RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SYT8Q8NBV8 401 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 LEAP2Q969E1 77 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 AKAP9Q99996 3911 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 MALRD1Q5VYJ5 2156 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 CCDC168Q8NDH2 2452 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 PGPA6NDG6 321 aa7.21□□□□□ -1.26
SNHG3-201ENST00000413987 RNASE2P10153 161 aaKnown RBP7.21□□□□□ -1.26
SNHG3-201ENST00000413987 CD24P25063 80 aa7.21□□□□□ -1.26
SNHG3-201ENST00000413987 ZNF138P52744 262 aa7.21□□□□□ -1.26
SNHG3-201ENST00000413987 ERHP84090 104 aaKnown RBP7.21□□□□□ -1.26
SNHG3-201ENST00000413987 CCL19Q99731 98 aa7.21□□□□□ -1.26
SNHG3-201ENST00000413987 NAA38Q9BRA0 125 aaKnown RBP7.21□□□□□ -1.26
SNHG3-201ENST00000413987 HIGD1BQ9P298 99 aa7.21□□□□□ -1.26
SNHG3-201ENST00000413987 TIMM8BQ9Y5J9 83 aaPredicted RBP7.21□□□□□ -1.26
SNHG3-201ENST00000413987 A0A1B0GUT8 65 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 LINC01619G3V211 115 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 IGHV4-39P01824 125 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 MORN5Q5VZ52 161 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 EXOC3-AS1Q8N2X6 119 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 DSCAML1Q8TD84 2053 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 NCR2O95944 276 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 ATP5G1P05496 136 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 CCL3L1P16619 93 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 FAM19A4Q96LR4 140 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 MAP6D1Q9H9H5 199 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 ZNRD1Q9P1U0 126 aa7.2□□□□□ -1.26
SNHG3-201ENST00000413987 PDZD2O15018 2839 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 INS-IGF2F8WCM5 200 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 PFN2P35080 140 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 Q6AWC8 147 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 LINC00322Q6ZN03 302 aaPredicted RBP7.19□□□□□ -1.26
SNHG3-201ENST00000413987 OR8A1Q8NGG7 326 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 INSIG2Q9Y5U4 225 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 TRAV26-2A0A0B4J265 109 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 CIARTQ8N365 385 aaPredicted RBP7.19□□□□□ -1.26
SNHG3-201ENST00000413987 PRADC1Q9BSG0 188 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 CALYQ9NYX4 217 aa7.19□□□□□ -1.26
SNHG3-201ENST00000413987 WNK2Q9Y3S1 2297 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 TRBV6-1A0A0K0K1D8 114 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.18□□□□□ -1.26
SNHG3-201ENST00000413987 FSTL3O95633 263 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 TCRAP04437 139 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 NSUN5P1Q3KNT7 163 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 HRCT1Q6UXD1 115 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 PATE2Q6UY27 113 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 LINC00305Q7Z4B0 112 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 ZNF414Q96IQ9 312 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 BPESC1Q9GZL8 116 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 ABCA2Q9BZC7 2435 aa7.18□□□□□ -1.26
SNHG3-201ENST00000413987 HBDP02042 147 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 SAA2P0DJI9 122 aaPredicted RBP7.17□□□□□ -1.26
SNHG3-201ENST00000413987 NMUP48645 174 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 EFNA4P52798 201 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 CACNG7P62955 275 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 C17orf58Q2M2W7 97 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 IGFBPL1Q8WX77 278 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 SELENOKQ9Y6D0 94 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 NOTCH2Q04721 2471 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 TRAV8-2A0A0B4J237 113 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 LOC100131303A0A0U1RQF7 123 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 NDUFB3O43676 98 aa7.17□□□□□ -1.26
SNHG3-201ENST00000413987 C8orf87E5RJ46 101 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 E9PLD3 99 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 SMCPP49901 116 aaPredicted RBP7.16□□□□□ -1.26
SNHG3-201ENST00000413987 ZNF493Q6ZR52 646 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 C2orf48Q96LS8 159 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 NDUFA4L2Q9NRX3 87 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 TEX15Q9BXT5 2789 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 CUBNO60494 3623 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 ITPR3Q14573 2671 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 CDK2AP2O75956 126 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 CGB3P0DN86 165 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 CGB7P0DN87 165 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 IFI27P40305 119 aaPredicted RBP7.16□□□□□ -1.26
SNHG3-201ENST00000413987 Q86TA4 180 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 OSR1Q8TAX0 266 aaPredicted RBP7.16□□□□□ -1.26
SNHG3-201ENST00000413987 Q9H3A6 140 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 OTORQ9NRC9 128 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 U3KQK5 164 aa7.16□□□□□ -1.26
SNHG3-201ENST00000413987 TET2Q6N021 2002 aaPredicted RBP7.15□□□□□ -1.26
SNHG3-201ENST00000413987 A0A096LNJ9 63 aa7.15□□□□□ -1.26
SNHG3-201ENST00000413987 HLA-DRB4P13762 266 aa7.15□□□□□ -1.26
SNHG3-201ENST00000413987 TTC32Q5I0X7 151 aa7.15□□□□□ -1.26
SNHG3-201ENST00000413987 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
SNHG3-201ENST00000413987 HLA-DRB4X5D2U9 266 aa7.15□□□□□ -1.26
SNHG3-201ENST00000413987 FLNBO75369 2602 aaKnown RBP7.15□□□□□ -1.26
SNHG3-201ENST00000413987 IGHV4-30-2A0A087WSY4 118 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 A0A1B0GWB2 263 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 IGHG2P01859 326 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 ARMS2P0C7Q2 107 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 ZFP36P26651 326 aaKnown RBP7.15□□□□□ -1.27
SNHG3-201ENST00000413987 WFDC2Q14508 124 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 TTC9CQ8N5M4 171 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 MAPK1IP1LQ8NDC0 245 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 METTL26Q96S19 204 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.27
SNHG3-201ENST00000413987 JPT2Q9H910 190 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms