RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 ZNF415Q09FC8 603 aa11.66□□□□□ -0.54
UBE2F-214ENST00000440223 PHLDA3Q9Y5J5 127 aa11.66□□□□□ -0.54
UBE2F-214ENST00000440223 TIMM8BQ9Y5J9 83 aaPredicted RBP11.66□□□□□ -0.54
UBE2F-214ENST00000440223 UBE2CO00762 179 aa11.65□□□□□ -0.54
UBE2F-214ENST00000440223 SNAI2O43623 268 aa11.65□□□□□ -0.54
UBE2F-214ENST00000440223 MT-ND6P03923 174 aa11.65□□□□□ -0.54
UBE2F-214ENST00000440223 RBMY1A1P0DJD3 496 aaKnown RBP11.65□□□□□ -0.54
UBE2F-214ENST00000440223 RBMY1CP0DJD4 496 aa11.65□□□□□ -0.54
UBE2F-214ENST00000440223 RAB4BP61018 213 aa11.65□□□□□ -0.54
UBE2F-214ENST00000440223 RBMY1FQ15415 496 aaKnown RBP11.65□□□□□ -0.54
UBE2F-214ENST00000440223 SPANXN1Q5VSR9 72 aa11.65□□□□□ -0.54
UBE2F-214ENST00000440223 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
UBE2F-214ENST00000440223 GNRH2O43555 120 aa11.64□□□□□ -0.55
UBE2F-214ENST00000440223 HLA-DQA1P01909 254 aa11.64□□□□□ -0.55
UBE2F-214ENST00000440223 ARMS2P0C7Q2 107 aa11.64□□□□□ -0.55
UBE2F-214ENST00000440223 HTN1P15515 57 aa11.64□□□□□ -0.55
UBE2F-214ENST00000440223 SMIM15Q7Z3B0 74 aa11.64□□□□□ -0.55
UBE2F-214ENST00000440223 RETNQ9HD89 108 aa11.64□□□□□ -0.55
UBE2F-214ENST00000440223 IGHV3-16A0A0C4DH30 117 aa11.63□□□□□ -0.55
UBE2F-214ENST00000440223 CAMPP49913 170 aa11.63□□□□□ -0.55
UBE2F-214ENST00000440223 ZFP82Q8N141 532 aa11.63□□□□□ -0.55
UBE2F-214ENST00000440223 C1orf158Q8N1D5 194 aa11.63□□□□□ -0.55
UBE2F-214ENST00000440223 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
UBE2F-214ENST00000440223 SSBP4Q9BWG4 385 aaPredicted RBP11.63□□□□□ -0.55
UBE2F-214ENST00000440223 CNFNQ9BYD5 112 aa11.63□□□□□ -0.55
UBE2F-214ENST00000440223 A0A1B0GXF2 115 aa11.62□□□□□ -0.55
UBE2F-214ENST00000440223 SNURFLB1AK76 121 aa11.62□□□□□ -0.55
UBE2F-214ENST00000440223 GIG44P09565 113 aaPredicted RBP11.62□□□□□ -0.55
UBE2F-214ENST00000440223 TWIST1Q15672 202 aa11.62□□□□□ -0.55
UBE2F-214ENST00000440223 Q6ZWC4 215 aa11.62□□□□□ -0.55
UBE2F-214ENST00000440223 GNB1LQ9BYB4 327 aa11.62□□□□□ -0.55
UBE2F-214ENST00000440223 TRAPPC1Q9Y5R8 145 aa11.62□□□□□ -0.55
UBE2F-214ENST00000440223 MUC4Q99102 2169 aa11.62□□□□□ -0.55
UBE2F-214ENST00000440223 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
UBE2F-214ENST00000440223 RNASE3P12724 160 aaKnown RBP11.61□□□□□ -0.55
UBE2F-214ENST00000440223 RRN3P1Q2M238 152 aa11.61□□□□□ -0.55
UBE2F-214ENST00000440223 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
UBE2F-214ENST00000440223 FRZBQ92765 325 aa11.61□□□□□ -0.55
UBE2F-214ENST00000440223 C9orf85Q96MD7 179 aa11.61□□□□□ -0.55
UBE2F-214ENST00000440223 TP53TG3Q9ULZ0 132 aa11.61□□□□□ -0.55
UBE2F-214ENST00000440223 TP53TG1Q9Y2A0 90 aa11.61□□□□□ -0.55
UBE2F-214ENST00000440223 C1orf196B1AJZ1 125 aa11.6□□□□□ -0.55
UBE2F-214ENST00000440223 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
UBE2F-214ENST00000440223 ZNF705AQ6ZN79 300 aaPredicted RBP11.6□□□□□ -0.55
UBE2F-214ENST00000440223 ZNF493Q6ZR52 646 aa11.6□□□□□ -0.55
UBE2F-214ENST00000440223 CSNK1G2-AS1Q8NCQ2 148 aa11.6□□□□□ -0.55
UBE2F-214ENST00000440223 TMEM263Q8WUH6 116 aaKnown RBP11.6□□□□□ -0.55
UBE2F-214ENST00000440223 C16orf74Q96GX8 76 aa11.6□□□□□ -0.55
UBE2F-214ENST00000440223 SPXQ9BT56 116 aa11.6□□□□□ -0.55
UBE2F-214ENST00000440223 SCRT2Q9NQ03 307 aa11.6□□□□□ -0.55
UBE2F-214ENST00000440223 IGHV4-4A0A075B6R2 117 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 MUC21A0A0G2JKD1 596 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 MUC21A0A140T8X8 626 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 M0R381 172 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 SPRY2O43597 315 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 NTF3P20783 257 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 SSTP61278 116 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 TMEM136Q6ZRR5 245 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 ZNF575Q86XF7 245 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 MRPL18Q9H0U6 180 aaKnown RBP11.59□□□□□ -0.55
UBE2F-214ENST00000440223 MDFICQ9P1T7 246 aa11.59□□□□□ -0.55
UBE2F-214ENST00000440223 RAB5BP61020 215 aa11.58□□□□□ -0.56
UBE2F-214ENST00000440223 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
UBE2F-214ENST00000440223 OVOL2Q9BRP0 275 aa11.58□□□□□ -0.56
UBE2F-214ENST00000440223 EDA2RQ9HAV5 297 aa11.58□□□□□ -0.56
UBE2F-214ENST00000440223 M0R2P5 195 aa11.57□□□□□ -0.56
UBE2F-214ENST00000440223 NXPH4O95158 308 aa11.57□□□□□ -0.56
UBE2F-214ENST00000440223 APCSP02743 223 aa11.57□□□□□ -0.56
UBE2F-214ENST00000440223 FABP9Q0Z7S8 132 aa11.57□□□□□ -0.56
UBE2F-214ENST00000440223 MUC7Q8TAX7 377 aa11.57□□□□□ -0.56
UBE2F-214ENST00000440223 RNF183Q96D59 192 aa11.57□□□□□ -0.56
UBE2F-214ENST00000440223 GSN-AS1Q9NRJ2 163 aa11.57□□□□□ -0.56
UBE2F-214ENST00000440223 TENM3Q9P273 2699 aa11.56□□□□□ -0.56
UBE2F-214ENST00000440223 STAB2Q8WWQ8 2551 aa11.56□□□□□ -0.56
UBE2F-214ENST00000440223 C3orf84H3BNL1 204 aa11.56□□□□□ -0.56
UBE2F-214ENST00000440223 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
UBE2F-214ENST00000440223 PIK3CD-AS1Q5SR53 167 aa11.56□□□□□ -0.56
UBE2F-214ENST00000440223 C11orf72Q8NBR9 251 aa11.56□□□□□ -0.56
UBE2F-214ENST00000440223 RNASE8Q8TDE3 154 aaKnown RBP11.56□□□□□ -0.56
UBE2F-214ENST00000440223 PTH2Q96A98 100 aa11.56□□□□□ -0.56
UBE2F-214ENST00000440223 TMEM191AQ9H0A3 160 aa11.56□□□□□ -0.56
UBE2F-214ENST00000440223 TRGC2P03986 189 aa11.55□□□□□ -0.56
UBE2F-214ENST00000440223 NDUFAF3Q9BU61 184 aa11.55□□□□□ -0.56
UBE2F-214ENST00000440223 ZNF876PQ49A33 203 aa11.54□□□□□ -0.56
UBE2F-214ENST00000440223 DPH3P1Q9H4G8 78 aa11.54□□□□□ -0.56
UBE2F-214ENST00000440223 AZU1P20160 251 aa11.53□□□□□ -0.56
UBE2F-214ENST00000440223 IL17DQ8TAD2 202 aa11.53□□□□□ -0.56
UBE2F-214ENST00000440223 MSRB1Q9NZV6 116 aa11.53□□□□□ -0.56
UBE2F-214ENST00000440223 NBEAL2Q6ZNJ1 2754 aa11.52□□□□□ -0.56
UBE2F-214ENST00000440223 A8MWV9 139 aa11.52□□□□□ -0.57
UBE2F-214ENST00000440223 MIFP14174 115 aa11.52□□□□□ -0.57
UBE2F-214ENST00000440223 DMRTA1Q5VZB9 504 aa11.52□□□□□ -0.57
UBE2F-214ENST00000440223 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
UBE2F-214ENST00000440223 OR11H2Q8NH07 326 aa11.52□□□□□ -0.57
UBE2F-214ENST00000440223 TMA7Q9Y2S6 64 aaKnown RBP11.52□□□□□ -0.57
UBE2F-214ENST00000440223 NACAE9PAV3 2078 aa11.51□□□□□ -0.57
UBE2F-214ENST00000440223 TRGV1A0A0A0MS02 117 aa11.51□□□□□ -0.57
UBE2F-214ENST00000440223 PRM2P04554 102 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms