RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 IGHV6-1A0A0B4J1U7 121 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TRAV8-2A0A0B4J237 113 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 LOC107984640A0A0U1RRK4 108 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 C3orf85A0A1B0GTC6 90 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 TMEM262E9PQX1 116 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 IGFL2Q6UWQ7 119 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 NPBQ8NG41 125 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 CHCHD1Q96BP2 118 aaKnown RBP3.63□□□□□ -1.83
VPS13A-207ENST00000419472 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
VPS13A-207ENST00000419472 NBPF19A0A087WUL8 3843 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 ATRQ13535 2644 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 PINLYPA6NC86 204 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 IGLL5B9A064 214 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 C9JAW5 83 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 C9JCJ5 164 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 J3KT08 172 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 LEPROTL1O95214 131 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 RBP4P02753 201 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 OPRK1P41145 380 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 ATP5G3P48201 142 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 IBA57Q5T440 356 aaKnown RBP3.62□□□□□ -1.83
VPS13A-207ENST00000419472 KRTAP19-1Q8IUB9 90 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 RDH5Q92781 318 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 PROK2Q9HC23 129 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 HIGD1AQ9Y241 93 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 LHFPL6Q9Y693 200 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 CADP27708 2225 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 CACNA1DQ01668 2161 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 TRAV5A0A0B4J249 113 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 IGHV1-24A0A0C4DH33 117 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 SMIM27A0A1W2PRY6 76 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 P0C879 139 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 TAS2R45P59539 299 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 OR1L8Q8NGR8 309 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 PROCRQ9UNN8 238 aa3.62□□□□□ -1.83
VPS13A-207ENST00000419472 KLF13Q9Y2Y9 288 aaPredicted RBP3.62□□□□□ -1.83
VPS13A-207ENST00000419472 CPAMD8Q8IZJ3 1885 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 LRBAP50851 2863 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 COL6A6A6NMZ7 2263 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 A0A0J9YW62 118 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 C5orf63A6NC05 138 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 IZUMO1RA6ND01 250 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 PSMB2P49721 201 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 TNFAIP6P98066 277 aaPredicted RBP3.61□□□□□ -1.83
VPS13A-207ENST00000419472 ORMDL2Q53FV1 153 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 CFAP126Q5VTH2 177 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 ZNRF2Q8NHG8 242 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 PPDPFLQ8WWR9 84 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 CARD19Q96LW7 228 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 MRPL20Q9BYC9 149 aaKnown RBP3.61□□□□□ -1.83
VPS13A-207ENST00000419472 SPANXCQ9NY87 97 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 NOTCH1P46531 2555 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 IGLV2-8P01709 118 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 ZNF688P0C7X2 276 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 Q1RN00 199 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 LYPD2Q6UXB3 125 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 TMEM158Q8WZ71 300 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 DUX3Q96PT4 197 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 OSTCQ9NRP0 149 aa3.61□□□□□ -1.83
VPS13A-207ENST00000419472 YTHDF2Q9Y5A9 579 aaKnown RBP3.61□□□□□ -1.83
VPS13A-207ENST00000419472 NF1P21359 2839 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 EXPH5Q8NEV8 1989 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 NCKAP5O14513 1909 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 SPINK4O60575 86 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 SPRNQ5BIV9 151 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 POM121L12Q8N7R1 296 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 LINC00479Q96M42 142 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 HSD17B10Q99714 261 aaKnown RBP3.6□□□□□ -1.83
VPS13A-207ENST00000419472 ZNF331Q9NQX6 463 aaPredicted RBP3.6□□□□□ -1.83
VPS13A-207ENST00000419472 HIGD1BQ9P298 99 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 MTORP42345 2549 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 SPTBN1Q01082 2364 aaKnown RBP3.6□□□□□ -1.83
VPS13A-207ENST00000419472 LOC389332A0A1B0GUA5 103 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 PPYP01298 95 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 MGST1P10620 155 aaKnown RBP3.6□□□□□ -1.83
VPS13A-207ENST00000419472 ORM2P19652 201 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 MPV17P39210 176 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 ASIPP42127 132 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 CRIP2P52943 208 aaPredicted RBP3.6□□□□□ -1.83
VPS13A-207ENST00000419472 FXYD2P54710 66 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 DSCR4P56555 118 aaPredicted RBP3.6□□□□□ -1.83
VPS13A-207ENST00000419472 FXYD4P59646 89 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 SSX8Q7RTT4 187 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 FAM19A3Q7Z5A8 133 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 OR5AS1Q8N127 324 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 TYMSOSQ8TAI1 123 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 PRADC1Q9BSG0 188 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 IFI27L2Q9H2X8 130 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 PSENENQ9NZ42 101 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 PKDREJQ9NTG1 2253 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 F8P00451 2351 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 PCSK5Q92824 1860 aa3.6□□□□□ -1.83
VPS13A-207ENST00000419472 TEX50A0A1B0GTY4 177 aa3.59□□□□□ -1.83
VPS13A-207ENST00000419472 NPFFO15130 113 aa3.59□□□□□ -1.83
VPS13A-207ENST00000419472 SNCGO76070 127 aa3.59□□□□□ -1.83
VPS13A-207ENST00000419472 CRYGDP07320 174 aa3.59□□□□□ -1.83
VPS13A-207ENST00000419472 ZC2HC1BQ5TFG8 222 aa3.59□□□□□ -1.83
VPS13A-207ENST00000419472 GDF5OSQ5U4N7 250 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms