RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 Q86TA4 180 aa17.19■□□□□ 0.34
VEGFA-208ENST00000417285 WFDC10BQ8IUB3 73 aa17.19■□□□□ 0.34
VEGFA-208ENST00000417285 Q8N1X5 172 aa17.19■□□□□ 0.34
VEGFA-208ENST00000417285 C10orf126Q8N4M7 172 aa17.19■□□□□ 0.34
VEGFA-208ENST00000417285 KCNRGQ8N5I3 272 aa17.19■□□□□ 0.34
VEGFA-208ENST00000417285 NHLRC2Q8NBF2 726 aa17.19■□□□□ 0.34
VEGFA-208ENST00000417285 LOC100131303A0A0U1RQF7 123 aa17.18■□□□□ 0.34
VEGFA-208ENST00000417285 FABP5P3A8MUU1 101 aa17.18■□□□□ 0.34
VEGFA-208ENST00000417285 RNASE3P12724 160 aaKnown RBP17.18■□□□□ 0.34
VEGFA-208ENST00000417285 CDPF1Q6NVV7 123 aa17.18■□□□□ 0.34
VEGFA-208ENST00000417285 DNAH5Q8TE73 4624 aa17.17■□□□□ 0.34
VEGFA-208ENST00000417285 S100A4P26447 101 aaKnown RBP17.17■□□□□ 0.34
VEGFA-208ENST00000417285 ZNF506Q5JVG8 444 aa17.17■□□□□ 0.34
VEGFA-208ENST00000417285 DPPA3Q6W0C5 159 aa17.17■□□□□ 0.34
VEGFA-208ENST00000417285 PRADC1Q9BSG0 188 aa17.17■□□□□ 0.34
VEGFA-208ENST00000417285 TRBV6-4A0A1B0GX49 114 aa17.16■□□□□ 0.34
VEGFA-208ENST00000417285 PGPEP1LA6NFU8 196 aa17.16■□□□□ 0.34
VEGFA-208ENST00000417285 RHOHQ15669 191 aa17.16■□□□□ 0.34
VEGFA-208ENST00000417285 SLC25A29Q8N8R3 303 aa17.16■□□□□ 0.34
VEGFA-208ENST00000417285 TCEAL7Q9BRU2 100 aa17.16■□□□□ 0.34
VEGFA-208ENST00000417285 IGKV3D-20A0A0C4DH25 116 aa17.15■□□□□ 0.34
VEGFA-208ENST00000417285 HMSDA8MTL9 139 aa17.15■□□□□ 0.34
VEGFA-208ENST00000417285 CRYGDP07320 174 aa17.15■□□□□ 0.34
VEGFA-208ENST00000417285 ASIPP42127 132 aa17.15■□□□□ 0.34
VEGFA-208ENST00000417285 FHITP49789 147 aa17.15■□□□□ 0.34
VEGFA-208ENST00000417285 FMC1Q96HJ9 113 aa17.15■□□□□ 0.34
VEGFA-208ENST00000417285 ZFP30Q9Y2G7 519 aa17.15■□□□□ 0.34
VEGFA-208ENST00000417285 IGHV3-73A0A0B4J1V6 119 aa17.14■□□□□ 0.33
VEGFA-208ENST00000417285 UBE2G1P62253 170 aa17.14■□□□□ 0.33
VEGFA-208ENST00000417285 CST9LP1Q5W188 147 aa17.14■□□□□ 0.33
VEGFA-208ENST00000417285 SCRT2Q9NQ03 307 aa17.14■□□□□ 0.33
VEGFA-208ENST00000417285 A0A087WTM6 91 aa17.13■□□□□ 0.33
VEGFA-208ENST00000417285 IGHV3-38A0A0C4DH36 116 aa17.13■□□□□ 0.33
VEGFA-208ENST00000417285 A0A0D9SG52 128 aa17.13■□□□□ 0.33
VEGFA-208ENST00000417285 SEC11BP0C7V7 166 aa17.13■□□□□ 0.33
VEGFA-208ENST00000417285 MGST1P10620 155 aaKnown RBP17.13■□□□□ 0.33
VEGFA-208ENST00000417285 PIK3CD-AS1Q5SR53 167 aa17.13■□□□□ 0.33
VEGFA-208ENST00000417285 APOBP04114 4563 aaKnown RBP17.13■□□□□ 0.33
VEGFA-208ENST00000417285 TRAV8-6A0A0B4J262 113 aa17.12■□□□□ 0.33
VEGFA-208ENST00000417285 KANTRA0A1W2PQU2 76 aa17.12■□□□□ 0.33
VEGFA-208ENST00000417285 B4DEV8 164 aa17.12■□□□□ 0.33
VEGFA-208ENST00000417285 UMAD1C9J7I0 102 aa17.12■□□□□ 0.33
VEGFA-208ENST00000417285 COX8CQ7Z4L0 72 aa17.12■□□□□ 0.33
VEGFA-208ENST00000417285 ZNF471Q9BX82 626 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-208ENST00000417285 A8MWV9 139 aa17.11■□□□□ 0.33
VEGFA-208ENST00000417285 OR11H4Q8NGC9 324 aa17.11■□□□□ 0.33
VEGFA-208ENST00000417285 ZC2HC1AQ96GY0 325 aa17.11■□□□□ 0.33
VEGFA-208ENST00000417285 IL36BQ9NZH7 164 aa17.11■□□□□ 0.33
VEGFA-208ENST00000417285 TRBV6-1A0A0K0K1D8 114 aa17.1■□□□□ 0.33
VEGFA-208ENST00000417285 BCL2L11O43521 198 aa17.1■□□□□ 0.33
VEGFA-208ENST00000417285 LGALSLQ3ZCW2 172 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-208ENST00000417285 LINC01556Q5JQF7 62 aa17.1■□□□□ 0.33
VEGFA-208ENST00000417285 FAM162BQ5T6X4 162 aa17.1■□□□□ 0.33
VEGFA-208ENST00000417285 FAM213BQ8TBF2 198 aa17.1■□□□□ 0.33
VEGFA-208ENST00000417285 SFT2D1Q8WV19 159 aa17.1■□□□□ 0.33
VEGFA-208ENST00000417285 SH2D1AO60880 128 aa17.09■□□□□ 0.33
VEGFA-208ENST00000417285 CRIP1P50238 77 aa17.09■□□□□ 0.33
VEGFA-208ENST00000417285 EIF5AP63241 154 aaKnown RBP17.09■□□□□ 0.33
VEGFA-208ENST00000417285 ZFP2Q6ZN57 461 aa17.09■□□□□ 0.33
VEGFA-208ENST00000417285 PARLQ9H300 379 aa17.09■□□□□ 0.33
VEGFA-208ENST00000417285 KRBOX1C9JBD0 128 aa17.08■□□□□ 0.32
VEGFA-208ENST00000417285 PAGE4O60829 102 aa17.08■□□□□ 0.32
VEGFA-208ENST00000417285 AKR1C3P42330 323 aa17.08■□□□□ 0.32
VEGFA-208ENST00000417285 MBD3L1Q8WWY6 194 aa17.08■□□□□ 0.32
VEGFA-208ENST00000417285 H3BVH4 76 aa17.07■□□□□ 0.32
VEGFA-208ENST00000417285 M0R036 132 aa17.07■□□□□ 0.32
VEGFA-208ENST00000417285 LTAP01374 205 aa17.07■□□□□ 0.32
VEGFA-208ENST00000417285 OR10J3Q5JRS4 329 aa17.07■□□□□ 0.32
VEGFA-208ENST00000417285 DNLZQ5SXM8 178 aa17.07■□□□□ 0.32
VEGFA-208ENST00000417285 SYT8Q8NBV8 401 aa17.07■□□□□ 0.32
VEGFA-208ENST00000417285 IBA57-AS1B1ANH7 110 aa17.06■□□□□ 0.32
VEGFA-208ENST00000417285 ZNF674Q2M3X9 581 aa17.06■□□□□ 0.32
VEGFA-208ENST00000417285 LELP1Q5T871 98 aa17.06■□□□□ 0.32
VEGFA-208ENST00000417285 ATP6V0E2Q8NHE4 81 aa17.06■□□□□ 0.32
VEGFA-208ENST00000417285 GTSF1LQ9H1H1 148 aa17.06■□□□□ 0.32
VEGFA-208ENST00000417285 ARMS2P0C7Q2 107 aa17.05■□□□□ 0.32
VEGFA-208ENST00000417285 A0A1B0GV50 99 aa17.04■□□□□ 0.32
VEGFA-208ENST00000417285 PSCAO43653 123 aa17.04■□□□□ 0.32
VEGFA-208ENST00000417285 PFDN1O60925 122 aa17.04■□□□□ 0.32
VEGFA-208ENST00000417285 S100A9P06702 114 aaKnown RBP17.04■□□□□ 0.32
VEGFA-208ENST00000417285 GRIFINA4D1Z8 144 aa17.03■□□□□ 0.32
VEGFA-208ENST00000417285 H2AFB1P0C5Y9 115 aa17.03■□□□□ 0.32
VEGFA-208ENST00000417285 LINC01559Q495D7 138 aa17.03■□□□□ 0.32
VEGFA-208ENST00000417285 DMRTA1Q5VZB9 504 aa17.03■□□□□ 0.32
VEGFA-208ENST00000417285 PHLDA3Q9Y5J5 127 aa17.03■□□□□ 0.32
VEGFA-208ENST00000417285 RHODO00212 210 aa17.02■□□□□ 0.32
VEGFA-208ENST00000417285 TPT1P13693 172 aaKnown RBP17.02■□□□□ 0.32
VEGFA-208ENST00000417285 FUSP35637 526 aaKnown RBP eCLIP17.02■□□□□ 0.323e-8■□□□□ 10.5
VEGFA-208ENST00000417285 Q6ZSN1 163 aa17.02■□□□□ 0.32
VEGFA-208ENST00000417285 TMUB2Q71RG4 321 aa17.02■□□□□ 0.32
VEGFA-208ENST00000417285 JPT2Q9H910 190 aa17.02■□□□□ 0.32
VEGFA-208ENST00000417285 TMSB15BA0A087X1C1 80 aa17.01■□□□□ 0.31
VEGFA-208ENST00000417285 UFSP1Q6NVU6 142 aa17.01■□□□□ 0.31
VEGFA-208ENST00000417285 GAGE12JA6NER3 117 aa17■□□□□ 0.31
VEGFA-208ENST00000417285 GAGE1Q13065 139 aa17■□□□□ 0.31
VEGFA-208ENST00000417285 GAGE4Q13068 117 aa17■□□□□ 0.31
VEGFA-208ENST00000417285 GAGE5Q13069 117 aa17■□□□□ 0.31
VEGFA-208ENST00000417285 GAGE13Q4V321 117 aa17■□□□□ 0.31
VEGFA-208ENST00000417285 SAMD10Q9BYL1 202 aa17■□□□□ 0.31
VEGFA-208ENST00000417285 SCO2A0A1W2PP80 73 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms