RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 USMG5Q96IX5 58 aa13.1□□□□□ -0.31
SEMA3B-204ENST00000433753 SMIM2Q9BVW6 85 aa13.1□□□□□ -0.31
SEMA3B-204ENST00000433753 SAP30O75446 220 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 ATP5LO75964 103 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 MSMBP08118 114 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 ASIPP42127 132 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 CUBNO60494 3623 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 TRBV25-1A0A075B6N4 114 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 LENEPQ9Y5L5 61 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 K7ERJ3 54 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 RNASE3P12724 160 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 ATP6V0BQ99437 205 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 JPT2Q9H910 190 aa13.09□□□□□ -0.31
SEMA3B-204ENST00000433753 PRSS47A8MTI9 375 aa13.08□□□□□ -0.32
SEMA3B-204ENST00000433753 CHAC1Q9BUX1 264 aa13.08□□□□□ -0.32
SEMA3B-204ENST00000433753 MXRA5Q9NR99 2828 aa13.08□□□□□ -0.32
SEMA3B-204ENST00000433753 SUMO2P61956 95 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-204ENST00000433753 MAPK1IP1LQ8NDC0 245 aa13.08□□□□□ -0.32
SEMA3B-204ENST00000433753 PSMG4Q5JS54 123 aa13.07□□□□□ -0.32
SEMA3B-204ENST00000433753 MRAP2Q96G30 205 aa13.07□□□□□ -0.32
SEMA3B-204ENST00000433753 CSTL1Q9H114 145 aa13.07□□□□□ -0.32
SEMA3B-204ENST00000433753 A0A087WX48 190 aa13.07□□□□□ -0.32
SEMA3B-204ENST00000433753 A0A1W2PPM0 123 aa13.07□□□□□ -0.32
SEMA3B-204ENST00000433753 DAZ1Q9NQZ3 744 aaKnown RBP13.07□□□□□ -0.32
SEMA3B-204ENST00000433753 FBN2P35556 2912 aa13.06□□□□□ -0.32
SEMA3B-204ENST00000433753 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.06□□□□□ -0.32
SEMA3B-204ENST00000433753 IGKV3-20P01619 116 aa13.06□□□□□ -0.32
SEMA3B-204ENST00000433753 IGLV1-40P01703 118 aa13.06□□□□□ -0.32
SEMA3B-204ENST00000433753 FAM19A4Q96LR4 140 aa13.06□□□□□ -0.32
SEMA3B-204ENST00000433753 DPH3P1Q9H4G8 78 aa13.06□□□□□ -0.32
SEMA3B-204ENST00000433753 ANKRD17O75179 2603 aaKnown RBP13.06□□□□□ -0.32
SEMA3B-204ENST00000433753 RNF223E7ERA6 249 aa13.05□□□□□ -0.32
SEMA3B-204ENST00000433753 SCGB3A1Q96QR1 104 aa13.05□□□□□ -0.32
SEMA3B-204ENST00000433753 SMPXQ9UHP9 88 aa13.05□□□□□ -0.32
SEMA3B-204ENST00000433753 SPCS1Q9Y6A9 102 aa13.05□□□□□ -0.32
SEMA3B-204ENST00000433753 IGHV4-59P01825 116 aa13.05□□□□□ -0.32
SEMA3B-204ENST00000433753 OR5A1Q8NGJ0 315 aa13.05□□□□□ -0.32
SEMA3B-204ENST00000433753 SMIM13P0DJ93 91 aa13.04□□□□□ -0.32
SEMA3B-204ENST00000433753 HIGD1BQ9P298 99 aa13.04□□□□□ -0.32
SEMA3B-204ENST00000433753 TRAV12-3A0A0B4J271 114 aa13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 G3V4G9 280 aa13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 H3BUA1 57 aa13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 FABP2P12104 132 aa13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 NHP2Q9NX24 153 aaKnown RBP13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 A0A087WWL8 130 aa13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 NDUFS8O00217 210 aa13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 SAMD5Q5TGI4 173 aa13.03□□□□□ -0.32
SEMA3B-204ENST00000433753 ZNF688P0C7X2 276 aa13.02□□□□□ -0.32
SEMA3B-204ENST00000433753 CFHR3Q02985 330 aa13.02□□□□□ -0.32
SEMA3B-204ENST00000433753 DEFB112Q30KQ8 113 aa13.02□□□□□ -0.32
SEMA3B-204ENST00000433753 C2orf66Q6UXQ4 117 aa13.02□□□□□ -0.32
SEMA3B-204ENST00000433753 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.33
SEMA3B-204ENST00000433753 RIPPLY3P57055 190 aa13.02□□□□□ -0.33
SEMA3B-204ENST00000433753 DCANP1Q8TF63 244 aa13.02□□□□□ -0.33
SEMA3B-204ENST00000433753 TOMM6Q96B49 74 aa13.02□□□□□ -0.33
SEMA3B-204ENST00000433753 DUX5Q96PT3 197 aa13.01□□□□□ -0.33
SEMA3B-204ENST00000433753 CHTOPQ9Y3Y2 248 aaKnown RBP13.01□□□□□ -0.33
SEMA3B-204ENST00000433753 H7C1H1 209 aa13.01□□□□□ -0.33
SEMA3B-204ENST00000433753 ORMDL2Q53FV1 153 aa13.01□□□□□ -0.33
SEMA3B-204ENST00000433753 B4DSR2 109 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 F8VRH5 84 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 CD7P09564 240 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 ABCA12Q86UK0 2595 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 PTPN13Q12923 2485 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 EMP1P54849 157 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 FAM159AQ6UWV7 190 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 APRG1Q8IVJ8 170 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 CEND1Q8N111 149 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 C20orf78Q9BR46 151 aa13□□□□□ -0.33
SEMA3B-204ENST00000433753 BRI3O95415 125 aa12.99□□□□□ -0.33
SEMA3B-204ENST00000433753 LINC00315P59091 139 aa12.99□□□□□ -0.33
SEMA3B-204ENST00000433753 NEXN-AS1Q8NBZ9 246 aa12.99□□□□□ -0.33
SEMA3B-204ENST00000433753 BAALCQ8WXS3 180 aa12.99□□□□□ -0.33
SEMA3B-204ENST00000433753 KLLNB2CW77 178 aa12.99□□□□□ -0.33
SEMA3B-204ENST00000433753 DUSP14O95147 198 aaKnown RBP12.99□□□□□ -0.33
SEMA3B-204ENST00000433753 PLNP26678 52 aa12.99□□□□□ -0.33
SEMA3B-204ENST00000433753 PSMB8P28062 276 aa12.98□□□□□ -0.33
SEMA3B-204ENST00000433753 KIF25-AS1Q9Y6Z4 181 aa12.98□□□□□ -0.33
SEMA3B-204ENST00000433753 PRSS29PA6NIE9 313 aa12.98□□□□□ -0.33
SEMA3B-204ENST00000433753 F5H697 171 aa12.98□□□□□ -0.33
SEMA3B-204ENST00000433753 FAM74A4Q5TZK3 123 aa12.98□□□□□ -0.33
SEMA3B-204ENST00000433753 TEX15Q9BXT5 2789 aa12.98□□□□□ -0.33
SEMA3B-204ENST00000433753 ZNF462Q96JM2 2506 aa12.98□□□□□ -0.33
SEMA3B-204ENST00000433753 HLA-DRB4P13762 266 aa12.97□□□□□ -0.33
SEMA3B-204ENST00000433753 PHLDA1Q8WV24 401 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-204ENST00000433753 MDFICQ9P1T7 246 aa12.97□□□□□ -0.33
SEMA3B-204ENST00000433753 HLA-DRB4X5D2U9 266 aa12.97□□□□□ -0.33
SEMA3B-204ENST00000433753 TLN2Q9Y4G6 2542 aa12.97□□□□□ -0.33
SEMA3B-204ENST00000433753 RPL39P62891 51 aaKnown RBP12.97□□□□□ -0.33
SEMA3B-204ENST00000433753 MYO9AB2RTY4 2548 aa12.96□□□□□ -0.33
SEMA3B-204ENST00000433753 TRAV12-1A0A0B4J245 112 aa12.96□□□□□ -0.33
SEMA3B-204ENST00000433753 HIST1H4GQ99525 98 aa12.96□□□□□ -0.33
SEMA3B-204ENST00000433753 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
SEMA3B-204ENST00000433753 ID1P41134 155 aa12.96□□□□□ -0.34
SEMA3B-204ENST00000433753 SYNJ2BPP57105 145 aa12.96□□□□□ -0.34
SEMA3B-204ENST00000433753 SUMO4Q6EEV6 95 aa12.96□□□□□ -0.34
SEMA3B-204ENST00000433753 TGFAP01135 160 aa12.95□□□□□ -0.34
SEMA3B-204ENST00000433753 MED14OSP0DP75 135 aa12.95□□□□□ -0.34
SEMA3B-204ENST00000433753 OR11H12B2RN74 326 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms