RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-208	ENST00000415548	C9orf85	Q96MD7	179 aa		5.78	□□□□□ -1.48
CCT3-208	ENST00000415548	UPK3B	Q9BT76	320 aa		5.78	□□□□□ -1.48
CCT3-208	ENST00000415548		Q9H8V8	135 aa		5.78	□□□□□ -1.48
CCT3-208	ENST00000415548	ZFP30	Q9Y2G7	519 aa		5.78	□□□□□ -1.48
CCT3-208	ENST00000415548		A0A1B0GVY2	172 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	SCO2	A0A1W2PP80	73 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	PGPEP1L	A6NFU8	196 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548		B4DEV8	164 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548		K7EQD1	137 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548		M0R036	132 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	RS1	O15537	224 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	SH2D1A	O60880	128 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	LTA	P01374	205 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	ORM1	P02763	201 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	RNASE3	P12724	160 aa	Known RBP	5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	GYPE	P15421	78 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	MRPL23	Q16540	153 aa	Known RBP	5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	SOHLH1	Q5JUK2	328 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	ZNF506	Q5JVG8	444 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	FAM162B	Q5T6X4	162 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	CFAP126	Q5VTH2	177 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	EIF5AL1	Q6IS14	154 aa	Known RBP	5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	COX8C	Q7Z4L0	72 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	NHLRC2	Q8NBF2	726 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	KRTAP1-5	Q9BYS1	174 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	DNAH5	Q8TE73	4624 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	LRP1B	Q9NZR2	4599 aa		5.77	□□□□□ -1.49
CCT3-208	ENST00000415548	IGHV3-73	A0A0B4J1V6	119 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	LOC100131303	A0A0U1RQF7	123 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	GRIFIN	A4D1Z8	144 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	KRBOX1	C9JBD0	128 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	GATA1	P15976	413 aa	Predicted RBP	5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	S100A4	P26447	101 aa	Known RBP	5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	SRI	P30626	198 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	ASIP	P42127	132 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	SULT1A2	P50226	295 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	RAB5C	P51148	216 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	ZNF674	Q2M3X9	581 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	LYPD5	Q6UWN5	251 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	SLC51B	Q86UW2	128 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	C6orf223	Q8N319	242 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	C9orf62	Q8N4C0	152 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	PCNP	Q8WW12	178 aa	Known RBP	5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	PTH2	Q96A98	100 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	GNG13	Q9P2W3	67 aa		5.76	□□□□□ -1.49
CCT3-208	ENST00000415548	TMSB15B	A0A087X1C1	80 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	TRAV1-1	A0A0B4J248	108 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548		H3BVH4	76 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	NXPH4	O95158	308 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	S100A9	P06702	114 aa	Known RBP	5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	TTC32	Q5I0X7	151 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	NEGR1	Q7Z3B1	354 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	SLC25A29	Q8N8R3	303 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	MANBAL	Q9NQG1	85 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	IL36B	Q9NZH7	164 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548	RYR1	P21817	5038 aa		5.75	□□□□□ -1.49
CCT3-208	ENST00000415548		A0A1B0GVG6	124 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	TEX46	H3BTG2	121 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	SIVA1	O15304	175 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	ARMS2	P0C7Q2	107 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	RPL35	P42766	123 aa	Known RBP	5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	TNP2	Q05952	138 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	DNLZ	Q5SXM8	178 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	ZNF575	Q86XF7	245 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	BAGE2	Q86Y30	109 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	TXNDC17	Q9BRA2	123 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	JPT2	Q9H910	190 aa		5.74	□□□□□ -1.49
CCT3-208	ENST00000415548	TRBV6-4	A0A1B0GX49	114 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548		A0A1W2PPQ1	181 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548		A8MWV9	139 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	CIDEA	O60543	219 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	RPL19	P84098	196 aa	Known RBP	5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	PRR27	Q6MZM9	219 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548		Q6ZSN1	163 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	WFDC10B	Q8IUB3	73 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	C11orf52	Q96A22	123 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	DERL1	Q9BUN8	251 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	MLST8	Q9BVC4	326 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	SAMD10	Q9BYL1	202 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	PARL	Q9H300	379 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548	SCRT2	Q9NQ03	307 aa		5.73	□□□□□ -1.49
CCT3-208	ENST00000415548		M0R381	172 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	IFNA1	P01562	189 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	RHOH	Q15669	191 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	CENPW	Q5EE01	88 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	PIK3CD-AS1	Q5SR53	167 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	ZFP2	Q6ZN57	461 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	SYT8	Q8NBV8	401 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	PRADC1	Q9BSG0	188 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	PHLDA3	Q9Y5J5	127 aa		5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	APOB	P04114	4563 aa	Known RBP	5.72	□□□□□ -1.49
CCT3-208	ENST00000415548	RAB19	A4D1S5	217 aa		5.71	□□□□□ -1.5
CCT3-208	ENST00000415548	IGLV2-8	P01709	118 aa		5.71	□□□□□ -1.5
CCT3-208	ENST00000415548	BCL2	P10415	239 aa		5.71	□□□□□ -1.5
CCT3-208	ENST00000415548	MGST1	P10620	155 aa	Known RBP	5.71	□□□□□ -1.5
CCT3-208	ENST00000415548	NKX2-5	P52952	324 aa	Predicted RBP	5.71	□□□□□ -1.5
CCT3-208	ENST00000415548	TIRAP	P58753	221 aa		5.71	□□□□□ -1.5
CCT3-208	ENST00000415548	LINC00315	P59091	139 aa		5.71	□□□□□ -1.5
CCT3-208	ENST00000415548	MEF2B	Q02080	365 aa	Predicted RBP	5.71	□□□□□ -1.5
CCT3-208	ENST00000415548	UFSP1	Q6NVU6	142 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms