RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SLC25A5P05141 298 aaKnown RBP2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 ZNF137PP52743 207 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 NDPQ00604 133 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 DAZ2Q13117 558 aaKnown RBP2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 C12orf74Q32Q52 190 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 Q5XG85 94 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 GUSBP11Q6P575 273 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 HRCT1Q6UXD1 115 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 Q6ZS52 159 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 ZNF833PQ6ZTB9 187 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 DAZ4Q86SG3 579 aaKnown RBP2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 ORMDL3Q8N138 153 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 TTC9CQ8N5M4 171 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 LINC00337Q8N6G1 96 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 IFI27L1Q96BM0 104 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 CARD19Q96LW7 228 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 RNF5Q99942 180 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 NXT2Q9NPJ8 142 aaKnown RBP2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 DAZ1Q9NQZ3 744 aaKnown RBP2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 DAZ3Q9NR90 486 aaKnown RBP2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 MRPL16Q9NX20 251 aaKnown RBP2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 ANAPC11Q9NYG5 84 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 XCL2Q9UBD3 114 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 RPUSD1Q9UJJ7 312 aaKnown RBP2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 HIGD1AQ9Y241 93 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 UNC13CQ8NB66 2214 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 PTPRBP23467 1997 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 CEP350Q5VT06 3117 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGKV1D-17A0A075B6S4 117 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGKV1D-37A0A075B6S9 117 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 TRAV3A0A0B4J244 114 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 H3BMG7 143 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 NDUFS5O43920 106 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 SAA2P0DJI9 122 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 COL8A2P25067 703 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 CXCL12P48061 93 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 KLRD1Q13241 179 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 C17orf58Q2M2W7 97 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 VMA21Q3ZAQ7 101 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 RPL39P5Q59GN2 51 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 SPINK9Q5DT21 86 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 FAM104BQ5XKR9 115 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 PATE2Q6UY27 113 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 Q6ZR03 302 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 Q6ZRU5 148 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 LINC00305Q7Z4B0 112 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 Q86TA4 180 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 PPP1R27Q86WC6 154 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 KRTAP11-1Q8IUC1 163 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 OR10J6PQ8NGY7 276 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 ZNF418Q8TF45 676 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 LINC01600Q96MT4 127 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 CNFNQ9BYD5 112 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 TTTY12Q9BZ98 90 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 Q9H3A6 140 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 SPANXCQ9NY87 97 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 DPM3Q9P2X0 92 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 CYSLTR1Q9Y271 337 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 LINC00312Q9Y6C7 94 aa2.59□□□□□ -1.99
HMGB3P23-201ENST00000414981 PRRC2AP48634 2157 aaKnown RBP2.59□□□□□ -2
HMGB3P23-201ENST00000414981 NCKAP5O14513 1909 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 ARHGAP21Q5T5U3 1957 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 IGLV3-9A0A075B6K5 115 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 TRBV20-1A0A075B6N2 111 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 A0A096LNJ9 63 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 TRGV5A0A0B4J1U4 118 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 IGHV3-43A0A0B4J1X8 118 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 TRAV12-1A0A0B4J245 112 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 IGHV3OR16-9A0A0B4J2B5 98 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 WI2-2373I1.2A0A1W2PRP0 233 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 IGKCP01834 107 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 SAA1P0DJI8 122 aaPredicted RBP2.58□□□□□ -2
HMGB3P23-201ENST00000414981 IGHV3-43DP0DP04 118 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 IGHV1-2P23083 117 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 PLNP26678 52 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 FCER1GP30273 86 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 FAM222AQ5U5X8 452 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 C2orf66Q6UXQ4 117 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 UNQ9165/PRO28630Q6UXU0 137 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 CEND1Q8N111 149 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 CT55Q8WUE5 264 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 PRELID3AQ96N28 172 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 INSIG2Q9Y5U4 225 aa2.58□□□□□ -2
HMGB3P23-201ENST00000414981 ZNF407Q9C0G0 2248 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 TRBV19A0A075B6N1 114 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 TRBV25-1A0A075B6N4 114 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 TRAV5A0A0B4J249 113 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 LOC107984640A0A0U1RRK4 108 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 RBAKDNA6NC62 111 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 PINLYPA6NC86 204 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 EPOPA6NHQ4 379 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 DEFB108AA8MXU0 73 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 IGLL5B9A064 214 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 DPM2O94777 84 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 NDUFC2O95298 119 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 RBP4P02753 201 aa2.57□□□□□ -2
HMGB3P23-201ENST00000414981 GIG44P09565 113 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms