RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 RAB14P61106 215 aa13.66□□□□□ -0.22
CCDC107-206ENST00000426546 SDF2L1Q9HCN8 221 aa13.66□□□□□ -0.22
CCDC107-206ENST00000426546 SCRT2Q9NQ03 307 aa13.66□□□□□ -0.22
CCDC107-206ENST00000426546 EPDR1Q9UM22 224 aa13.66□□□□□ -0.22
CCDC107-206ENST00000426546 C9JCJ5 164 aa13.65□□□□□ -0.22
CCDC107-206ENST00000426546 TYMSP04818 313 aa13.65□□□□□ -0.22
CCDC107-206ENST00000426546 GYPEP15421 78 aa13.65□□□□□ -0.22
CCDC107-206ENST00000426546 NDFIP1Q9BT67 221 aa13.65□□□□□ -0.22
CCDC107-206ENST00000426546 TRAV9-2A0A087WT02 112 aa13.64□□□□□ -0.23
CCDC107-206ENST00000426546 K7EP13 123 aa13.64□□□□□ -0.23
CCDC107-206ENST00000426546 TCRAP04437 139 aa13.64□□□□□ -0.23
CCDC107-206ENST00000426546 NFE4Q86UQ8 179 aa13.64□□□□□ -0.23
CCDC107-206ENST00000426546 OR4C5Q8NGB2 326 aa13.64□□□□□ -0.23
CCDC107-206ENST00000426546 TXNDC17Q9BRA2 123 aa13.64□□□□□ -0.23
CCDC107-206ENST00000426546 LY96Q9Y6Y9 160 aa13.64□□□□□ -0.23
CCDC107-206ENST00000426546 K7EQM0 130 aa13.63□□□□□ -0.23
CCDC107-206ENST00000426546 BCL2P10415 239 aa13.63□□□□□ -0.23
CCDC107-206ENST00000426546 PEX7O00628 323 aa13.62□□□□□ -0.23
CCDC107-206ENST00000426546 HIST1H2BAQ96A08 127 aa13.62□□□□□ -0.23
CCDC107-206ENST00000426546 DNAH5Q8TE73 4624 aa13.62□□□□□ -0.23
CCDC107-206ENST00000426546 TAGLN2P37802 199 aaKnown RBP13.61□□□□□ -0.23
CCDC107-206ENST00000426546 ERVFC1-1P60608 527 aa13.61□□□□□ -0.23
CCDC107-206ENST00000426546 SH2D6Q7Z4S9 175 aa13.61□□□□□ -0.23
CCDC107-206ENST00000426546 WFDC10BQ8IUB3 73 aa13.61□□□□□ -0.23
CCDC107-206ENST00000426546 CYB561D1Q8N8Q1 229 aa13.61□□□□□ -0.23
CCDC107-206ENST00000426546 SGK494Q96LW2 274 aa13.61□□□□□ -0.23
CCDC107-206ENST00000426546 TCEAL7Q9BRU2 100 aa13.61□□□□□ -0.23
CCDC107-206ENST00000426546 VAX2Q9UIW0 290 aa13.61□□□□□ -0.23
CCDC107-206ENST00000426546 RBFOX3A6NFN3 312 aa13.6□□□□□ -0.23
CCDC107-206ENST00000426546 EREGO14944 169 aa13.6□□□□□ -0.23
CCDC107-206ENST00000426546 DNAH10OSP0CZ25 163 aa13.6□□□□□ -0.23
CCDC107-206ENST00000426546 MEF2BQ02080 365 aaPredicted RBP13.6□□□□□ -0.23
CCDC107-206ENST00000426546 TRAV34A0A0B4J273 112 aa13.59□□□□□ -0.23
CCDC107-206ENST00000426546 SCO2A0A1W2PP80 73 aa13.59□□□□□ -0.23
CCDC107-206ENST00000426546 IGLV2-11P01706 119 aa13.59□□□□□ -0.23
CCDC107-206ENST00000426546 GATA1P15976 413 aaPredicted RBP13.59□□□□□ -0.23
CCDC107-206ENST00000426546 EVI2AP22794 236 aa13.59□□□□□ -0.23
CCDC107-206ENST00000426546 TOR2AQ5JU69 321 aa13.59□□□□□ -0.23
CCDC107-206ENST00000426546 EIF5A2Q9GZV4 153 aaKnown RBP13.59□□□□□ -0.23
CCDC107-206ENST00000426546 PGPEP1Q9NXJ5 209 aa13.59□□□□□ -0.23
CCDC107-206ENST00000426546 PSG8Q9UQ74 426 aa13.59□□□□□ -0.23
CCDC107-206ENST00000426546 TNFRSF18Q9Y5U5 241 aa13.59□□□□□ -0.23
CCDC107-206ENST00000426546 FBLL1A6NHQ2 334 aaKnown RBP13.58□□□□□ -0.24
CCDC107-206ENST00000426546 CIDEAO60543 219 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 GCGP01275 180 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 PFN1P07737 140 aaKnown RBP13.58□□□□□ -0.24
CCDC107-206ENST00000426546 AKR1C3P42330 323 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 ZNF80P51504 273 aaPredicted RBP13.58□□□□□ -0.24
CCDC107-206ENST00000426546 TIRAPP58753 221 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 FLI1Q01543 452 aaPredicted RBP13.58□□□□□ -0.24
CCDC107-206ENST00000426546 ZNF876PQ49A33 203 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 ZNF506Q5JVG8 444 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 CLLU1Q5K131 121 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 CDPF1Q6NVV7 123 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 TMEM75Q8N9X5 138 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 LINC00479Q96M42 142 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 FAM210AQ96ND0 272 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 MSRB1Q9NZV6 116 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 C11orf21Q9P2W6 132 aa13.58□□□□□ -0.24
CCDC107-206ENST00000426546 HERC1Q15751 4861 aa13.57□□□□□ -0.24
CCDC107-206ENST00000426546 LOC100131303A0A0U1RQF7 123 aa13.57□□□□□ -0.24
CCDC107-206ENST00000426546 SMUG1Q53HV7 270 aa13.57□□□□□ -0.24
CCDC107-206ENST00000426546 PRNTQ86SH4 94 aa13.57□□□□□ -0.24
CCDC107-206ENST00000426546 PDE6DO43924 150 aa13.56□□□□□ -0.24
CCDC107-206ENST00000426546 C10orf126Q8N4M7 172 aa13.56□□□□□ -0.24
CCDC107-206ENST00000426546 NHLRC2Q8NBF2 726 aa13.56□□□□□ -0.24
CCDC107-206ENST00000426546 C9orf85Q96MD7 179 aa13.56□□□□□ -0.24
CCDC107-206ENST00000426546 RS1O15537 224 aa13.55□□□□□ -0.24
CCDC107-206ENST00000426546 UBE2G1P62253 170 aa13.55□□□□□ -0.24
CCDC107-206ENST00000426546 SAPCD1Q5SSQ6 148 aa13.55□□□□□ -0.24
CCDC107-206ENST00000426546 CFAP126Q5VTH2 177 aa13.55□□□□□ -0.24
CCDC107-206ENST00000426546 C11orf52Q96A22 123 aa13.55□□□□□ -0.24
CCDC107-206ENST00000426546 PTH2Q96A98 100 aa13.55□□□□□ -0.24
CCDC107-206ENST00000426546 MED9Q9NWA0 146 aa13.55□□□□□ -0.24
CCDC107-206ENST00000426546 TRBV6-4A0A1B0GX49 114 aa13.54□□□□□ -0.24
CCDC107-206ENST00000426546 SLC25A29Q8N8R3 303 aa13.54□□□□□ -0.24
CCDC107-206ENST00000426546 FMC1Q96HJ9 113 aa13.54□□□□□ -0.24
CCDC107-206ENST00000426546 A0A087WTM6 91 aa13.53□□□□□ -0.24
CCDC107-206ENST00000426546 CRYGDP07320 174 aa13.53□□□□□ -0.24
CCDC107-206ENST00000426546 RHOHQ15669 191 aa13.53□□□□□ -0.24
CCDC107-206ENST00000426546 PRADC1Q9BSG0 188 aa13.53□□□□□ -0.24
CCDC107-206ENST00000426546 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
CCDC107-206ENST00000426546 S100A9P06702 114 aaKnown RBP13.52□□□□□ -0.25
CCDC107-206ENST00000426546 RNASE3P12724 160 aaKnown RBP13.52□□□□□ -0.25
CCDC107-206ENST00000426546 Q86TA4 180 aa13.52□□□□□ -0.25
CCDC107-206ENST00000426546 DERL1Q9BUN8 251 aa13.52□□□□□ -0.25
CCDC107-206ENST00000426546 PGPEP1LA6NFU8 196 aa13.51□□□□□ -0.25
CCDC107-206ENST00000426546 MGST1P10620 155 aaKnown RBP13.51□□□□□ -0.25
CCDC107-206ENST00000426546 RPL35P42766 123 aaKnown RBP13.51□□□□□ -0.25
CCDC107-206ENST00000426546 CEBPGP53567 150 aa13.51□□□□□ -0.25
CCDC107-206ENST00000426546 PEA15Q15121 130 aa13.51□□□□□ -0.25
CCDC107-206ENST00000426546 LINC01556Q5JQF7 62 aa13.51□□□□□ -0.25
CCDC107-206ENST00000426546 TRBV6-1A0A0K0K1D8 114 aa13.5□□□□□ -0.25
CCDC107-206ENST00000426546 TMEM250H0YL14 139 aa13.5□□□□□ -0.25
CCDC107-206ENST00000426546 SRSF3P84103 164 aaKnown RBP13.5□□□□□ -0.25
CCDC107-206ENST00000426546 PIK3CD-AS1Q5SR53 167 aa13.5□□□□□ -0.25
CCDC107-206ENST00000426546 IGHV3-73A0A0B4J1V6 119 aa13.49□□□□□ -0.25
CCDC107-206ENST00000426546 TRAV8-6A0A0B4J262 113 aa13.49□□□□□ -0.25
CCDC107-206ENST00000426546 RAB19A4D1S5 217 aa13.49□□□□□ -0.25
CCDC107-206ENST00000426546 EPM2AB3EWF7 344 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms