RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 C16orf95Q9H693 158 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 CRXO43186 299 aaPredicted RBP15.4■□□□□ 0.06
USP39-203ENST00000409470 DEFB131AP59861 70 aa15.4■□□□□ 0.06
USP39-203ENST00000409470 SPATA45Q537H7 98 aa15.4■□□□□ 0.06
USP39-203ENST00000409470 TRAV2A0A0B4J234 112 aa15.39■□□□□ 0.05
USP39-203ENST00000409470 TRAV26-2A0A0B4J265 109 aa15.39■□□□□ 0.05
USP39-203ENST00000409470 C20orf202A1L168 122 aa15.39■□□□□ 0.05
USP39-203ENST00000409470 CD7P09564 240 aa15.39■□□□□ 0.05
USP39-203ENST00000409470 OR2K2Q8NGT1 345 aa15.39■□□□□ 0.05
USP39-203ENST00000409470 HILS1P60008 231 aa15.39■□□□□ 0.05
USP39-203ENST00000409470 CITED2Q99967 270 aaPredicted RBP15.39■□□□□ 0.05
USP39-203ENST00000409470 SORL1Q92673 2214 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 A0A096LNJ9 63 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 KNCNA6PVL3 124 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 H0Y8G0 127 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 CCL24O00175 119 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 DEFB114Q30KQ6 69 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 ZNF705AQ6ZN79 300 aaPredicted RBP15.38■□□□□ 0.05
USP39-203ENST00000409470 NXT2Q9NPJ8 142 aaKnown RBP15.38■□□□□ 0.05
USP39-203ENST00000409470 TSSC4Q9Y5U2 329 aaPredicted RBP15.38■□□□□ 0.05
USP39-203ENST00000409470 MTORP42345 2549 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 AGRNO00468 2067 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 FXYD7P58549 80 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 C14orf178Q8N769 122 aaPredicted RBP15.38■□□□□ 0.05
USP39-203ENST00000409470 ZNF747Q9BV97 191 aa15.38■□□□□ 0.05
USP39-203ENST00000409470 CUBNO60494 3623 aa15.37■□□□□ 0.05
USP39-203ENST00000409470 NF1P21359 2839 aa15.37■□□□□ 0.05
USP39-203ENST00000409470 HBDP02042 147 aa15.37■□□□□ 0.05
USP39-203ENST00000409470 PET117Q6UWS5 81 aa15.37■□□□□ 0.05
USP39-203ENST00000409470 MRAP2Q96G30 205 aa15.37■□□□□ 0.05
USP39-203ENST00000409470 DPH3P1Q9H4G8 78 aa15.37■□□□□ 0.05
USP39-203ENST00000409470 CTAG1AP78358 180 aa15.36■□□□□ 0.05
USP39-203ENST00000409470 FHL3Q13643 280 aa15.36■□□□□ 0.05
USP39-203ENST00000409470 AP1S3Q96PC3 154 aa15.36■□□□□ 0.05
USP39-203ENST00000409470 OR4C46A6NHA9 309 aa15.36■□□□□ 0.05
USP39-203ENST00000409470 MAJINQ3KP22 176 aa15.36■□□□□ 0.05
USP39-203ENST00000409470 CD300EQ496F6 205 aaPredicted RBP15.36■□□□□ 0.05
USP39-203ENST00000409470 AMTNQ6UX39 209 aa15.36■□□□□ 0.05
USP39-203ENST00000409470 NRACQ8N912 160 aa15.36■□□□□ 0.05
USP39-203ENST00000409470 MIEN1Q9BRT3 115 aa15.36■□□□□ 0.05
USP39-203ENST00000409470 TRAV9-2A0A087WT02 112 aa15.35■□□□□ 0.05
USP39-203ENST00000409470 LY6G6DO95868 133 aa15.35■□□□□ 0.05
USP39-203ENST00000409470 MGPP08493 103 aa15.34■□□□□ 0.05
USP39-203ENST00000409470 HLA-DRB4P13762 266 aa15.34■□□□□ 0.05
USP39-203ENST00000409470 HLA-DRB4X5D2U9 266 aa15.34■□□□□ 0.05
USP39-203ENST00000409470 IGHV1OR15-1A0A075B7D0 117 aa15.34■□□□□ 0.05
USP39-203ENST00000409470 Q8N8P6 123 aa15.34■□□□□ 0.05
USP39-203ENST00000409470 HIVEP2P31629 2446 aa15.33■□□□□ 0.05
USP39-203ENST00000409470 LINC01546A6NGU7 62 aa15.33■□□□□ 0.04
USP39-203ENST00000409470 NXPH4O95158 308 aa15.33■□□□□ 0.04
USP39-203ENST00000409470 ZNF124Q15973 351 aa15.33■□□□□ 0.04
USP39-203ENST00000409470 MCRIP2Q9BUT9 160 aaKnown RBP15.33■□□□□ 0.04
USP39-203ENST00000409470 MAP6D1Q9H9H5 199 aa15.33■□□□□ 0.04
USP39-203ENST00000409470 H3BMM0 161 aa15.33■□□□□ 0.04
USP39-203ENST00000409470 JMJD8Q96S16 334 aa15.33■□□□□ 0.04
USP39-203ENST00000409470 SPAG8Q99932 426 aaPredicted RBP15.33■□□□□ 0.04
USP39-203ENST00000409470 IGHV3-16A0A0C4DH30 117 aa15.32■□□□□ 0.04
USP39-203ENST00000409470 Q8N1Y9 231 aa15.32■□□□□ 0.04
USP39-203ENST00000409470 SMIM17P0DL12 118 aa15.31■□□□□ 0.04
USP39-203ENST00000409470 MUC4Q99102 2169 aa15.31■□□□□ 0.04
USP39-203ENST00000409470 PRSS47A8MTI9 375 aa15.31■□□□□ 0.04
USP39-203ENST00000409470 MDFICQ9P1T7 246 aa15.31■□□□□ 0.04
USP39-203ENST00000409470 IGLV2-18A0A075B6J9 118 aa15.3■□□□□ 0.04
USP39-203ENST00000409470 NDUFA7O95182 113 aa15.3■□□□□ 0.04
USP39-203ENST00000409470 FCER1GP30273 86 aa15.3■□□□□ 0.04
USP39-203ENST00000409470 LINC01545Q5VT33 79 aa15.3■□□□□ 0.04
USP39-203ENST00000409470 TRAV25A0A0B4J276 109 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 DEFB125Q8N687 156 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 C9orf85Q96MD7 179 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 PMCHL2Q9BQD1 86 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 NOTCH2Q04721 2471 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 A8MTW9 85 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 IGLC3P0DOY3 106 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 IGLL1P15814 213 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 IFI27L1Q96BM0 104 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 UQCR10Q9UDW1 63 aa15.29■□□□□ 0.04
USP39-203ENST00000409470 ZNF256Q9Y2P7 627 aaPredicted RBP15.29■□□□□ 0.04
USP39-203ENST00000409470 SYT8Q8NBV8 401 aa15.28■□□□□ 0.04
USP39-203ENST00000409470 RASL10AQ92737 203 aa15.28■□□□□ 0.04
USP39-203ENST00000409470 WNK1Q9H4A3 2382 aa15.28■□□□□ 0.04
USP39-203ENST00000409470 RBMY1BA6NDE4 496 aaKnown RBP15.27■□□□□ 0.04
USP39-203ENST00000409470 RBMY1EA6NEQ0 496 aaKnown RBP15.27■□□□□ 0.04
USP39-203ENST00000409470 RBMY1DP0C7P1 496 aaKnown RBP15.27■□□□□ 0.04
USP39-203ENST00000409470 JPT2Q9H910 190 aa15.27■□□□□ 0.04
USP39-203ENST00000409470 SETD2Q9BYW2 2564 aaPredicted RBP15.27■□□□□ 0.04
USP39-203ENST00000409470 TRGV11A0A075B6L2 103 aa15.27■□□□□ 0.03
USP39-203ENST00000409470 CBY3A6NI87 242 aa15.27■□□□□ 0.03
USP39-203ENST00000409470 HSBP1L1C9JCN9 74 aa15.27■□□□□ 0.03
USP39-203ENST00000409470 LAGE3Q14657 143 aa15.27■□□□□ 0.03
USP39-203ENST00000409470 TMEM158Q8WZ71 300 aa15.27■□□□□ 0.03
USP39-203ENST00000409470 RPL39LQ96EH5 51 aaKnown RBP15.27■□□□□ 0.03
USP39-203ENST00000409470 C18orf15Q96N68 181 aa15.27■□□□□ 0.03
USP39-203ENST00000409470 SMIM2Q9BVW6 85 aa15.27■□□□□ 0.03
USP39-203ENST00000409470 hDV102S1A0JD36 115 aa15.26■□□□□ 0.03
USP39-203ENST00000409470 TCAPO15273 167 aa15.26■□□□□ 0.03
USP39-203ENST00000409470 RBMY1A1P0DJD3 496 aaKnown RBP15.26■□□□□ 0.03
USP39-203ENST00000409470 RBMY1CP0DJD4 496 aa15.26■□□□□ 0.03
USP39-203ENST00000409470 SUMO2P61956 95 aaKnown RBP15.26■□□□□ 0.03
USP39-203ENST00000409470 RBMY1FQ15415 496 aaKnown RBP15.26■□□□□ 0.03
USP39-203ENST00000409470 KIF25-AS1Q9Y6Z4 181 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms