RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 AVPP01185 164 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 TTC9CQ8N5M4 171 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 TMEM158Q8WZ71 300 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 CCDC140Q96MF4 163 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 RHPN1-AS1Q9BWJ2 59 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 RPS20P60866 119 aaKnown RBP10.29□□□□□ -0.76
COL6A2-204ENST00000409416 SRSF2Q01130 221 aaKnown RBP10.29□□□□□ -0.76
COL6A2-204ENST00000409416 ZC2HC1BQ5TFG8 222 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 CD7P09564 240 aa10.28□□□□□ -0.76
COL6A2-204ENST00000409416 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
COL6A2-204ENST00000409416 ANXA2RQ3ZCQ2 193 aa10.28□□□□□ -0.76
COL6A2-204ENST00000409416 A0A0G2JLM5 398 aa10.28□□□□□ -0.76
COL6A2-204ENST00000409416 FABP2P12104 132 aa10.27□□□□□ -0.76
COL6A2-204ENST00000409416 H7C2G1 150 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 SIRPDQ9H106 197 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 IGHV1-69DA0A0B4J2H0 117 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 TRBV6-1A0A0K0K1D8 114 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 IGHV1-69P01742 117 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 ZNF493Q6ZR52 646 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 C1orf122Q6ZSJ8 110 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 DTX2Q86UW9 622 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 MOB4Q9Y3A3 225 aa10.27□□□□□ -0.77
COL6A2-204ENST00000409416 GAGE12HA6NDE8 117 aa10.26□□□□□ -0.77
COL6A2-204ENST00000409416 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
COL6A2-204ENST00000409416 LGALS9BQ3B8N2 356 aa10.26□□□□□ -0.77
COL6A2-204ENST00000409416 LGALS9CQ6DKI2 356 aa10.26□□□□□ -0.77
COL6A2-204ENST00000409416 NPFFR1Q9GZQ6 430 aa10.26□□□□□ -0.77
COL6A2-204ENST00000409416 K7ERJ3 54 aa10.26□□□□□ -0.77
COL6A2-204ENST00000409416 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
COL6A2-204ENST00000409416 DEFB112Q30KQ8 113 aa10.26□□□□□ -0.77
COL6A2-204ENST00000409416 COX6B1P14854 86 aa10.25□□□□□ -0.77
COL6A2-204ENST00000409416 C11orf71Q6IPW1 123 aa10.25□□□□□ -0.77
COL6A2-204ENST00000409416 BUB3O43684 328 aa10.25□□□□□ -0.77
COL6A2-204ENST00000409416 IGHG4P01861 327 aa10.25□□□□□ -0.77
COL6A2-204ENST00000409416 ZNF56Q15929 161 aa10.25□□□□□ -0.77
COL6A2-204ENST00000409416 RPL39LQ96EH5 51 aaKnown RBP10.25□□□□□ -0.77
COL6A2-204ENST00000409416 IGKV2D-26A0A0A0MRZ7 120 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 KRTAP10-9P60411 292 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 SEC11AP67812 179 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 DPF1Q92782 380 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 C11orf21Q9P2W6 132 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 MUC4Q99102 2169 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 MSMBP08118 114 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 NHP2Q9NX24 153 aaKnown RBP10.24□□□□□ -0.77
COL6A2-204ENST00000409416 TMEM8BA6NDV4 472 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 RNASE13Q5GAN3 156 aaKnown RBP10.24□□□□□ -0.77
COL6A2-204ENST00000409416 MINOS1Q5TGZ0 78 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 SHISA2Q6UWI4 295 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 FAM110DQ8TAY7 271 aaPredicted RBP10.24□□□□□ -0.77
COL6A2-204ENST00000409416 MYOZ3Q8TDC0 251 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 MINOS1-NBL1R4GNA1 71 aa10.24□□□□□ -0.77
COL6A2-204ENST00000409416 ADAMTSL5Q6ZMM2 481 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 RNF185Q96GF1 192 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 IGKCP01834 107 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 ETDBQ3ZM63 59 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 CITED1Q99966 193 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 FGF6P10767 208 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 HERV-K104P63124 156 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 SH2D6Q7Z4S9 175 aa10.23□□□□□ -0.77
COL6A2-204ENST00000409416 IGKV3OR2-268A0A0C4DH90 116 aa10.22□□□□□ -0.77
COL6A2-204ENST00000409416 FAM159AQ6UWV7 190 aa10.22□□□□□ -0.77
COL6A2-204ENST00000409416 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
COL6A2-204ENST00000409416 C5orf56Q8N8D9 126 aa10.22□□□□□ -0.77
COL6A2-204ENST00000409416 AJUBAQ96IF1 538 aa10.22□□□□□ -0.77
COL6A2-204ENST00000409416 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
COL6A2-204ENST00000409416 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
COL6A2-204ENST00000409416 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.22□□□□□ -0.77
COL6A2-204ENST00000409416 BOD1L2Q8IYS8 172 aa10.22□□□□□ -0.77
COL6A2-204ENST00000409416 U3KQK5 164 aa10.22□□□□□ -0.77
COL6A2-204ENST00000409416 A0A0U1RRA0 63 aa10.21□□□□□ -0.77
COL6A2-204ENST00000409416 B5MCH6 92 aa10.21□□□□□ -0.77
COL6A2-204ENST00000409416 CD300EQ496F6 205 aaPredicted RBP10.21□□□□□ -0.77
COL6A2-204ENST00000409416 PRR9Q5T870 116 aa10.21□□□□□ -0.77
COL6A2-204ENST00000409416 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.77
COL6A2-204ENST00000409416 IGHV3-16A0A0C4DH30 117 aa10.21□□□□□ -0.78
COL6A2-204ENST00000409416 C9orf118A6NHY6 69 aa10.21□□□□□ -0.78
COL6A2-204ENST00000409416 SMIM20Q8N5G0 67 aa10.21□□□□□ -0.78
COL6A2-204ENST00000409416 OR9G4Q8NGQ1 327 aa10.21□□□□□ -0.78
COL6A2-204ENST00000409416 SLC50A1Q9BRV3 221 aa10.21□□□□□ -0.78
COL6A2-204ENST00000409416 FXYD2P54710 66 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 C18orf65Q6ZTR6 163 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 UBE2E2Q96LR5 201 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 DPM2O94777 84 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 CHAC1Q9BUX1 264 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 K7EP34 96 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 IGHV3-53P01767 116 aa10.2□□□□□ -0.78
COL6A2-204ENST00000409416 ODF1Q14990 250 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 FBXL19-AS1Q494R0 122 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 SAMD5Q5TGI4 173 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 Q8N6K4 173 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 NBEAL1Q6ZS30 2694 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 H3BRM9 83 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 NPC2P61916 151 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 SCGB3A1Q96QR1 104 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 ASIPP42127 132 aa10.19□□□□□ -0.78
COL6A2-204ENST00000409416 GATD1Q8NB37 220 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms