RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ADCYAP1P18509 176 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 HLA-DMBP28068 263 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 UBE2G2P60604 165 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 RANP62826 216 aaKnown RBP2.89□□□□□ -1.95
CLK1-203ENST00000409769 PSG9Q00887 426 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 MEF2BQ02080 365 aaPredicted RBP2.89□□□□□ -1.95
CLK1-203ENST00000409769 PEA15Q15121 130 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 KRTAP21-3Q3LHN1 58 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 C10orf91Q5T1B1 145 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 IQCF2Q8IXL9 164 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 SLC7A5P1Q8MH63 180 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 TMEM61Q8N0U2 210 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 EXOC3-AS1Q8N2X6 119 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 C3orf56Q8N813 242 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 C5orf17Q8NAS9 161 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 OR2K2Q8NGT1 345 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 RXFP4Q8TDU9 374 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 BLNKQ8WV28 456 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 TCEAL7Q9BRU2 100 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 NKX6-2Q9C056 277 aaPredicted RBP2.89□□□□□ -1.95
CLK1-203ENST00000409769 MS4A6AQ9H2W1 248 aa2.89□□□□□ -1.95
CLK1-203ENST00000409769 DNAH3Q8TD57 4116 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 TRBV6-1A0A0K0K1D8 114 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 SERTM2A0A1B0GWG4 89 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 TMEM218A2RU14 115 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 RBAKDNA6NC62 111 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 PGPA6NDG6 321 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 F6UZH7 168 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 M0R3E3 92 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 ISLRO14498 428 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 PDE6DO43924 150 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 TCRAP04437 139 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 SLC25A5P05141 298 aaKnown RBP2.88□□□□□ -1.95
CLK1-203ENST00000409769 INSL3P51460 131 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 GNG5P63218 68 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 PSG3Q16557 428 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 SAMD13Q5VXD3 122 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 FAM24BQ8N5W8 94 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 RNF182Q8N6D2 247 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 CYB561D1Q8N8Q1 229 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 DYNLRB2Q8TF09 96 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 HIST1H2BAQ96A08 127 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 DERL1Q9BUN8 251 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 SEC11CQ9BY50 192 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 EIF5A2Q9GZV4 153 aaKnown RBP2.88□□□□□ -1.95
CLK1-203ENST00000409769 EPDR1Q9UM22 224 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 PRELID1Q9Y255 219 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 CARHSP1Q9Y2V2 147 aaKnown RBP2.88□□□□□ -1.95
CLK1-203ENST00000409769 KLF12Q9Y4X4 402 aa2.88□□□□□ -1.95
CLK1-203ENST00000409769 VWFP04275 2813 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 TRBV20OR9-2A0A075B6H5 130 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 IGKV3-7A0A075B6H7 116 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 A8MTW9 85 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 ZNF705FA8MVS1 300 aaPredicted RBP2.87□□□□□ -1.95
CLK1-203ENST00000409769 C9JCJ5 164 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 PEX7O00628 323 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 IGLV2-8P01709 118 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 PRB2P02812 416 aaPredicted RBP2.87□□□□□ -1.95
CLK1-203ENST00000409769 SFTA3P0C7M3 94 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 AKR1C3P42330 323 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 RPL35P42766 123 aaKnown RBP2.87□□□□□ -1.95
CLK1-203ENST00000409769 TAS2R60P59551 318 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 TMEM183BQ1AE95 376 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 LCN12Q6JVE5 192 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 UFSP1Q6NVU6 142 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 C14orf178Q8N769 122 aaPredicted RBP2.87□□□□□ -1.95
CLK1-203ENST00000409769 TMEM75Q8N9X5 138 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 RPUSD4Q96CM3 377 aaKnown RBP2.87□□□□□ -1.95
CLK1-203ENST00000409769 FAM19A4Q96LR4 140 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 IGF2BP2-AS1Q96M15 143 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 LINC00052Q96N35 136 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 SLC35B3Q9H1N7 401 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 SAV1Q9H4B6 383 aaPredicted RBP2.87□□□□□ -1.95
CLK1-203ENST00000409769 TREM1Q9NP99 234 aa2.87□□□□□ -1.95
CLK1-203ENST00000409769 IGKV2-40A0A087WW87 121 aaPredicted RBP2.86□□□□□ -1.95
CLK1-203ENST00000409769 TRAV8-1A0A0A6YYK1 113 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 A0A0J9YX75 114 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 OR4C46A6NHA9 309 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 ZNF727A8MUV8 499 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 KRBOX1C9JBD0 128 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 F6UB75 175 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 DNASE2O00115 360 aaPredicted RBP2.86□□□□□ -1.95
CLK1-203ENST00000409769 LTAP01374 205 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 IGKV2D-40P01614 121 aaPredicted RBP2.86□□□□□ -1.95
CLK1-203ENST00000409769 S100A9P06702 114 aaKnown RBP2.86□□□□□ -1.95
CLK1-203ENST00000409769 ZNF688P0C7X2 276 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 PRB4P10163 310 aaPredicted RBP2.86□□□□□ -1.95
CLK1-203ENST00000409769 IGLL1P15814 213 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 CSN1S1P47710 185 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 TFPI2P48307 235 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 DEFB1P60022 68 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 SNRPD3P62318 126 aaKnown RBP2.86□□□□□ -1.95
CLK1-203ENST00000409769 PAFAH1B2P68402 229 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 EGFEM1PQ0D2K5 195 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 FAM74A3Q4VXF1 159 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 PSMG4Q5JS54 123 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 SOHLH1Q5JUK2 328 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 GDF5OSQ5U4N7 250 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 FOXI2Q6ZQN5 318 aa2.86□□□□□ -1.95
CLK1-203ENST00000409769 GOLT1AQ6ZVE7 132 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms