOT3-204ENST00000447684 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
CNOT3-204ENST00000447684 EP300Q09472 2414 aaPredicted RBP12.19□□□□□ -0.46
CNOT3-204ENST00000447684 IGLV4-69A0A075B6H9 119 aa12.19□□□□□ -0.46
CNOT3-204ENST00000447684 RBAKDNA6NC62 111 aa12.19□□□□□ -0.46
CNOT3-204ENST00000447684 LY6LH3BQJ8 138 aa12.19□□□□□ -0.46
CNOT3-204ENST00000447684 C15orf32Q32M92 178 aa12.19□□□□□ -0.46
CNOT3-204ENST00000447684 ECSCRQ19T08 205 aa12.18□□□□□ -0.46
CNOT3-204ENST00000447684 PIEZO2Q9H5I5 2752 aa12.18□□□□□ -0.46
CNOT3-204ENST00000447684 J3QQQ9 107 aa12.18□□□□□ -0.46
CNOT3-204ENST00000447684 IGHV4-4A0A075B6R2 117 aa12.17□□□□□ -0.46
CNOT3-204ENST00000447684 TSHBP01222 138 aa12.17□□□□□ -0.46
CNOT3-204ENST00000447684 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
CNOT3-204ENST00000447684 DEFB1P60022 68 aa12.17□□□□□ -0.46
CNOT3-204ENST00000447684 PMVKQ15126 192 aa12.17□□□□□ -0.46
CNOT3-204ENST00000447684 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
CNOT3-204ENST00000447684 C16orf92Q96LL3 132 aa12.17□□□□□ -0.46
CNOT3-204ENST00000447684 LINC01620Q4KN68 170 aa12.16□□□□□ -0.46
CNOT3-204ENST00000447684 ODF3Q96PU9 254 aa12.16□□□□□ -0.46
CNOT3-204ENST00000447684 ATXN8Q156A1 80 aa12.16□□□□□ -0.46
CNOT3-204ENST00000447684 NPBQ8NG41 125 aa12.16□□□□□ -0.46
CNOT3-204ENST00000447684 SPTBN1Q01082 2364 aaKnown RBP12.15□□□□□ -0.46
CNOT3-204ENST00000447684 PAPPA-AS1Q5QFB9 102 aa12.15□□□□□ -0.46
CNOT3-204ENST00000447684 FAM57AQ8TBR7 257 aa12.15□□□□□ -0.46
CNOT3-204ENST00000447684 E7EQL1 145 aa12.15□□□□□ -0.46
CNOT3-204ENST00000447684 RNF223E7ERA6 249 aa12.15□□□□□ -0.46
CNOT3-204ENST00000447684 EIF4EBP3O60516 100 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-204ENST00000447684 MUSTN1Q8IVN3 82 aa12.15□□□□□ -0.46
CNOT3-204ENST00000447684 ZNRF2Q8NHG8 242 aa12.15□□□□□ -0.46
CNOT3-204ENST00000447684 PRO3102Q9H379 93 aa12.15□□□□□ -0.46
CNOT3-204ENST00000447684 F5H697 171 aa12.14□□□□□ -0.47
CNOT3-204ENST00000447684 H3BMM0 161 aa12.14□□□□□ -0.47
CNOT3-204ENST00000447684 ZNF56Q15929 161 aa12.14□□□□□ -0.47
CNOT3-204ENST00000447684 UBE2WQ96B02 151 aa12.14□□□□□ -0.47
CNOT3-204ENST00000447684 CHCHD5Q9BSY4 110 aa12.14□□□□□ -0.47
CNOT3-204ENST00000447684 ZFAND3Q9H8U3 227 aa12.14□□□□□ -0.47
CNOT3-204ENST00000447684 RELNP78509 3460 aa12.14□□□□□ -0.47
CNOT3-204ENST00000447684 GNRH2O43555 120 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 DCHS2Q6V1P9 2916 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 A0A0G2JNJ9 132 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 CENPVL3A0A0U1RRI6 287 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 LY6HO94772 140 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 OR10J6PQ8NGY7 276 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
CNOT3-204ENST00000447684 Q9UFV3 132 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 FOXC1Q12948 553 aa12.13□□□□□ -0.47
CNOT3-204ENST00000447684 CUL9Q8IWT3 2517 aa12.12□□□□□ -0.47
CNOT3-204ENST00000447684 RNASE4P34096 147 aaKnown RBP12.12□□□□□ -0.47
CNOT3-204ENST00000447684 C9orf47Q6ZRZ4 202 aa12.12□□□□□ -0.47
CNOT3-204ENST00000447684 METTL26Q96S19 204 aa12.12□□□□□ -0.47
CNOT3-204ENST00000447684 OPRPNQ99935 248 aaPredicted RBP12.12□□□□□ -0.47
CNOT3-204ENST00000447684 PRSS2P07478 247 aa12.12□□□□□ -0.47
CNOT3-204ENST00000447684 IGFL3Q6UXB1 125 aa12.12□□□□□ -0.47
CNOT3-204ENST00000447684 IGKV3-7A0A075B6H7 116 aa12.11□□□□□ -0.47
CNOT3-204ENST00000447684 CLPSL1A2RUU4 121 aa12.11□□□□□ -0.47
CNOT3-204ENST00000447684 ADARB2-AS1A8MUL3 147 aa12.11□□□□□ -0.47
CNOT3-204ENST00000447684 BRI3O95415 125 aa12.11□□□□□ -0.47
CNOT3-204ENST00000447684 IGIPA6NJ69 53 aa12.11□□□□□ -0.47
CNOT3-204ENST00000447684 GPHB5Q86YW7 130 aa12.11□□□□□ -0.47
CNOT3-204ENST00000447684 DUX3Q96PT4 197 aa12.11□□□□□ -0.47
CNOT3-204ENST00000447684 JPT2Q9H910 190 aa12.11□□□□□ -0.47
CNOT3-204ENST00000447684 ZNF256Q9Y2P7 627 aaPredicted RBP12.11□□□□□ -0.47
CNOT3-204ENST00000447684 ASH1LQ9NR48 2969 aaKnown RBP12.11□□□□□ -0.47
CNOT3-204ENST00000447684 A0A087WWL8 130 aa12.1□□□□□ -0.47
CNOT3-204ENST00000447684 PIP4P1Q86T03 277 aa12.1□□□□□ -0.47
CNOT3-204ENST00000447684 AMELXQ99217 191 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms