RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 CDIP1Q9H305 208 aa12.36□□□□□ -0.43
PIKFYVE-206ENST00000443896 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
PIKFYVE-206ENST00000443896 IGKV3D-20A0A0C4DH25 116 aa12.36□□□□□ -0.43
PIKFYVE-206ENST00000443896 PF4V1P10720 104 aa12.36□□□□□ -0.43
PIKFYVE-206ENST00000443896 CFHR3Q02985 330 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 NFE4Q86UQ8 179 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 GPHB5Q86YW7 130 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 TRBV25-1A0A075B6N4 114 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 TSPAN13O95857 204 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 IGHV3-11P01762 117 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 C11orf21Q9P2W6 132 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 CELSR2Q9HCU4 2923 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 PHLDA1Q8WV24 401 aaPredicted RBP12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 C20orf173Q96LM9 149 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 MSRB1Q9NZV6 116 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 CYSLTR1Q9Y271 337 aa12.35□□□□□ -0.43
PIKFYVE-206ENST00000443896 A0A096LNT2 108 aa12.34□□□□□ -0.43
PIKFYVE-206ENST00000443896 SIVA1O15304 175 aa12.34□□□□□ -0.43
PIKFYVE-206ENST00000443896 PRB1P04280 392 aa12.34□□□□□ -0.43
PIKFYVE-206ENST00000443896 LINC01356Q8N9X3 169 aa12.34□□□□□ -0.43
PIKFYVE-206ENST00000443896 RNF185Q96GF1 192 aa12.34□□□□□ -0.43
PIKFYVE-206ENST00000443896 KIR2DL4Q99706 377 aa12.34□□□□□ -0.43
PIKFYVE-206ENST00000443896 TMEM160Q9NX00 188 aa12.34□□□□□ -0.43
PIKFYVE-206ENST00000443896 ZNF580Q9UK33 172 aa12.34□□□□□ -0.43
PIKFYVE-206ENST00000443896 LOC107984156A0A0G2JMH3 177 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 SOCS3O14543 225 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 CKS2P33552 79 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 Q6ZUT4 128 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 ARL17AQ8IVW1 177 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 TRBV7-9A0A0J9YWB2 115 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 A6NJY4 79 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 H3BVH4 76 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 FOXI1Q12951 378 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 HIST1H4GQ99525 98 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 LENEPQ9Y5L5 61 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 SPG11Q96JI7 2443 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 C1QTNF4Q9BXJ3 329 aa12.33□□□□□ -0.44
PIKFYVE-206ENST00000443896 ACACBO00763 2458 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 E9PLD3 99 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 C12orf74Q32Q52 190 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 CEND1Q8N111 149 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 ERG28Q9UKR5 140 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 NPYP01303 97 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 LGALS9BQ3B8N2 356 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 LGALS9CQ6DKI2 356 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 MAPKAPK5-AS1Q8N8E1 139 aa12.32□□□□□ -0.44
PIKFYVE-206ENST00000443896 PSMB2P49721 201 aa12.31□□□□□ -0.44
PIKFYVE-206ENST00000443896 ZC2HC1BQ5TFG8 222 aa12.31□□□□□ -0.44
PIKFYVE-206ENST00000443896 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
PIKFYVE-206ENST00000443896 TM2D2Q9BX73 214 aa12.31□□□□□ -0.44
PIKFYVE-206ENST00000443896 GAS8-AS1O95177 125 aa12.31□□□□□ -0.44
PIKFYVE-206ENST00000443896 DEFB112Q30KQ8 113 aa12.31□□□□□ -0.44
PIKFYVE-206ENST00000443896 CRYBG3Q68DQ2 2970 aa12.31□□□□□ -0.44
PIKFYVE-206ENST00000443896 IGHV7-4-1A0A0J9YVY3 117 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 COX6B1P14854 86 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 EVI2AP22794 236 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 GAGE5Q13069 117 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 GAGE6Q13070 117 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 LINC00477Q96M19 166 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 J3QLI3 93 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 IGHV4-59P01825 116 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 HBDP02042 147 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 FOXC2Q99958 501 aa12.3□□□□□ -0.44
PIKFYVE-206ENST00000443896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■■■■ 37.2
PIKFYVE-206ENST00000443896 OVOL1O14753 267 aa12.29□□□□□ -0.44
PIKFYVE-206ENST00000443896 PRR9Q5T870 116 aa12.29□□□□□ -0.44
PIKFYVE-206ENST00000443896 Q6ZQT7 251 aa12.29□□□□□ -0.44
PIKFYVE-206ENST00000443896 CCDC179H3BU77 68 aa12.29□□□□□ -0.44
PIKFYVE-206ENST00000443896 DAZ1Q9NQZ3 744 aaKnown RBP12.29□□□□□ -0.44
PIKFYVE-206ENST00000443896 UTP20O75691 2785 aaKnown RBP12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 SRSF1Q07955 248 aaKnown RBP eCLIP12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 TMEM95Q3KNT9 176 aa12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 RHPN1-AS1Q9BWJ2 59 aa12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 PRO0461Q9UI25 63 aa12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 PSMB8P28062 276 aa12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 SMCPP49901 116 aaPredicted RBP12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 ZFP2Q6ZN57 461 aa12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 OR10J6PQ8NGY7 276 aa12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 CSMD2Q7Z408 3487 aa12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 ZFAND2AQ8N6M9 145 aa12.28□□□□□ -0.44
PIKFYVE-206ENST00000443896 LINC01546A6NGU7 62 aa12.27□□□□□ -0.45
PIKFYVE-206ENST00000443896 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
PIKFYVE-206ENST00000443896 IGHV4-4A0A075B6R2 117 aa12.27□□□□□ -0.45
PIKFYVE-206ENST00000443896 OR11H12B2RN74 326 aa12.27□□□□□ -0.45
PIKFYVE-206ENST00000443896 OR11H1Q8NG94 326 aa12.27□□□□□ -0.45
PIKFYVE-206ENST00000443896 OR11H2Q8NH07 326 aa12.27□□□□□ -0.45
PIKFYVE-206ENST00000443896 K7EMT4 169 aa12.26□□□□□ -0.45
PIKFYVE-206ENST00000443896 RPL11P62913 178 aaKnown RBP12.26□□□□□ -0.45
PIKFYVE-206ENST00000443896 USP24Q9UPU5 2620 aa12.26□□□□□ -0.45
PIKFYVE-206ENST00000443896 LEPP41159 167 aa12.26□□□□□ -0.45
PIKFYVE-206ENST00000443896 RPL32P62910 135 aaKnown RBP12.26□□□□□ -0.45
PIKFYVE-206ENST00000443896 ZNF843Q8N446 348 aa12.26□□□□□ -0.45
PIKFYVE-206ENST00000443896 FAM19A4Q96LR4 140 aa12.26□□□□□ -0.45
PIKFYVE-206ENST00000443896 FBN2P35556 2912 aa12.26□□□□□ -0.45
PIKFYVE-206ENST00000443896 MYO18BQ8IUG5 2567 aa12.25□□□□□ -0.45
PIKFYVE-206ENST00000443896 TNFRSF6BO95407 300 aa12.25□□□□□ -0.45
PIKFYVE-206ENST00000443896 GATA1P15976 413 aaPredicted RBP12.25□□□□□ -0.45
PIKFYVE-206ENST00000443896 ID1P41134 155 aa12.25□□□□□ -0.45
PIKFYVE-206ENST00000443896 MAPK1IP1LQ8NDC0 245 aa12.25□□□□□ -0.45
PIKFYVE-206ENST00000443896 MAP1AP78559 2803 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms