RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 CLEC3BP05452 202 aa9.74□□□□□ -0.85
TOP2B-203ENST00000424225 EDN2P20800 178 aa9.74□□□□□ -0.85
TOP2B-203ENST00000424225 OR11H6Q8NGC7 330 aa9.74□□□□□ -0.85
TOP2B-203ENST00000424225 C2CD3Q4AC94 2353 aa9.74□□□□□ -0.85
TOP2B-203ENST00000424225 RPL7P18124 248 aaKnown RBP9.74□□□□□ -0.85
TOP2B-203ENST00000424225 RPL39P62891 51 aaKnown RBP9.74□□□□□ -0.85
TOP2B-203ENST00000424225 ANXA2RQ3ZCQ2 193 aa9.74□□□□□ -0.85
TOP2B-203ENST00000424225 SBSPONQ8IVN8 264 aa9.74□□□□□ -0.85
TOP2B-203ENST00000424225 VKORC1Q9BQB6 163 aa9.74□□□□□ -0.85
TOP2B-203ENST00000424225 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 TMEM238LA0A1B0GVL6 79 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 LINC01619G3V211 115 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 H7C1H1 209 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 NDUFA11Q86Y39 141 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 A0A0J9YY99 117 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 ZFP36P26651 326 aaKnown RBP9.73□□□□□ -0.85
TOP2B-203ENST00000424225 TRPT1Q86TN4 253 aaKnown RBP9.73□□□□□ -0.85
TOP2B-203ENST00000424225 RAB1BQ9H0U4 201 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 C15orf32Q32M92 178 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 MYOZ3Q8TDC0 251 aa9.73□□□□□ -0.85
TOP2B-203ENST00000424225 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
TOP2B-203ENST00000424225 GNRH2O43555 120 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 PLNP26678 52 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 Q8N9W7 124 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 LINC01560Q8TB33 94 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
TOP2B-203ENST00000424225 IGHV3-30P01768 117 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 IGHV3-30-5P0DP03 117 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 HES1Q14469 280 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 ZFAND2AQ8N6M9 145 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 NCBP2LA6PVI3 153 aaKnown RBP9.72□□□□□ -0.85
TOP2B-203ENST00000424225 F6UB75 175 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 RNF5Q99942 180 aa9.72□□□□□ -0.85
TOP2B-203ENST00000424225 CITED1Q99966 193 aa9.71□□□□□ -0.85
TOP2B-203ENST00000424225 SS18L2Q9UHA2 77 aa9.71□□□□□ -0.85
TOP2B-203ENST00000424225 ATRXP46100 2492 aa9.71□□□□□ -0.86
TOP2B-203ENST00000424225 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.71□□□□□ -0.86
TOP2B-203ENST00000424225 ZNF815PA8K554 130 aa9.71□□□□□ -0.86
TOP2B-203ENST00000424225 TRBV12-3P01733 135 aa9.71□□□□□ -0.86
TOP2B-203ENST00000424225 ANKRD29Q8N6D5 301 aa9.71□□□□□ -0.86
TOP2B-203ENST00000424225 DYNLRB1Q9NP97 96 aa9.71□□□□□ -0.86
TOP2B-203ENST00000424225 DPM3Q9P2X0 92 aa9.71□□□□□ -0.86
TOP2B-203ENST00000424225 SETD2Q9BYW2 2564 aaPredicted RBP9.71□□□□□ -0.86
TOP2B-203ENST00000424225 RNASE3P12724 160 aaKnown RBP9.7□□□□□ -0.86
TOP2B-203ENST00000424225 C2orf66Q6UXQ4 117 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 M0R381 172 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 LOC107984156A0A0G2JMH3 177 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 CENPVL3A0A0U1RRI6 287 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 IGIPA6NJ69 53 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 SUMO2P61956 95 aaKnown RBP9.7□□□□□ -0.86
TOP2B-203ENST00000424225 SCGB2A2Q13296 93 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 C9orf47Q6ZRZ4 202 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 ARL17AQ8IVW1 177 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 ITLN2Q8WWU7 325 aaPredicted RBP9.7□□□□□ -0.86
TOP2B-203ENST00000424225 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
TOP2B-203ENST00000424225 UNQ9165/PRO28630Q6UXU0 137 aa9.69□□□□□ -0.86
TOP2B-203ENST00000424225 CLEC19AQ6UXS0 136 aa9.69□□□□□ -0.86
TOP2B-203ENST00000424225 OR11H12B2RN74 326 aa9.69□□□□□ -0.86
TOP2B-203ENST00000424225 ATP6V0E1O15342 81 aa9.69□□□□□ -0.86
TOP2B-203ENST00000424225 Q6ZSV7 163 aa9.69□□□□□ -0.86
TOP2B-203ENST00000424225 OR11H1Q8NG94 326 aa9.69□□□□□ -0.86
TOP2B-203ENST00000424225 OR11H2Q8NH07 326 aa9.69□□□□□ -0.86
TOP2B-203ENST00000424225 RAXQ9Y2V3 346 aa9.69□□□□□ -0.86
TOP2B-203ENST00000424225 RBAKDNA6NC62 111 aa9.68□□□□□ -0.86
TOP2B-203ENST00000424225 DLX4Q92988 240 aaPredicted RBP9.68□□□□□ -0.86
TOP2B-203ENST00000424225 LINC00527Q9UJ94 153 aa9.68□□□□□ -0.86
TOP2B-203ENST00000424225 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
TOP2B-203ENST00000424225 ATP6V0E2Q8NHE4 81 aa9.68□□□□□ -0.86
TOP2B-203ENST00000424225 SONP18583 2426 aaKnown RBP9.68□□□□□ -0.86
TOP2B-203ENST00000424225 U3KQE9 123 aa9.68□□□□□ -0.86
TOP2B-203ENST00000424225 A0A1W2PPR1 153 aa9.67□□□□□ -0.86
TOP2B-203ENST00000424225 SPANXN1Q5VSR9 72 aa9.67□□□□□ -0.86
TOP2B-203ENST00000424225 SOCS3O14543 225 aa9.66□□□□□ -0.86
TOP2B-203ENST00000424225 VMO1Q7Z5L0 202 aa9.66□□□□□ -0.86
TOP2B-203ENST00000424225 TEN1Q86WV5 123 aa9.66□□□□□ -0.86
TOP2B-203ENST00000424225 EBI3Q14213 229 aa9.66□□□□□ -0.86
TOP2B-203ENST00000424225 FAM19A4Q96LR4 140 aa9.66□□□□□ -0.86
TOP2B-203ENST00000424225 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
TOP2B-203ENST00000424225 RAX2Q96IS3 184 aa9.66□□□□□ -0.86
TOP2B-203ENST00000424225 CCDC179H3BU77 68 aa9.65□□□□□ -0.87
TOP2B-203ENST00000424225 FBN2P35556 2912 aa9.64□□□□□ -0.87
TOP2B-203ENST00000424225 ODF3Q96PU9 254 aa9.64□□□□□ -0.87
TOP2B-203ENST00000424225 KLK9Q2XQG4 91 aa9.64□□□□□ -0.87
TOP2B-203ENST00000424225 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
TOP2B-203ENST00000424225 SLC25A29Q8N8R3 303 aa9.64□□□□□ -0.87
TOP2B-203ENST00000424225 SLC50A1Q9BRV3 221 aa9.64□□□□□ -0.87
TOP2B-203ENST00000424225 Q9UF83 564 aa9.64□□□□□ -0.87
TOP2B-203ENST00000424225 KLK9Q9UKQ9 250 aa9.64□□□□□ -0.87
TOP2B-203ENST00000424225 SORL1Q92673 2214 aa9.63□□□□□ -0.87
TOP2B-203ENST00000424225 TMEM263Q8WUH6 116 aaKnown RBP9.63□□□□□ -0.87
TOP2B-203ENST00000424225 ARL3P36405 182 aa9.63□□□□□ -0.87
TOP2B-203ENST00000424225 TMEM190Q8WZ59 177 aa9.63□□□□□ -0.87
TOP2B-203ENST00000424225 TP53TG1Q9Y2A0 90 aa9.63□□□□□ -0.87
TOP2B-203ENST00000424225 TRBV20-1A0A075B6N2 111 aa9.62□□□□□ -0.87
TOP2B-203ENST00000424225 TEX49A0A1B0GTD5 131 aa9.62□□□□□ -0.87
TOP2B-203ENST00000424225 PRTN3P24158 256 aa9.62□□□□□ -0.87
TOP2B-203ENST00000424225 P0DMU3 169 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms