RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 IGLV4-69A0A075B6H9 119 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 TRGV5A0A0B4J1U4 118 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGIPA6NJ69 53 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 USP17L23D6RBM5 183 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 BUB3O43684 328 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 ENSAO43768 121 aaKnown RBP4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGKV1-17P01599 117 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 PRSS2P07478 247 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 CFHR1Q03591 330 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 NSUN5P1Q3KNT7 163 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 Q5XG85 94 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 C22orf34Q6ZV56 151 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 NUP37Q8NFH4 326 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 LEAP2Q969E1 77 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 KLK15Q9H2R5 256 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 DKK4Q9UBT3 224 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 MYO9BQ13459 2157 aa4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 RAI1Q7Z5J4 1906 aaPredicted RBP4.27□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV5-10-1A0A0J9YXX1 117 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 TRBV6-5A0A0K0K1A5 114 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 CGB1A6NKQ9 187 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 NDUFB3O43676 98 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGLV1-44P01699 117 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 RFPL3SP0C7P2 107 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 UBE2E1P51965 193 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 C9orf47Q6ZRZ4 202 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 SLC25A45Q8N413 288 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 C3orf56Q8N813 242 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 KLHL30-AS1Q8NEE0 82 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 GAFA1Q96PS6 74 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 TTTY12Q9BZ98 90 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 MSRB1Q9NZV6 116 aa4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 MRPL36Q9P0J6 103 aaKnown RBP4.26□□□□□ -1.73
VTI1BP4-201ENST00000427516 TRAV13-2A0A0B4J235 113 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV1-18A0A0C4DH31 117 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 TRBV27A0A0K0K1C4 114 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 LINC01548A6NM66 108 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 H0YGX0 51 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 I3L3M4 83 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 MGPP08493 103 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 MAGEA5P43359 124 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 C10orf55Q5SWW7 151 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 C9orf139Q6ZV77 190 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 APRG1Q8IVJ8 170 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 TMEM86BQ8N661 226 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 LY6G5BQ8NDX9 201 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 LINC00477Q96M19 166 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 DEFB118Q96PH6 123 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 DSCR8Q96T75 97 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 AMELXQ99217 191 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 C19orf73Q9NVV2 129 aa4.25□□□□□ -1.73
VTI1BP4-201ENST00000427516 RP1P56715 2156 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 TRAV41A0A0B4J266 112 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV1-3A0A0C4DH29 117 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV1-58A0A0C4DH39 117 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV7-4-1A0A0J9YVY3 117 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV3-64DA0A0J9YX35 117 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 EPM2AB3EWF7 344 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 TEX22C9J3V5 150 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 LY6LH3BQJ8 138 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 SOCS3O14543 225 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 NXPH4O95158 308 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV3-48P01763 117 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 TRGV3P03979 118 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 BAALC-AS2P0C853 105 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 GATA1P15976 413 aaPredicted RBP4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV1-2P23083 117 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 ZNF80P51504 273 aaPredicted RBP4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 DAZ2Q13117 558 aaKnown RBP4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 CEMP1Q6PRD7 247 aaPredicted RBP4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 DAZ4Q86SG3 579 aaKnown RBP4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 DYNAPQ8N1N2 210 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 Q8TAT8 98 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 CFHR4Q92496 578 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 UPK3BQ9BT76 320 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 DAZ1Q9NQZ3 744 aaKnown RBP4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 DAZ3Q9NR90 486 aaKnown RBP4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 NDUFA12Q9UI09 145 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 KLK5Q9Y337 293 aaPredicted RBP4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 AGRNO00468 2067 aa4.24□□□□□ -1.73
VTI1BP4-201ENST00000427516 PRRC2BQ5JSZ5 2229 aaKnown RBP4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGLV3-9A0A075B6K5 115 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 TRAV26-2A0A0B4J265 109 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGKV3D-20A0A0C4DH25 116 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 JMJD7-PLA2G4BH0Y9G9 81 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 H3BQ85 93 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 K7EIM0 57 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 LYZL6O75951 148 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 RPL35AP18077 110 aaKnown RBP4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 TIRAPP58753 221 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 RNF152Q8N8N0 203 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 DYNLRB2Q8TF09 96 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 FAM19A4Q96LR4 140 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 C17orf77Q96MU5 243 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 CCL13Q99616 98 aa4.23□□□□□ -1.73
VTI1BP4-201ENST00000427516 TRAV7A0A075B6U4 112 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms