RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 TULP4Q9NRJ4 1543 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 LOC107986453A0A1B0GWG9 222 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 RBP4P02753 201 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 PCBD1P61457 104 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 HSD52Q0P140 79 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 ARPINQ7Z6K5 226 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 LINC00269Q8N2A0 174 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 Q8N2B8 174 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 PTPRBP23467 1997 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 CASP8AP2Q9UKL3 1982 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 PEAK1Q9H792 1746 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 CICQ96RK0 1608 aaPredicted RBP2.53□□□□□ -2
TM9SF3-202ENST00000443638 NEXMIFQ5QGS0 1516 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 PNMA8CA0A1B0GUJ8 204 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 TNFP01375 233 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 TRACP01848 142 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 CD3DP04234 171 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 CD14P08571 375 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 Q6ZUT4 128 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 GKN2Q86XP6 184 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 C10orf111Q8N326 155 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 SFT2D1Q8WV19 159 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 MUCL1Q96DR8 90 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 NAA60Q9H7X0 242 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 RPRMQ9NS64 109 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 ABCA3Q99758 1704 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 FMN2Q9NZ56 1722 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 GCC2Q8IWJ2 1684 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 NRXN3Q9Y4C0 1643 aa2.53□□□□□ -2
TM9SF3-202ENST00000443638 ARHGEF5Q12774 1597 aa2.53□□□□□ -2.01
TM9SF3-202ENST00000443638 ZFHX2Q9C0A1 2572 aaPredicted RBP2.53□□□□□ -2.01
TM9SF3-202ENST00000443638 KTN1Q86UP2 1357 aaKnown RBP2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 LTBP2Q14767 1821 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 COL14A1Q05707 1796 aaKnown RBP2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 COL24A1Q17RW2 1714 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 TCRBV4S1A1TA0A5B7 111 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 A6NN06 94 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 CD2P06729 351 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 CIRBPQ14011 172 aaKnown RBP2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 ASB16-AS1Q495Z4 193 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 COL5A1-AS1Q5SY13 56 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 OR5AS1Q8N127 324 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 FAM19A2Q8N3H0 131 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 TMEM254Q8TBM7 123 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 TAS2R8Q9NYW2 309 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 MYH9P35579 1960 aaKnown RBP2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 MYH6P13533 1939 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 MYO5AQ9Y4I1 1855 aaKnown RBP2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 CCDC141Q6ZP82 1450 aa2.52□□□□□ -2.01
TM9SF3-202ENST00000443638 RRBP1Q9P2E9 1410 aaKnown RBP2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 HEATR5BQ9P2D3 2071 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 TOPAZ1Q8N9V7 1692 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 PAPPAQ13219 1627 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 TRAV10A0A0B4J240 114 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 C5orf67F2Z3F1 127 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 KLF7O75840 302 aaPredicted RBP2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 CNBPP62633 177 aaKnown RBP2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 CATR1Q13166 79 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 TXNDC17Q9BRA2 123 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 SEC11CQ9BY50 192 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 AGPAT4-IT1Q9H0P7 198 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 PRO0461Q9UI25 63 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 RGPD3A6NKT7 1758 aaPredicted RBP2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 RGPD4Q7Z3J3 1758 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 ATP7BP35670 1465 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 FYCO1Q9BQS8 1478 aa2.51□□□□□ -2.01
TM9SF3-202ENST00000443638 COL6A3P12111 3177 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 ZNF736B4DX44 427 aaPredicted RBP2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 M0R2P5 195 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 GEMIN2O14893 280 aaKnown RBP2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 HYPMO75409 117 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 CKS2P33552 79 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 ETV6P41212 452 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 S100A10P60903 97 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 Q56UQ5 140 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 C1orf137Q5JT78 98 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 MRPL54Q6P161 138 aaKnown RBP2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 ZNF833PQ6ZTB9 187 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 OR5AK2Q8NH90 309 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 OTOSQ8NHW6 89 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 Q8TAT8 98 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 SNHG12Q9BXW3 62 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 FAIMQ9NVQ4 179 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 RGPD8O14715 1765 aaPredicted RBP2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 AKAP12Q02952 1782 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 CCDC18Q5T9S5 1454 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 HFM1A2PYH4 1435 aa2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 EIF2AK4Q9P2K8 1649 aaKnown RBP2.5□□□□□ -2.01
TM9SF3-202ENST00000443638 ADGRB1O14514 1584 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 CACNA1GO43497 2377 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 MYH13Q9UKX3 1938 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 ERC2-IT1O76042 136 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 CLECL1Q8IZS7 167 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 Q96M85 177 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 SERP1Q9Y6X1 66 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 ICE1Q9Y2F5 2266 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 C10orf71Q711Q0 1435 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 SZT2Q5T011 3432 aa2.49□□□□□ -2.01
TM9SF3-202ENST00000443638 RP1P56715 2156 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms