RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 LYRM7Q5U5X0 104 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 Q6ZS46 218 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 IGHV3-38A0A0C4DH36 116 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 SPRY2O43597 315 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 ESM1Q9NQ30 184 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 RNASE1P07998 156 aaKnown RBP7.48□□□□□ -1.21
CMSS1-201ENST00000421999 SPATA45Q537H7 98 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 POLR3KQ9Y2Y1 108 aaPredicted RBP7.48□□□□□ -1.21
CMSS1-201ENST00000421999 PAX2Q02962 417 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 Q8N6K4 173 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 GNRH2O43555 120 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 SNAI2O43623 268 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 A6NJY4 79 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 NIT1Q86X76 327 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 ZC2HC1AQ96GY0 325 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 U3KQE9 123 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 IGKV1D-37A0A075B6S9 117 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 LAGE3Q14657 143 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 SLC25A34Q6PIV7 304 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 DEFB125Q8N687 156 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 CCDC140Q96MF4 163 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 FLNCQ14315 2725 aa7.47□□□□□ -1.21
CMSS1-201ENST00000421999 HINT1P49773 126 aaPredicted RBP7.46□□□□□ -1.21
CMSS1-201ENST00000421999 IFI27L1Q96BM0 104 aa7.46□□□□□ -1.21
CMSS1-201ENST00000421999 SPXQ9BT56 116 aa7.46□□□□□ -1.21
CMSS1-201ENST00000421999 LOC107984156A0A0G2JMH3 177 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 SPART-AS1P0CW21 52 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 IGLL1P15814 213 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 ARL17AQ8IVW1 177 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 ZNF492Q9P255 531 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 TRBV24-1A0A075B6N3 115 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 TRAV25A0A0B4J276 109 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 CXCL1P09341 107 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 COX6CP09669 75 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 CKS1BP61024 79 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 TRPT1Q86TN4 253 aaKnown RBP7.46□□□□□ -1.22
CMSS1-201ENST00000421999 TMEM256Q8N2U0 113 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 MRPL53Q96EL3 112 aaKnown RBP7.46□□□□□ -1.22
CMSS1-201ENST00000421999 SMIM12Q96EX1 92 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 C14orf144Q96I85 54 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 A6NDN8 102 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 PRSS46E5RG02 174 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 TEX43Q6ZNM6 134 aa7.46□□□□□ -1.22
CMSS1-201ENST00000421999 CRLF1O75462 422 aa7.45□□□□□ -1.22
CMSS1-201ENST00000421999 DNLZQ5SXM8 178 aa7.45□□□□□ -1.22
CMSS1-201ENST00000421999 MORN3Q6PF18 240 aaPredicted RBP7.45□□□□□ -1.22
CMSS1-201ENST00000421999 OR2K2Q8NGT1 345 aa7.45□□□□□ -1.22
CMSS1-201ENST00000421999 TMEM242Q9NWH2 141 aa7.45□□□□□ -1.22
CMSS1-201ENST00000421999 LYPD6BQ8NI32 183 aa7.45□□□□□ -1.22
CMSS1-201ENST00000421999 FAM167A-AS1Q96KT0 104 aa7.45□□□□□ -1.22
CMSS1-201ENST00000421999 TEP1Q99973 2627 aaKnown RBP7.45□□□□□ -1.22
CMSS1-201ENST00000421999 TRBV25-1A0A075B6N4 114 aa7.45□□□□□ -1.22
CMSS1-201ENST00000421999 COPS9Q8WXC6 57 aa7.45□□□□□ -1.22
CMSS1-201ENST00000421999 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 PRAC2D3DTV9 90 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 PLP1P60201 277 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 ZNF493Q6ZR52 646 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 ITPR3Q14573 2671 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 ADGRG4Q8IZF6 3080 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 M0R2P5 195 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 GAGE6Q13070 117 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 SLAQ13239 276 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 RASL11AQ6T310 242 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 LENEPQ9Y5L5 61 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 DSCAML1Q8TD84 2053 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 FLNAP21333 2647 aaKnown RBP7.44□□□□□ -1.22
CMSS1-201ENST00000421999 TNFRSF6BO95407 300 aa7.44□□□□□ -1.22
CMSS1-201ENST00000421999 WI2-2373I1.2A0A1W2PRP0 233 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 ZNF702PQ9H963 129 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 ATP5G1P05496 136 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 CHTOPQ9Y3Y2 248 aaKnown RBP7.43□□□□□ -1.22
CMSS1-201ENST00000421999 NEGR1Q7Z3B1 354 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 NDUFAF3Q9BU61 184 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 ZZEF1O43149 2961 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 LINC01549A6NIU2 74 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 J3QR89 54 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 EGR2P11161 476 aaPredicted RBP7.43□□□□□ -1.22
CMSS1-201ENST00000421999 SS18Q15532 418 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 ADAMTSL5Q6ZMM2 481 aa7.43□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BKO60814 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 DPM2O94777 84 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BJP06899 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BOP23527 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BBP33778 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 LINC00158P58513 81 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BDP58876 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BCP62807 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST2H2BEQ16778 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BHQ93079 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 ZNF48Q96MX3 618 aaPredicted RBP7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BNQ99877 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 HIST1H2BMQ99879 126 aa7.42□□□□□ -1.22
CMSS1-201ENST00000421999 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
CMSS1-201ENST00000421999 JOSD1Q15040 202 aaPredicted RBP7.42□□□□□ -1.22
CMSS1-201ENST00000421999 RHOHQ15669 191 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms