RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 MAP1LC3AQ9H492 121 aa16.16■□□□□ 0.18
CNEP1R1-202ENST00000427478 DEFB114Q30KQ6 69 aa16.16■□□□□ 0.18
CNEP1R1-202ENST00000427478 TSSC4Q9Y5U2 329 aaPredicted RBP16.16■□□□□ 0.18
CNEP1R1-202ENST00000427478 TRAV26-2A0A0B4J265 109 aa16.15■□□□□ 0.18
CNEP1R1-202ENST00000427478 ATOH7Q8N100 152 aa16.15■□□□□ 0.18
CNEP1R1-202ENST00000427478 LAMTOR2Q9Y2Q5 125 aa16.15■□□□□ 0.18
CNEP1R1-202ENST00000427478 TRAV2A0A0B4J234 112 aa16.15■□□□□ 0.18
CNEP1R1-202ENST00000427478 CD7P09564 240 aa16.15■□□□□ 0.18
CNEP1R1-202ENST00000427478 TSPOP30536 169 aa16.15■□□□□ 0.18
CNEP1R1-202ENST00000427478 CD300EQ496F6 205 aaPredicted RBP16.15■□□□□ 0.18
CNEP1R1-202ENST00000427478 ZNF124Q15973 351 aa16.14■□□□□ 0.17
CNEP1R1-202ENST00000427478 AMTNQ6UX39 209 aa16.14■□□□□ 0.17
CNEP1R1-202ENST00000427478 HSPB8Q9UJY1 196 aa16.14■□□□□ 0.17
CNEP1R1-202ENST00000427478 SORL1Q92673 2214 aa16.14■□□□□ 0.17
CNEP1R1-202ENST00000427478 A0A096LNJ9 63 aa16.13■□□□□ 0.17
CNEP1R1-202ENST00000427478 SYS1-DBNDD2H3BUS1 97 aa16.13■□□□□ 0.17
CNEP1R1-202ENST00000427478 DEFA6Q01524 100 aa16.13■□□□□ 0.17
CNEP1R1-202ENST00000427478 FXYD7P58549 80 aa16.13■□□□□ 0.17
CNEP1R1-202ENST00000427478 MTORP42345 2549 aa16.12■□□□□ 0.17
CNEP1R1-202ENST00000427478 MUC4Q99102 2169 aa16.12■□□□□ 0.17
CNEP1R1-202ENST00000427478 OR2K2Q8NGT1 345 aa16.12■□□□□ 0.17
CNEP1R1-202ENST00000427478 C14orf178Q8N769 122 aaPredicted RBP16.12■□□□□ 0.17
CNEP1R1-202ENST00000427478 MAP1LC3CQ9BXW4 147 aa16.12■□□□□ 0.17
CNEP1R1-202ENST00000427478 MAP6D1Q9H9H5 199 aa16.12■□□□□ 0.17
CNEP1R1-202ENST00000427478 HLA-DRB4P13762 266 aa16.11■□□□□ 0.17
CNEP1R1-202ENST00000427478 NRACQ8N912 160 aa16.11■□□□□ 0.17
CNEP1R1-202ENST00000427478 HLA-DRB4X5D2U9 266 aa16.11■□□□□ 0.17
CNEP1R1-202ENST00000427478 H0Y8G0 127 aa16.1■□□□□ 0.17
CNEP1R1-202ENST00000427478 CRXO43186 299 aaPredicted RBP16.1■□□□□ 0.17
CNEP1R1-202ENST00000427478 C20orf144Q9BQM9 153 aa16.1■□□□□ 0.17
CNEP1R1-202ENST00000427478 DPH3P1Q9H4G8 78 aa16.1■□□□□ 0.17
CNEP1R1-202ENST00000427478 SPATA45Q537H7 98 aa16.1■□□□□ 0.17
CNEP1R1-202ENST00000427478 C14orf144Q96I85 54 aa16.1■□□□□ 0.17
CNEP1R1-202ENST00000427478 H3BMM0 161 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 NXPH4O95158 308 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 NDUFA7O95182 113 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 MRAP2Q96G30 205 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 AP1S3Q96PC3 154 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 JMJD8Q96S16 334 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 ZNF747Q9BV97 191 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 OR4C46A6NHA9 309 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 HBDP02042 147 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 MGPP08493 103 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 SPAG8Q99932 426 aaPredicted RBP16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 NXT2Q9NPJ8 142 aaKnown RBP16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 HIVEP2P31629 2446 aa16.09■□□□□ 0.17
CNEP1R1-202ENST00000427478 IGHV1OR15-1A0A075B7D0 117 aa16.08■□□□□ 0.16
CNEP1R1-202ENST00000427478 MAJINQ3KP22 176 aa16.08■□□□□ 0.16
CNEP1R1-202ENST00000427478 Q8N1Y9 231 aa16.08■□□□□ 0.16
CNEP1R1-202ENST00000427478 NDUFAF3Q9BU61 184 aa16.08■□□□□ 0.16
CNEP1R1-202ENST00000427478 IGHV3-16A0A0C4DH30 117 aa16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 RBMY1BA6NDE4 496 aaKnown RBP16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 RBMY1EA6NEQ0 496 aaKnown RBP16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 RBMY1DP0C7P1 496 aaKnown RBP16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 MCRIP2Q9BUT9 160 aaKnown RBP16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 ZNF256Q9Y2P7 627 aaPredicted RBP16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 A8MTW9 85 aa16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 PROK1P58294 105 aa16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 MDFICQ9P1T7 246 aa16.07■□□□□ 0.16
CNEP1R1-202ENST00000427478 C20orf202A1L168 122 aa16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 RBMY1A1P0DJD3 496 aaKnown RBP16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 RBMY1CP0DJD4 496 aa16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 RBMY1FQ15415 496 aaKnown RBP16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 ZNF705AQ6ZN79 300 aaPredicted RBP16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 OTOGQ6ZRI0 2925 aa16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 LINC01546A6NGU7 62 aa16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 INAFM1C9JVW0 142 aa16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 PET117Q6UWS5 81 aa16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 Q8N8P6 123 aa16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 C9orf85Q96MD7 179 aa16.06■□□□□ 0.16
CNEP1R1-202ENST00000427478 WNK1Q9H4A3 2382 aa16.05■□□□□ 0.16
CNEP1R1-202ENST00000427478 IGLV2-18A0A075B6J9 118 aa16.04■□□□□ 0.16
CNEP1R1-202ENST00000427478 TRAV25A0A0B4J276 109 aa16.04■□□□□ 0.16
CNEP1R1-202ENST00000427478 NSUN5P1Q3KNT7 163 aa16.04■□□□□ 0.16
CNEP1R1-202ENST00000427478 JPT2Q9H910 190 aa16.04■□□□□ 0.16
CNEP1R1-202ENST00000427478 TRAV9-2A0A087WT02 112 aa16.03■□□□□ 0.16
CNEP1R1-202ENST00000427478 ADARB2-AS1A8MUL3 147 aa16.03■□□□□ 0.16
CNEP1R1-202ENST00000427478 PRSS47A8MTI9 375 aa16.03■□□□□ 0.16
CNEP1R1-202ENST00000427478 RASL10AQ92737 203 aa16.03■□□□□ 0.16
CNEP1R1-202ENST00000427478 RPL39LQ96EH5 51 aaKnown RBP16.03■□□□□ 0.16
CNEP1R1-202ENST00000427478 PMCHL2Q9BQD1 86 aa16.03■□□□□ 0.16
CNEP1R1-202ENST00000427478 MIEN1Q9BRT3 115 aa16.03■□□□□ 0.16
CNEP1R1-202ENST00000427478 SMIM17P0DL12 118 aa16.02■□□□□ 0.16
CNEP1R1-202ENST00000427478 ODF3L2Q3SX64 289 aa16.02■□□□□ 0.16
CNEP1R1-202ENST00000427478 KIF25-AS1Q9Y6Z4 181 aa16.02■□□□□ 0.16
CNEP1R1-202ENST00000427478 CBY3A6NI87 242 aa16.01■□□□□ 0.15
CNEP1R1-202ENST00000427478 DEFB125Q8N687 156 aa16.01■□□□□ 0.15
CNEP1R1-202ENST00000427478 FCER1GP30273 86 aa16.01■□□□□ 0.15
CNEP1R1-202ENST00000427478 CTAG1AP78358 180 aa16.01■□□□□ 0.15
CNEP1R1-202ENST00000427478 LINC01545Q5VT33 79 aa16.01■□□□□ 0.15
CNEP1R1-202ENST00000427478 TRGV11A0A075B6L2 103 aa16■□□□□ 0.15
CNEP1R1-202ENST00000427478 A0A087WWL8 130 aa16■□□□□ 0.15
CNEP1R1-202ENST00000427478 SAP30O75446 220 aa16■□□□□ 0.15
CNEP1R1-202ENST00000427478 HTN1P15515 57 aa16■□□□□ 0.15
CNEP1R1-202ENST00000427478 TCAPO15273 167 aa16■□□□□ 0.15
CNEP1R1-202ENST00000427478 LINC00315P59091 139 aa16■□□□□ 0.15
CNEP1R1-202ENST00000427478 C18orf15Q96N68 181 aa16■□□□□ 0.15
CNEP1R1-202ENST00000427478 SMIM2Q9BVW6 85 aa16■□□□□ 0.15
CNEP1R1-202ENST00000427478 IGLL1P15814 213 aa15.99■□□□□ 0.15
CNEP1R1-202ENST00000427478 POM121L12Q8N7R1 296 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms