RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 LAGE3Q14657 143 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 GATD1Q8NB37 220 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 RPL39LQ96EH5 51 aaKnown RBP8.06□□□□□ -1.12
SCAF4-203ENST00000434667 KIR2DL4Q99706 377 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 NXT2Q9NPJ8 142 aaKnown RBP8.06□□□□□ -1.12
SCAF4-203ENST00000434667 E9PLD3 99 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 SIVA1O15304 175 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 FHL3Q13643 280 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 Q6AWC8 147 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 PIP4P1Q86T03 277 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 PLEKHB2Q96CS7 222 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 NBR2O15453 112 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 CD3EP07766 207 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 PF4V1P10720 104 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 GATA3P23771 443 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 NUP37Q8NFH4 326 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 DLX4Q92988 240 aaPredicted RBP8.05□□□□□ -1.12
SCAF4-203ENST00000434667 A0A1B0GW15 77 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 SHISA9B4DS77 424 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 CTSGP08311 255 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 TMEM30BQ3MIR4 351 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 RNF183Q96D59 192 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 PRADC1Q9BSG0 188 aa8.05□□□□□ -1.12
SCAF4-203ENST00000434667 CEACAM4O75871 244 aa8.04□□□□□ -1.12
SCAF4-203ENST00000434667 SRSF1Q07955 248 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCAF4-203ENST00000434667 C15orf32Q32M92 178 aa8.04□□□□□ -1.12
SCAF4-203ENST00000434667 AGPAT4-IT1Q9H0P7 198 aa8.04□□□□□ -1.12
SCAF4-203ENST00000434667 LRRK2Q5S007 2527 aa8.04□□□□□ -1.12
SCAF4-203ENST00000434667 NFE4Q86UQ8 179 aa8.04□□□□□ -1.12
SCAF4-203ENST00000434667 F6UB75 175 aa8.03□□□□□ -1.12
SCAF4-203ENST00000434667 G3V318 75 aa8.03□□□□□ -1.12
SCAF4-203ENST00000434667 PRR9Q5T870 116 aa8.03□□□□□ -1.12
SCAF4-203ENST00000434667 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
SCAF4-203ENST00000434667 CELSR2Q9HCU4 2923 aa8.03□□□□□ -1.12
SCAF4-203ENST00000434667 DPM3Q9P2X0 92 aa8.03□□□□□ -1.12
SCAF4-203ENST00000434667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.03□□□□□ -1.12
SCAF4-203ENST00000434667 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
SCAF4-203ENST00000434667 IGLV2-18A0A075B6J9 118 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 MRAP2Q96G30 205 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 METTL26Q96S19 204 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 SPXQ9BT56 116 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 IGLV11-55A0A075B6I3 123 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 TRBV6-1A0A0K0K1D8 114 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 TCF15Q12870 199 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
SCAF4-203ENST00000434667 LYPD1Q8N2G4 141 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 OR10J6PQ8NGY7 276 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 FAM57AQ8TBR7 257 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 TM2D2Q9BX73 214 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 C5orf64Q2M2E5 130 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 NRACQ8N912 160 aa8.02□□□□□ -1.13
SCAF4-203ENST00000434667 F8W1H4 67 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 CD7P09564 240 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 NTN5Q8WTR8 489 aaPredicted RBP8.01□□□□□ -1.13
SCAF4-203ENST00000434667 PSMG3-AS1Q96PY0 264 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 PRO0461Q9UI25 63 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 TRAV8-3A0A0A6YYJ7 113 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 RRN3P1Q2M238 152 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 C2orf66Q6UXQ4 117 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 MSRB2Q9Y3D2 182 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 Q6ZS92 163 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 Q8N8P6 123 aa8.01□□□□□ -1.13
SCAF4-203ENST00000434667 LY6LH3BQJ8 138 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 ASCL5Q7RTU5 278 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 KNCNA6PVL3 124 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 IGHV7-4-1A0A0J9YVY3 117 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 H7C1H1 209 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 LGALS1P09382 135 aaKnown RBP8□□□□□ -1.13
SCAF4-203ENST00000434667 C8orf86Q6ZUL3 223 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 C8orf31Q8N9H6 132 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 JPT2Q9H910 190 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 HIGD1BQ9P298 99 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 KAAG1Q9UBP8 84 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 ERG28Q9UKR5 140 aa8□□□□□ -1.13
SCAF4-203ENST00000434667 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
SCAF4-203ENST00000434667 A0A087WX48 190 aa7.99□□□□□ -1.13
SCAF4-203ENST00000434667 CDSNQ15517 529 aa7.99□□□□□ -1.13
SCAF4-203ENST00000434667 ZNF672Q499Z4 452 aaPredicted RBP7.99□□□□□ -1.13
SCAF4-203ENST00000434667 FAM159AQ6UWV7 190 aa7.99□□□□□ -1.13
SCAF4-203ENST00000434667 TRPT1Q86TN4 253 aaKnown RBP7.99□□□□□ -1.13
SCAF4-203ENST00000434667 PDE6HQ13956 83 aa7.99□□□□□ -1.13
SCAF4-203ENST00000434667 Q6ZS46 218 aa7.99□□□□□ -1.13
SCAF4-203ENST00000434667 C10orf126Q8N4M7 172 aa7.99□□□□□ -1.13
SCAF4-203ENST00000434667 XGP55808 180 aa7.99□□□□□ -1.13
SCAF4-203ENST00000434667 MYMXA0A1B0GTQ4 84 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 ASIPP42127 132 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
SCAF4-203ENST00000434667 CITED1Q99966 193 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 GNRH2O43555 120 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 RPL39P62891 51 aaKnown RBP7.98□□□□□ -1.13
SCAF4-203ENST00000434667 MRPL23Q16540 153 aaKnown RBP7.98□□□□□ -1.13
SCAF4-203ENST00000434667 DUX5Q96PT3 197 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 RAB1BQ9H0U4 201 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 TP53TG1Q9Y2A0 90 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 COX6CP09669 75 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 FOXC1Q12948 553 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
SCAF4-203ENST00000434667 CCL21O00585 134 aa7.97□□□□□ -1.13
SCAF4-203ENST00000434667 IGHV7-81A0A0B4J1V7 117 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms