RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ASIPP42127 132 aa10.68□□□□□ -0.7
ITGB1-204ENST00000417122 COX8CQ7Z4L0 72 aa10.68□□□□□ -0.7
ITGB1-204ENST00000417122 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
ITGB1-204ENST00000417122 ZC2HC1AQ96GY0 325 aa10.68□□□□□ -0.7
ITGB1-204ENST00000417122 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
ITGB1-204ENST00000417122 PKHD1P08F94 4074 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 A0A1B0GV50 99 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 B4DEV8 164 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 TPT1P13693 172 aaKnown RBP10.67□□□□□ -0.7
ITGB1-204ENST00000417122 AKR1C3P42330 323 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 CRIP1P50238 77 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 LINC00315P59091 139 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 SH2D6Q7Z4S9 175 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 NHLRC2Q8NBF2 726 aa10.67□□□□□ -0.7
ITGB1-204ENST00000417122 DNAH11Q96DT5 4516 aa10.66□□□□□ -0.7
ITGB1-204ENST00000417122 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
ITGB1-204ENST00000417122 SH2D1AO60880 128 aa10.66□□□□□ -0.7
ITGB1-204ENST00000417122 LTAP01374 205 aa10.66□□□□□ -0.7
ITGB1-204ENST00000417122 H2AFB1P0C5Y9 115 aa10.66□□□□□ -0.7
ITGB1-204ENST00000417122 PRADC1Q9BSG0 188 aa10.66□□□□□ -0.7
ITGB1-204ENST00000417122 LY96Q9Y6Y9 160 aa10.66□□□□□ -0.7
ITGB1-204ENST00000417122 TRBV6-4A0A1B0GX49 114 aa10.65□□□□□ -0.7
ITGB1-204ENST00000417122 KRBOX1C9JBD0 128 aa10.65□□□□□ -0.7
ITGB1-204ENST00000417122 M0R036 132 aa10.65□□□□□ -0.7
ITGB1-204ENST00000417122 RHOHQ15669 191 aa10.65□□□□□ -0.7
ITGB1-204ENST00000417122 PIK3CD-AS1Q5SR53 167 aa10.65□□□□□ -0.7
ITGB1-204ENST00000417122 FAM162BQ5T6X4 162 aa10.65□□□□□ -0.7
ITGB1-204ENST00000417122 WFDC10BQ8IUB3 73 aa10.65□□□□□ -0.7
ITGB1-204ENST00000417122 IL36BQ9NZH7 164 aa10.65□□□□□ -0.7
ITGB1-204ENST00000417122 TRAV9-2A0A087WT02 112 aa10.64□□□□□ -0.71
ITGB1-204ENST00000417122 A8MWV9 139 aa10.64□□□□□ -0.71
ITGB1-204ENST00000417122 H3BVH4 76 aa10.64□□□□□ -0.71
ITGB1-204ENST00000417122 MGST1P10620 155 aaKnown RBP10.64□□□□□ -0.71
ITGB1-204ENST00000417122 ZNF674Q2M3X9 581 aa10.64□□□□□ -0.71
ITGB1-204ENST00000417122 LGALSLQ3ZCW2 172 aaPredicted RBP10.64□□□□□ -0.71
ITGB1-204ENST00000417122 DNLZQ5SXM8 178 aa10.64□□□□□ -0.71
ITGB1-204ENST00000417122 PARLQ9H300 379 aa10.64□□□□□ -0.71
ITGB1-204ENST00000417122 SCO2A0A1W2PP80 73 aa10.63□□□□□ -0.71
ITGB1-204ENST00000417122 GRIFINA4D1Z8 144 aa10.63□□□□□ -0.71
ITGB1-204ENST00000417122 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
ITGB1-204ENST00000417122 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
ITGB1-204ENST00000417122 ARMS2P0C7Q2 107 aa10.63□□□□□ -0.71
ITGB1-204ENST00000417122 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-204ENST00000417122 TCTE3Q8IZS6 198 aa10.63□□□□□ -0.71
ITGB1-204ENST00000417122 K7EP13 123 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 EVI2AP22794 236 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 TIRAPP58753 221 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 LINC01559Q495D7 138 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 ZFP2Q6ZN57 461 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 SYT8Q8NBV8 401 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 TNFRSF18Q9Y5U5 241 aa10.62□□□□□ -0.71
ITGB1-204ENST00000417122 TMSB15BA0A087X1C1 80 aa10.61□□□□□ -0.71
ITGB1-204ENST00000417122 EIF5AL1Q6IS14 154 aaKnown RBP10.61□□□□□ -0.71
ITGB1-204ENST00000417122 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
ITGB1-204ENST00000417122 JPT2Q9H910 190 aa10.61□□□□□ -0.71
ITGB1-204ENST00000417122 RAB5CP51148 216 aa10.6□□□□□ -0.71
ITGB1-204ENST00000417122 Q6ZSN1 163 aa10.6□□□□□ -0.71
ITGB1-204ENST00000417122 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
ITGB1-204ENST00000417122 PHLDA3Q9Y5J5 127 aa10.6□□□□□ -0.71
ITGB1-204ENST00000417122 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 CRYGDP07320 174 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 CCL20P78556 96 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 UFSP1Q6NVU6 142 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 Q6ZNX1 250 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 BAGE2Q86Y30 109 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 MLST8Q9BVC4 326 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 SAMD10Q9BYL1 202 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 SCRT2Q9NQ03 307 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 MANBALQ9NQG1 85 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 MSRB1Q9NZV6 116 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 GNG13Q9P2W3 67 aa10.59□□□□□ -0.71
ITGB1-204ENST00000417122 TRAV1-1A0A0B4J248 108 aa10.58□□□□□ -0.72
ITGB1-204ENST00000417122 IGHV3-38A0A0C4DH36 116 aa10.58□□□□□ -0.72
ITGB1-204ENST00000417122 TEX46H3BTG2 121 aa10.58□□□□□ -0.72
ITGB1-204ENST00000417122 C1QBP02746 253 aa10.58□□□□□ -0.72
ITGB1-204ENST00000417122 KRTAP10-2P60368 255 aa10.58□□□□□ -0.72
ITGB1-204ENST00000417122 OR10J3Q5JRS4 329 aa10.58□□□□□ -0.72
ITGB1-204ENST00000417122 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
ITGB1-204ENST00000417122 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
ITGB1-204ENST00000417122 GAGE12JA6NER3 117 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 M0R381 172 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 RHODO00212 210 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 SULT1A2P50226 295 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 GAGE1Q13065 139 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 GAGE4Q13068 117 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 GAGE5Q13069 117 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 GAGE13Q4V321 117 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 LELP1Q5T871 98 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 FAM74A4Q5TZK3 123 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 SFRP2Q96HF1 295 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
ITGB1-204ENST00000417122 RPL35P42766 123 aaKnown RBP10.56□□□□□ -0.72
ITGB1-204ENST00000417122 RPL19P84098 196 aaKnown RBP10.56□□□□□ -0.72
ITGB1-204ENST00000417122 LINC01556Q5JQF7 62 aa10.56□□□□□ -0.72
ITGB1-204ENST00000417122 PRR27Q6MZM9 219 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 272.4 ms