RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 GNG4P50150 75 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 DNLZQ5SXM8 178 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 SMIM12Q96EX1 92 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 VSIG2Q96IQ7 327 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 LYSTQ99698 3801 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 PHLDA3Q9Y5J5 127 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 DNAH1Q9P2D7 4330 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 A0A096LPF7 62 aa10.24□□□□□ -0.77
CHD1-202ENST00000414220 H3BVH4 76 aa10.24□□□□□ -0.77
CHD1-202ENST00000414220 ARMS2P0C7Q2 107 aa10.24□□□□□ -0.77
CHD1-202ENST00000414220 SRIP30626 198 aa10.24□□□□□ -0.77
CHD1-202ENST00000414220 PRR27Q6MZM9 219 aa10.24□□□□□ -0.77
CHD1-202ENST00000414220 SH2D6Q7Z4S9 175 aa10.24□□□□□ -0.77
CHD1-202ENST00000414220 MLST8Q9BVC4 326 aa10.24□□□□□ -0.77
CHD1-202ENST00000414220 IGLV2-18A0A075B6J9 118 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 TMSB15BA0A087X1C1 80 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 PGPEP1LA6NFU8 196 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 RS1O15537 224 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 MGST1P10620 155 aaKnown RBP10.23□□□□□ -0.77
CHD1-202ENST00000414220 CENPWQ5EE01 88 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 SOHLH1Q5JUK2 328 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 ZNF506Q5JVG8 444 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 NEGR1Q7Z3B1 354 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 PRADC1Q9BSG0 188 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 BOLA1Q9Y3E2 137 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 LINC00588Q9Y4M8 146 aa10.23□□□□□ -0.77
CHD1-202ENST00000414220 RBFOX3A6NFN3 312 aa10.22□□□□□ -0.77
CHD1-202ENST00000414220 M0R2N4 97 aa10.22□□□□□ -0.77
CHD1-202ENST00000414220 CXCL1P09341 107 aa10.22□□□□□ -0.77
CHD1-202ENST00000414220 MED14OSP0DP75 135 aa10.22□□□□□ -0.77
CHD1-202ENST00000414220 CFAP126Q5VTH2 177 aa10.22□□□□□ -0.77
CHD1-202ENST00000414220 XKRY2A2RUG3 117 aa10.21□□□□□ -0.77
CHD1-202ENST00000414220 GYPEP15421 78 aa10.21□□□□□ -0.77
CHD1-202ENST00000414220 RPS20P60866 119 aaKnown RBP10.21□□□□□ -0.77
CHD1-202ENST00000414220 RHOHQ15669 191 aa10.21□□□□□ -0.77
CHD1-202ENST00000414220 ESRGQ1W209 222 aa10.21□□□□□ -0.77
CHD1-202ENST00000414220 ZFP2Q6ZN57 461 aa10.21□□□□□ -0.77
CHD1-202ENST00000414220 ZFP82Q8N141 532 aa10.21□□□□□ -0.77
CHD1-202ENST00000414220 DERL1Q9BUN8 251 aa10.21□□□□□ -0.77
CHD1-202ENST00000414220 Q9H8V8 135 aa10.21□□□□□ -0.77
CHD1-202ENST00000414220 MRPS16Q9Y3D3 137 aaKnown RBP10.21□□□□□ -0.77
CHD1-202ENST00000414220 TRBV6-4A0A1B0GX49 114 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 RAB19A4D1S5 217 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 TMEM250H0YL14 139 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 K7EQD1 137 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 RHODO00212 210 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
CHD1-202ENST00000414220 TTC32Q5I0X7 151 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 ZNRF2Q8NHG8 242 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 LYPD6BQ8NI32 183 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 MUC4Q99102 2169 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 UPK3BQ9BT76 320 aa10.2□□□□□ -0.78
CHD1-202ENST00000414220 EIF5A2Q9GZV4 153 aaKnown RBP10.2□□□□□ -0.78
CHD1-202ENST00000414220 IGHV3-73A0A0B4J1V6 119 aa10.19□□□□□ -0.78
CHD1-202ENST00000414220 LINC00336Q6ZUF6 198 aa10.19□□□□□ -0.78
CHD1-202ENST00000414220 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 M0R381 172 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 P01737 135 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 SPANXN1Q5VSR9 72 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 DMRTA1Q5VZB9 504 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 SLC25A29Q8N8R3 303 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 PARLQ9H300 379 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 SCRT2Q9NQ03 307 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 HYDINQ4G0P3 5121 aa10.18□□□□□ -0.78
CHD1-202ENST00000414220 NDUFS6O75380 124 aaKnown RBP10.17□□□□□ -0.78
CHD1-202ENST00000414220 C1orf134Q5TEV5 83 aa10.17□□□□□ -0.78
CHD1-202ENST00000414220 LYPD5Q6UWN5 251 aa10.17□□□□□ -0.78
CHD1-202ENST00000414220 OR2D3Q8NGH3 330 aa10.17□□□□□ -0.78
CHD1-202ENST00000414220 SFRP2Q96HF1 295 aa10.17□□□□□ -0.78
CHD1-202ENST00000414220 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 A0A1W2PPQ1 181 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 SIVA1O15304 175 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 OR5AL1P0C617 328 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 CEBPGP53567 150 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 RPL19P84098 196 aaKnown RBP10.16□□□□□ -0.78
CHD1-202ENST00000414220 TOR2AQ5JU69 321 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 TEX261Q6UWH6 196 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 Q6ZR54 194 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 VPS13DQ5THJ4 4388 aa10.16□□□□□ -0.78
CHD1-202ENST00000414220 IGLV2-8P01709 118 aa10.15□□□□□ -0.78
CHD1-202ENST00000414220 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
CHD1-202ENST00000414220 FAM210AQ96ND0 272 aa10.15□□□□□ -0.78
CHD1-202ENST00000414220 SSBP4Q9BWG4 385 aaPredicted RBP10.15□□□□□ -0.78
CHD1-202ENST00000414220 SNAI2O43623 268 aa10.14□□□□□ -0.79
CHD1-202ENST00000414220 NXPH4O95158 308 aa10.14□□□□□ -0.79
CHD1-202ENST00000414220 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 C19orf71A6NCJ1 209 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 F2Z2F3 143 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 BTF3P20290 206 aaKnown RBP10.13□□□□□ -0.79
CHD1-202ENST00000414220 TIRAPP58753 221 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 CACNG7P62955 275 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 FER1L6-AS1Q8NA97 138 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 OCC1Q8TAD7 63 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 JPT2Q9H910 190 aa10.13□□□□□ -0.79
CHD1-202ENST00000414220 TRBV20OR9-2A0A075B6H5 130 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 A0A087WWL8 130 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 LOC100131303A0A0U1RQF7 123 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms