RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
ACTB-204ENST00000425660 INSL3P51460 131 aa11.18□□□□□ -0.62
ACTB-204ENST00000425660 IQCJQ1A5X6 159 aa11.18□□□□□ -0.62
ACTB-204ENST00000425660 OR10D4PQ8NGN7 298 aa11.18□□□□□ -0.62
ACTB-204ENST00000425660 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
ACTB-204ENST00000425660 C19orf73Q9NVV2 129 aa11.18□□□□□ -0.62
ACTB-204ENST00000425660 ATRQ13535 2644 aa11.17□□□□□ -0.62
ACTB-204ENST00000425660 CD7P09564 240 aa11.17□□□□□ -0.62
ACTB-204ENST00000425660 SMIM6P0DI80 62 aa11.17□□□□□ -0.62
ACTB-204ENST00000425660 RBMY1A1P0DJD3 496 aaKnown RBP11.17□□□□□ -0.62
ACTB-204ENST00000425660 RBMY1CP0DJD4 496 aa11.17□□□□□ -0.62
ACTB-204ENST00000425660 RAB4AP20338 218 aa11.17□□□□□ -0.62
ACTB-204ENST00000425660 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
ACTB-204ENST00000425660 MRPL51Q4U2R6 128 aaKnown RBP11.17□□□□□ -0.62
ACTB-204ENST00000425660 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
ACTB-204ENST00000425660 PHLDA3Q9Y5J5 127 aa11.17□□□□□ -0.62
ACTB-204ENST00000425660 IGHV3-16A0A0C4DH30 117 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 D6R8Y8 96 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 EVI2AP22794 236 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 ORMDL3Q8N138 153 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 Q8N1Y9 231 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 C20orf144Q9BQM9 153 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 PPBPP02775 128 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 FXYD7P58549 80 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 SMIM15Q7Z3B0 74 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 STHQ8IWL8 128 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 URB1-AS1Q96HZ7 61 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
ACTB-204ENST00000425660 M0R381 172 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 LINC00467Q9BRT7 94 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
ACTB-204ENST00000425660 CKS2P33552 79 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 KRTAP24-1Q3LI83 254 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 PYY3Q5JQD4 70 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 NIT1Q86X76 327 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
ACTB-204ENST00000425660 PRELID3AQ96N28 172 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 LAMTOR2Q9Y2Q5 125 aa11.14□□□□□ -0.63
ACTB-204ENST00000425660 TRGV11A0A075B6L2 103 aa11.13□□□□□ -0.63
ACTB-204ENST00000425660 C9orf66Q5T8R8 295 aa11.13□□□□□ -0.63
ACTB-204ENST00000425660 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
ACTB-204ENST00000425660 C12orf57Q99622 126 aa11.13□□□□□ -0.63
ACTB-204ENST00000425660 SPRY2O43597 315 aa11.12□□□□□ -0.63
ACTB-204ENST00000425660 INSP01308 110 aa11.12□□□□□ -0.63
ACTB-204ENST00000425660 LINC00614P0C842 121 aa11.12□□□□□ -0.63
ACTB-204ENST00000425660 NUTF2P61970 127 aaKnown RBP11.12□□□□□ -0.63
ACTB-204ENST00000425660 SAMD10Q9BYL1 202 aa11.12□□□□□ -0.63
ACTB-204ENST00000425660 HSBP1O75506 76 aa11.12□□□□□ -0.63
ACTB-204ENST00000425660 AMTP48728 403 aa11.12□□□□□ -0.63
ACTB-204ENST00000425660 WFDC9Q8NEX5 89 aa11.12□□□□□ -0.63
ACTB-204ENST00000425660 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
ACTB-204ENST00000425660 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
ACTB-204ENST00000425660 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
ACTB-204ENST00000425660 CBY3A6NI87 242 aa11.1□□□□□ -0.63
ACTB-204ENST00000425660 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
ACTB-204ENST00000425660 NPYP01303 97 aa11.1□□□□□ -0.63
ACTB-204ENST00000425660 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
ACTB-204ENST00000425660 DEFB125Q8N687 156 aa11.1□□□□□ -0.63
ACTB-204ENST00000425660 POM121L12Q8N7R1 296 aa11.1□□□□□ -0.63
ACTB-204ENST00000425660 MRAP2Q96G30 205 aa11.1□□□□□ -0.63
ACTB-204ENST00000425660 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
ACTB-204ENST00000425660 MUC4Q99102 2169 aa11.1□□□□□ -0.63
ACTB-204ENST00000425660 NCR2O95944 276 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 Q6ZWC4 215 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 C14orf178Q8N769 122 aaPredicted RBP11.09□□□□□ -0.63
ACTB-204ENST00000425660 MCRIP2Q9BUT9 160 aaKnown RBP11.09□□□□□ -0.63
ACTB-204ENST00000425660 WFDC10AQ9H1F0 79 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 WIPF1O43516 503 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 PMCHP20382 165 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 FAM19A2Q8N3H0 131 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 ZNF747Q9BV97 191 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 XCL2Q9UBD3 114 aa11.09□□□□□ -0.63
ACTB-204ENST00000425660 PRSS47A8MTI9 375 aa11.08□□□□□ -0.64
ACTB-204ENST00000425660 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
ACTB-204ENST00000425660 GIG44P09565 113 aaPredicted RBP11.08□□□□□ -0.64
ACTB-204ENST00000425660 LINC00315P59091 139 aa11.08□□□□□ -0.64
ACTB-204ENST00000425660 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
ACTB-204ENST00000425660 GSN-AS1Q9NRJ2 163 aa11.08□□□□□ -0.64
ACTB-204ENST00000425660 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
ACTB-204ENST00000425660 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
ACTB-204ENST00000425660 PIK3CD-AS1Q5SR53 167 aa11.07□□□□□ -0.64
ACTB-204ENST00000425660 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
ACTB-204ENST00000425660 NRACQ8N912 160 aa11.07□□□□□ -0.64
ACTB-204ENST00000425660 PRSS3P2Q8NHM4 247 aa11.07□□□□□ -0.64
ACTB-204ENST00000425660 LINC01587Q99440 93 aa11.07□□□□□ -0.64
ACTB-204ENST00000425660 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
ACTB-204ENST00000425660 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
ACTB-204ENST00000425660 PTH2Q96A98 100 aa11.07□□□□□ -0.64
ACTB-204ENST00000425660 TRAV26-2A0A0B4J265 109 aa11.06□□□□□ -0.64
ACTB-204ENST00000425660 LINC01546A6NGU7 62 aa11.06□□□□□ -0.64
ACTB-204ENST00000425660 GATA1P15976 413 aaPredicted RBP11.06□□□□□ -0.64
ACTB-204ENST00000425660 MORN3Q6PF18 240 aaPredicted RBP11.06□□□□□ -0.64
ACTB-204ENST00000425660 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
ACTB-204ENST00000425660 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
ACTB-204ENST00000425660 HTN1P15515 57 aa11.05□□□□□ -0.64
ACTB-204ENST00000425660 ZNF415Q09FC8 603 aa11.05□□□□□ -0.64
ACTB-204ENST00000425660 ZNF876PQ49A33 203 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms