RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 NBDYA0A0U1RRE5 68 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 F5H768 121 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 GCGP01275 180 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 LRP2P98164 4655 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 DAZ2Q13117 558 aaKnown RBP4.32□□□□□ -1.72
RPA3-204ENST00000406109 TMEM183BQ1AE95 376 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 TMEM88Q6PEY1 159 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 TMEM183AQ8IXX5 376 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 C6orf223Q8N319 242 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 ZNF680Q8NEM1 530 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 ZNRF2Q8NHG8 242 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 FMC1Q96HJ9 113 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
RPA3-204ENST00000406109 TRGV11A0A075B6L2 103 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 TRGV2A0A075B6R0 118 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 FABP5P3A8MUU1 101 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 IFNA1P01562 189 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 ATP5G1P05496 136 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 S100A9P06702 114 aaKnown RBP4.31□□□□□ -1.72
RPA3-204ENST00000406109 AKR1C3P42330 323 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 TCL1AP56279 114 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 FAM3BP58499 235 aaPredicted RBP4.31□□□□□ -1.72
RPA3-204ENST00000406109 BLOC1S1P78537 153 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 OR5I1Q13606 314 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 IBA57Q5T440 356 aaKnown RBP4.31□□□□□ -1.72
RPA3-204ENST00000406109 Q6ZTI0 123 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 C11orf72Q8NBR9 251 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 KCNS1Q96KK3 526 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 TCEAL7Q9BRU2 100 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 SDF2L1Q9HCN8 221 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 MANBALQ9NQG1 85 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 MRPL16Q9NX20 251 aaKnown RBP4.31□□□□□ -1.72
RPA3-204ENST00000406109 ZFP30Q9Y2G7 519 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 ARL2-SNX15V9GYD0 113 aa4.31□□□□□ -1.72
RPA3-204ENST00000406109 TRBV6-1A0A0K0K1D8 114 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 RAB19A4D1S5 217 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 EPM2AB3EWF7 344 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 SPINK4O60575 86 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 IGHV3-53P01767 116 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 ORM1P02763 201 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 TYMSP04818 313 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 PFN1P07737 140 aaKnown RBP4.3□□□□□ -1.72
RPA3-204ENST00000406109 INAFM2P0DMQ5 153 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 CRIP1P50238 77 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 XGP55808 180 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 TDRG1Q3Y452 100 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 Q86TA4 180 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 BAGE2Q86Y30 109 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 NHLRC2Q8NBF2 726 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 ZC2HC1AQ96GY0 325 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 SPXQ9BT56 116 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 MED9Q9NWA0 146 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 C11orf21Q9P2W6 132 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 VAX2Q9UIW0 290 aa4.3□□□□□ -1.72
RPA3-204ENST00000406109 IGHV3-16A0A0C4DH30 117 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 GRIFINA4D1Z8 144 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 RBFOX3A6NFN3 312 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 C9JCJ5 164 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 SH2D1AO60880 128 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 NUDT3O95989 172 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 LTAP01374 205 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 S100A4P26447 101 aaKnown RBP4.29□□□□□ -1.72
RPA3-204ENST00000406109 RPL35P42766 123 aaKnown RBP4.29□□□□□ -1.72
RPA3-204ENST00000406109 FAM162BQ5T6X4 162 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 TXNDC17Q9BRA2 123 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 LINC00588Q9Y4M8 146 aa4.29□□□□□ -1.72
RPA3-204ENST00000406109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.29□□□□□ -1.72
RPA3-204ENST00000406109 TRAV26-1A0A087WT03 109 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 TMSB15BA0A087X1C1 80 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 IGKV3D-20A0A0C4DH25 116 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 A0A0J9YY99 117 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 B4DEV8 164 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 KRBOX1C9JBD0 128 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 M0R036 132 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 M0R2P5 195 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 PDE6DO43924 150 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 BCL2P10415 239 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 HOXA5P20719 270 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
RPA3-204ENST00000406109 MEF2BQ02080 365 aaPredicted RBP4.28□□□□□ -1.72
RPA3-204ENST00000406109 PRR27Q6MZM9 219 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 COX8CQ7Z4L0 72 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 C15orf53Q8NAA6 179 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 PCNPQ8WW12 178 aaKnown RBP4.28□□□□□ -1.72
RPA3-204ENST00000406109 DERL1Q9BUN8 251 aa4.28□□□□□ -1.72
RPA3-204ENST00000406109 EIF5A2Q9GZV4 153 aaKnown RBP4.28□□□□□ -1.72
RPA3-204ENST00000406109 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
RPA3-204ENST00000406109 PGPEP1LA6NFU8 196 aa4.27□□□□□ -1.73
RPA3-204ENST00000406109 EREGO14944 169 aa4.27□□□□□ -1.73
RPA3-204ENST00000406109 ARMS2P0C7Q2 107 aa4.27□□□□□ -1.73
RPA3-204ENST00000406109 MGST1P10620 155 aaKnown RBP4.27□□□□□ -1.73
RPA3-204ENST00000406109 BTF3P20290 206 aaKnown RBP4.27□□□□□ -1.73
RPA3-204ENST00000406109 FUSP35637 526 aaKnown RBP eCLIP4.27□□□□□ -1.73
RPA3-204ENST00000406109 ASIPP42127 132 aa4.27□□□□□ -1.73
RPA3-204ENST00000406109 CEBPGP53567 150 aa4.27□□□□□ -1.73
RPA3-204ENST00000406109 FHL2Q14192 279 aa4.27□□□□□ -1.73
RPA3-204ENST00000406109 ZNF674Q2M3X9 581 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms