RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 A0A1W2PRE2 83 aa11.21□□□□□ -0.61
SCRN1-203ENST00000409570 TPT1P13693 172 aaKnown RBP11.21□□□□□ -0.61
SCRN1-203ENST00000409570 TMEM183BQ1AE95 376 aa11.21□□□□□ -0.61
SCRN1-203ENST00000409570 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
SCRN1-203ENST00000409570 TMEM183AQ8IXX5 376 aa11.21□□□□□ -0.61
SCRN1-203ENST00000409570 NKX6-2Q9C056 277 aaPredicted RBP11.21□□□□□ -0.61
SCRN1-203ENST00000409570 K7EQM0 130 aa11.2□□□□□ -0.62
SCRN1-203ENST00000409570 EIF3GO75821 320 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCRN1-203ENST00000409570 PPT1P50897 306 aa11.2□□□□□ -0.62
SCRN1-203ENST00000409570 EIF5AL1Q6IS14 154 aaKnown RBP11.2□□□□□ -0.62
SCRN1-203ENST00000409570 DPPA3Q6W0C5 159 aa11.2□□□□□ -0.62
SCRN1-203ENST00000409570 C5orf17Q8NAS9 161 aa11.2□□□□□ -0.62
SCRN1-203ENST00000409570 NHLRC2Q8NBF2 726 aa11.2□□□□□ -0.62
SCRN1-203ENST00000409570 OR4C5Q8NGB2 326 aa11.2□□□□□ -0.62
SCRN1-203ENST00000409570 STOML3Q8TAV4 291 aa11.2□□□□□ -0.62
SCRN1-203ENST00000409570 PKHD1L1Q86WI1 4243 aa11.2□□□□□ -0.62
SCRN1-203ENST00000409570 FBLL1A6NHQ2 334 aaKnown RBP11.19□□□□□ -0.62
SCRN1-203ENST00000409570 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
SCRN1-203ENST00000409570 ZNF726P1Q15940 193 aa11.19□□□□□ -0.62
SCRN1-203ENST00000409570 Q6AWC8 147 aa11.19□□□□□ -0.62
SCRN1-203ENST00000409570 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
SCRN1-203ENST00000409570 IGHV3-30P01768 117 aa11.18□□□□□ -0.62
SCRN1-203ENST00000409570 IGHV3-33P01772 117 aa11.18□□□□□ -0.62
SCRN1-203ENST00000409570 IGHV3-30-3P0DP02 117 aa11.18□□□□□ -0.62
SCRN1-203ENST00000409570 IGHV3-30-5P0DP03 117 aa11.18□□□□□ -0.62
SCRN1-203ENST00000409570 GATA1P15976 413 aaPredicted RBP11.18□□□□□ -0.62
SCRN1-203ENST00000409570 hCG_2014768A0A024R1R8 64 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 TRAV8-6A0A0B4J262 113 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 IGHV3-16A0A0C4DH30 117 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 MAP1LC3B2A6NCE7 125 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 LGALSLQ3ZCW2 172 aaPredicted RBP11.17□□□□□ -0.62
SCRN1-203ENST00000409570 OR10J3Q5JRS4 329 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 FAM159AQ6UWV7 190 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 MAP1LC3BQ9GZQ8 125 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 PLA2G2DQ9UNK4 145 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 ARL2-SNX15V9GYD0 113 aa11.17□□□□□ -0.62
SCRN1-203ENST00000409570 M0R2P5 195 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 OXTP01178 125 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 TCRAP04437 139 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 RAB5CP51148 216 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
SCRN1-203ENST00000409570 GOLT1AQ6ZVE7 132 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 SCXQ7RTU7 201 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 TCEAL7Q9BRU2 100 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 RPH3ALQ9UNE2 315 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
SCRN1-203ENST00000409570 GNRH2O43555 120 aa11.15□□□□□ -0.62
SCRN1-203ENST00000409570 PFN1P07737 140 aaKnown RBP11.15□□□□□ -0.62
SCRN1-203ENST00000409570 LAGE3Q14657 143 aa11.15□□□□□ -0.62
SCRN1-203ENST00000409570 TDRG1Q3Y452 100 aa11.15□□□□□ -0.62
SCRN1-203ENST00000409570 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
SCRN1-203ENST00000409570 MBD3L1Q8WWY6 194 aa11.15□□□□□ -0.62
SCRN1-203ENST00000409570 NDFIP1Q9BT67 221 aa11.15□□□□□ -0.62
SCRN1-203ENST00000409570 TM2D2Q9BX73 214 aa11.15□□□□□ -0.62
SCRN1-203ENST00000409570 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
SCRN1-203ENST00000409570 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
SCRN1-203ENST00000409570 LECT2O14960 151 aa11.14□□□□□ -0.63
SCRN1-203ENST00000409570 LINC01620Q4KN68 170 aa11.14□□□□□ -0.63
SCRN1-203ENST00000409570 LELP1Q5T871 98 aa11.14□□□□□ -0.63
SCRN1-203ENST00000409570 CYB561D1Q8N8Q1 229 aa11.14□□□□□ -0.63
SCRN1-203ENST00000409570 SLC25A29Q8N8R3 303 aa11.14□□□□□ -0.63
SCRN1-203ENST00000409570 NAGKQ9UJ70 344 aa11.14□□□□□ -0.63
SCRN1-203ENST00000409570 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.13□□□□□ -0.63
SCRN1-203ENST00000409570 FHITP49789 147 aa11.13□□□□□ -0.63
SCRN1-203ENST00000409570 FGF8P55075 233 aaPredicted RBP11.13□□□□□ -0.63
SCRN1-203ENST00000409570 ZFP69Q49AA0 526 aa11.13□□□□□ -0.63
SCRN1-203ENST00000409570 Q8N3U1 123 aa11.13□□□□□ -0.63
SCRN1-203ENST00000409570 TMEM75Q8N9X5 138 aa11.13□□□□□ -0.63
SCRN1-203ENST00000409570 FAM213BQ8TBF2 198 aa11.13□□□□□ -0.63
SCRN1-203ENST00000409570 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
SCRN1-203ENST00000409570 FAM74A7A6NL05 159 aa11.12□□□□□ -0.63
SCRN1-203ENST00000409570 F6UZH7 168 aa11.12□□□□□ -0.63
SCRN1-203ENST00000409570 TEX46H3BTG2 121 aa11.12□□□□□ -0.63
SCRN1-203ENST00000409570 IFNA7P01567 189 aa11.12□□□□□ -0.63
SCRN1-203ENST00000409570 H2AFB1P0C5Y9 115 aa11.12□□□□□ -0.63
SCRN1-203ENST00000409570 GNG5P63218 68 aa11.12□□□□□ -0.63
SCRN1-203ENST00000409570 SFT2D1Q8WV19 159 aa11.12□□□□□ -0.63
SCRN1-203ENST00000409570 TREM1Q9NP99 234 aa11.12□□□□□ -0.63
SCRN1-203ENST00000409570 TYMSP04818 313 aa11.11□□□□□ -0.63
SCRN1-203ENST00000409570 UBE2G2P60604 165 aa11.11□□□□□ -0.63
SCRN1-203ENST00000409570 SAPCD1Q5SSQ6 148 aa11.11□□□□□ -0.63
SCRN1-203ENST00000409570 TRAV8-1A0A0A6YYK1 113 aa11.1□□□□□ -0.63
SCRN1-203ENST00000409570 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
SCRN1-203ENST00000409570 FLI1Q01543 452 aaPredicted RBP11.1□□□□□ -0.63
SCRN1-203ENST00000409570 RHOHQ15669 191 aa11.1□□□□□ -0.63
SCRN1-203ENST00000409570 PRADC1Q9BSG0 188 aa11.1□□□□□ -0.63
SCRN1-203ENST00000409570 CHAC1Q9BUX1 264 aa11.1□□□□□ -0.63
SCRN1-203ENST00000409570 GTSF1LQ9H1H1 148 aa11.1□□□□□ -0.63
SCRN1-203ENST00000409570 PSG8Q9UQ74 426 aa11.1□□□□□ -0.63
SCRN1-203ENST00000409570 TRAV1-1A0A0B4J248 108 aa11.09□□□□□ -0.63
SCRN1-203ENST00000409570 TRBV6-4A0A1B0GX49 114 aa11.09□□□□□ -0.63
SCRN1-203ENST00000409570 PEX7O00628 323 aa11.09□□□□□ -0.63
SCRN1-203ENST00000409570 SULT1A2P50226 295 aa11.09□□□□□ -0.63
SCRN1-203ENST00000409570 C9orf62Q8N4C0 152 aa11.09□□□□□ -0.63
SCRN1-203ENST00000409570 BAALCQ8WXS3 180 aa11.09□□□□□ -0.63
SCRN1-203ENST00000409570 TRAV8-3A0A0A6YYJ7 113 aa11.08□□□□□ -0.64
SCRN1-203ENST00000409570 RS1O15537 224 aa11.08□□□□□ -0.64
SCRN1-203ENST00000409570 IGLV2-11P01706 119 aa11.08□□□□□ -0.64
SCRN1-203ENST00000409570 CFAP126Q5VTH2 177 aa11.08□□□□□ -0.64
SCRN1-203ENST00000409570 CST9LP1Q5W188 147 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms