RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 KRTAP10-9P60411 292 aa9.32□□□□□ -0.92
NEK1-201ENST00000439128 ATRAIDQ6UW56 229 aa9.32□□□□□ -0.92
NEK1-201ENST00000439128 UNQ9165/PRO28630Q6UXU0 137 aa9.32□□□□□ -0.92
NEK1-201ENST00000439128 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
NEK1-201ENST00000439128 DEFB105AQ8NG35 78 aa9.32□□□□□ -0.92
NEK1-201ENST00000439128 DEFB131BA0A096LNP1 70 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 TRAV8-3A0A0A6YYJ7 113 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 IGHG4P01861 327 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 LENEPQ9Y5L5 61 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 MED13Q9UHV7 2174 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 FAM231BA6NCW3 169 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 LINC01548A6NM66 108 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 CT83Q5H943 113 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 C11orf71Q6IPW1 123 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 NCKAP5O14513 1909 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 SUMO4Q6EEV6 95 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 TEX22C9J3V5 150 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 UBE2AP49459 152 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 DEFB1P60022 68 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 DNAJC30Q96LL9 226 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 KLK12Q9UKR0 248 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 TIMM17AQ99595 171 aa9.31□□□□□ -0.92
NEK1-201ENST00000439128 ZNF479Q96JC4 524 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 ODF3BA8MYP8 253 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 COX7A2LO14548 114 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 EGR2P11161 476 aaPredicted RBP9.3□□□□□ -0.92
NEK1-201ENST00000439128 Q8N1Y9 231 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 ETDCA0A1B0GVM5 59 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HSD52Q0P140 79 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BKO60814 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 IGKV1-17P01599 117 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BJP06899 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 CRYGCP07315 174 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BOP23527 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BBP33778 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BDP58876 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BCP62807 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 DAZ2Q13117 558 aaKnown RBP9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST2H2BEQ16778 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.3□□□□□ -0.92
NEK1-201ENST00000439128 DAZ4Q86SG3 579 aaKnown RBP9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BHQ93079 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BNQ99877 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H2BMQ99879 126 aa9.3□□□□□ -0.92
NEK1-201ENST00000439128 DAZ3Q9NR90 486 aaKnown RBP9.3□□□□□ -0.92
NEK1-201ENST00000439128 TRBV24-1A0A075B6N3 115 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 TRAV8-4A0A0B4J246 113 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 NDUFA12Q9UI09 145 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 PRR20EP86478 221 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 PRR20CP86479 221 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 PRR20DP86480 221 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 PRR20BP86481 221 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 PRR20AP86496 221 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 VSIG2Q96IQ7 327 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 LINC01006Q8NI28 216 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
NEK1-201ENST00000439128 HIST1H4AP62805 103 aaKnown RBP9.29□□□□□ -0.92
NEK1-201ENST00000439128 TRAV26-1A0A087WT03 109 aa9.28□□□□□ -0.92
NEK1-201ENST00000439128 M0R2N4 97 aa9.28□□□□□ -0.92
NEK1-201ENST00000439128 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
NEK1-201ENST00000439128 CDSNQ15517 529 aa9.28□□□□□ -0.92
NEK1-201ENST00000439128 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
NEK1-201ENST00000439128 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
NEK1-201ENST00000439128 MRPL36Q9P0J6 103 aaKnown RBP9.28□□□□□ -0.92
NEK1-201ENST00000439128 NPYP01303 97 aa9.27□□□□□ -0.92
NEK1-201ENST00000439128 LTAP01374 205 aa9.27□□□□□ -0.92
NEK1-201ENST00000439128 ODF3L1Q8IXM7 274 aa9.27□□□□□ -0.92
NEK1-201ENST00000439128 PRO0255Q9UI72 69 aa9.27□□□□□ -0.93
NEK1-201ENST00000439128 LRCOL1A6NCL2 159 aa9.27□□□□□ -0.93
NEK1-201ENST00000439128 C20orf78Q9BR46 151 aa9.27□□□□□ -0.93
NEK1-201ENST00000439128 FAM222AQ5U5X8 452 aa9.27□□□□□ -0.93
NEK1-201ENST00000439128 BOD1L2Q8IYS8 172 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 GTSF1Q8WW33 167 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 IGLV2-18A0A075B6J9 118 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 WI2-2373I1.2A0A1W2PRP0 233 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 WIPF3A6NGB9 483 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 RBMY1FQ15415 496 aaKnown RBP9.26□□□□□ -0.93
NEK1-201ENST00000439128 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 PRAC2D3DTV9 90 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 DEFB114Q30KQ6 69 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 C10orf99Q6UWK7 81 aa9.26□□□□□ -0.93
NEK1-201ENST00000439128 STPG4Q8N801 248 aa9.25□□□□□ -0.93
NEK1-201ENST00000439128 CHD3Q12873 2000 aaKnown RBP9.25□□□□□ -0.93
NEK1-201ENST00000439128 IGKV2-24A0A0C4DH68 120 aa9.25□□□□□ -0.93
NEK1-201ENST00000439128 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
NEK1-201ENST00000439128 SLC25A29Q8N8R3 303 aa9.25□□□□□ -0.93
NEK1-201ENST00000439128 TRBV7-3A0A075B6L6 115 aa9.25□□□□□ -0.93
NEK1-201ENST00000439128 NDUFA1O15239 70 aa9.25□□□□□ -0.93
NEK1-201ENST00000439128 NDUFS5O43920 106 aa9.25□□□□□ -0.93
NEK1-201ENST00000439128 SAMD5Q5TGI4 173 aa9.25□□□□□ -0.93
NEK1-201ENST00000439128 SPG11Q96JI7 2443 aa9.24□□□□□ -0.93
NEK1-201ENST00000439128 E7EUB6 86 aa9.24□□□□□ -0.93
NEK1-201ENST00000439128 C3orf79P0CE67 100 aa9.24□□□□□ -0.93
NEK1-201ENST00000439128 CRYGDP07320 174 aa9.24□□□□□ -0.93
NEK1-201ENST00000439128 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
NEK1-201ENST00000439128 CCDC140Q96MF4 163 aa9.24□□□□□ -0.93
NEK1-201ENST00000439128 C20orf144Q9BQM9 153 aa9.24□□□□□ -0.93
NEK1-201ENST00000439128 NAA38Q9BRA0 125 aaKnown RBP9.24□□□□□ -0.93
NEK1-201ENST00000439128 TRAV4A0A0B4J268 109 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms