RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TM4SF20Q53R12 229 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 SMIM2Q9BVW6 85 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 CR1P17927 2039 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 A0A087WX48 190 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 GAGE10A6NGK3 116 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 J3KRW8 73 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 GNRH2O43555 120 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 IGHV3-11P01762 117 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 ZC2HC1BQ5TFG8 222 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 UFC1Q9Y3C8 167 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 RPL24P83731 157 aaKnown RBP7.38□□□□□ -1.23
MSH2-202ENST00000406134 LY6EQ16553 131 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 MRAP2Q96G30 205 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 H3BUT2 72 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 H3BUX3 64 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 K7EP34 96 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 K7ERJ3 54 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 DCANP1Q8TF63 244 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 CHAC1Q9BUX1 264 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 DOPEY2Q9Y3R5 2298 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 A0A0G2JLM5 398 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 KLLNB2CW77 178 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 G3V4G9 280 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 DPM2O94777 84 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 TSHBP01222 138 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 C10orf99Q6UWK7 81 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 LINC00477Q96M19 166 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 AP1S3Q96PC3 154 aa7.38□□□□□ -1.23
MSH2-202ENST00000406134 CCDC168Q8NDH2 2452 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 H3BUA1 57 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 ATP5LO75964 103 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 CRYGDP07320 174 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 TM2D2Q9BX73 214 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 A0A1W2PPM0 123 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 SPANXN1Q5VSR9 72 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 A0A096LNT2 108 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 MED14OSP0DP75 135 aa7.37□□□□□ -1.23
MSH2-202ENST00000406134 CENPEQ02224 2701 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 NACAE9PAV3 2078 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 UBR5O95071 2799 aaPredicted RBP7.36□□□□□ -1.23
MSH2-202ENST00000406134 TRAV12-1A0A0B4J245 112 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 PRSS1P07477 247 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 NEGR1Q7Z3B1 354 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 C14orf178Q8N769 122 aaPredicted RBP7.36□□□□□ -1.23
MSH2-202ENST00000406134 SMPXQ9UHP9 88 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 TLN2Q9Y4G6 2542 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 M0R381 172 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 SUMO2P61956 95 aaKnown RBP7.36□□□□□ -1.23
MSH2-202ENST00000406134 RAB37Q96AX2 223 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 TMEM160Q9NX00 188 aa7.36□□□□□ -1.23
MSH2-202ENST00000406134 TRBV7-3A0A075B6L6 115 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 OVOL1O14753 267 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 USMG5Q96IX5 58 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 ZNF479Q96JC4 524 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 JPT2Q9H910 190 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 SETD2Q9BYW2 2564 aaPredicted RBP7.35□□□□□ -1.23
MSH2-202ENST00000406134 TRAV21A0A0B4J279 112 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 A6NDN8 102 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 PSMB8P28062 276 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 SRSF1Q07955 248 aaKnown RBP eCLIP7.35□□□□□ -1.23
MSH2-202ENST00000406134 CEND1Q8N111 149 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 BAALCQ8WXS3 180 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 SRD5A1P18405 259 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 RNASE4P34096 147 aaKnown RBP7.35□□□□□ -1.23
MSH2-202ENST00000406134 PIMREGQ9BSJ6 248 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 SS18L2Q9UHA2 77 aa7.35□□□□□ -1.23
MSH2-202ENST00000406134 COX6B1P14854 86 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 MORN3Q6PF18 240 aaPredicted RBP7.34□□□□□ -1.23
MSH2-202ENST00000406134 C20orf78Q9BR46 151 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 TRBV7-9A0A0J9YWB2 115 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 CCL19Q99731 98 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 IGLV4-69A0A075B6H9 119 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 F8VRH5 84 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 SLC25A16P16260 332 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 NRGNQ92686 78 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 ZNF580Q9UK33 172 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 DOPEY1Q5JWR5 2465 aa7.34□□□□□ -1.23
MSH2-202ENST00000406134 HERV-K104P63124 156 aa7.33□□□□□ -1.24
MSH2-202ENST00000406134 OR10J6PQ8NGY7 276 aa7.33□□□□□ -1.24
MSH2-202ENST00000406134 GEMIN7Q9H840 131 aaKnown RBP7.33□□□□□ -1.24
MSH2-202ENST00000406134 EPG5Q9HCE0 2579 aa7.33□□□□□ -1.24
MSH2-202ENST00000406134 MSMBP08118 114 aa7.33□□□□□ -1.24
MSH2-202ENST00000406134 ASIPP42127 132 aa7.33□□□□□ -1.24
MSH2-202ENST00000406134 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
MSH2-202ENST00000406134 GCSHP23434 173 aa7.33□□□□□ -1.24
MSH2-202ENST00000406134 DAZ1Q9NQZ3 744 aaKnown RBP7.33□□□□□ -1.24
MSH2-202ENST00000406134 ANK3Q12955 4377 aaKnown RBP7.33□□□□□ -1.24
MSH2-202ENST00000406134 USP9YO00507 2555 aaPredicted RBP7.32□□□□□ -1.24
MSH2-202ENST00000406134 PLNP26678 52 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 IGHV4OR15-8A0A075B7B6 117 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 A0A087WW49 117 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 IGIPA6NJ69 53 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms