RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 LENEPQ9Y5L5 61 aa11.91□□□□□ -0.5
TOM1-203ENST00000404284 CEND1Q8N111 149 aa11.91□□□□□ -0.5
TOM1-203ENST00000404284 SOCS3O14543 225 aa11.9□□□□□ -0.5
TOM1-203ENST00000404284 IGKCP01834 107 aa11.9□□□□□ -0.5
TOM1-203ENST00000404284 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
TOM1-203ENST00000404284 CELSR1Q9NYQ6 3014 aa11.9□□□□□ -0.5
TOM1-203ENST00000404284 ATP5LO75964 103 aa11.9□□□□□ -0.5
TOM1-203ENST00000404284 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
TOM1-203ENST00000404284 LAGE3Q14657 143 aa11.9□□□□□ -0.51
TOM1-203ENST00000404284 PSMG4Q5JS54 123 aa11.9□□□□□ -0.51
TOM1-203ENST00000404284 TRBV25-1A0A075B6N4 114 aa11.89□□□□□ -0.51
TOM1-203ENST00000404284 NDUFA4O00483 81 aa11.89□□□□□ -0.51
TOM1-203ENST00000404284 SMIM20Q8N5G0 67 aa11.89□□□□□ -0.51
TOM1-203ENST00000404284 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
TOM1-203ENST00000404284 DPM2O94777 84 aa11.89□□□□□ -0.51
TOM1-203ENST00000404284 HIGD1BQ9P298 99 aa11.89□□□□□ -0.51
TOM1-203ENST00000404284 J3KRW8 73 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 DEFB1P60022 68 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 C12orf74Q32Q52 190 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 ANXA2RQ3ZCQ2 193 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 NFE4Q86UQ8 179 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 TMEM8BA6NDV4 472 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 GNLYP22749 145 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 NCOR2Q9Y618 2525 aa11.88□□□□□ -0.51
TOM1-203ENST00000404284 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
TOM1-203ENST00000404284 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
TOM1-203ENST00000404284 ZC2HC1BQ5TFG8 222 aa11.87□□□□□ -0.51
TOM1-203ENST00000404284 GTSCR1Q86UQ5 136 aa11.87□□□□□ -0.51
TOM1-203ENST00000404284 FAM110AQ9BQ89 295 aa11.87□□□□□ -0.51
TOM1-203ENST00000404284 C1QTNF4Q9BXJ3 329 aa11.87□□□□□ -0.51
TOM1-203ENST00000404284 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
TOM1-203ENST00000404284 IGHG2P01859 326 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 LY6EQ16553 131 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 OR10J6PQ8NGY7 276 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 VPS13CQ709C8 3753 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 CHD8Q9HCK8 2581 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 TRAV21A0A0B4J279 112 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 OVOL1O14753 267 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 SPRY2O43597 315 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 BRI3O95415 125 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 MYOZ3Q8TDC0 251 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 FAM19A4Q96LR4 140 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 KLK15Q9H2R5 256 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 PRORYQ9H606 182 aa11.86□□□□□ -0.51
TOM1-203ENST00000404284 ITPR1Q14643 2758 aa11.85□□□□□ -0.51
TOM1-203ENST00000404284 PIEZO1Q92508 2521 aa11.85□□□□□ -0.51
TOM1-203ENST00000404284 H3BUA1 57 aa11.85□□□□□ -0.51
TOM1-203ENST00000404284 HLA-DRB4P13762 266 aa11.85□□□□□ -0.51
TOM1-203ENST00000404284 SRSF1Q07955 248 aaKnown RBP eCLIP11.85□□□□□ -0.51
TOM1-203ENST00000404284 USMG5Q96IX5 58 aa11.85□□□□□ -0.51
TOM1-203ENST00000404284 PIMREGQ9BSJ6 248 aa11.85□□□□□ -0.51
TOM1-203ENST00000404284 TMEM160Q9NX00 188 aa11.85□□□□□ -0.51
TOM1-203ENST00000404284 HLA-DRB4X5D2U9 266 aa11.85□□□□□ -0.51
TOM1-203ENST00000404284 A0A087WX48 190 aa11.84□□□□□ -0.51
TOM1-203ENST00000404284 A6NDX4 124 aa11.84□□□□□ -0.51
TOM1-203ENST00000404284 M0R381 172 aa11.84□□□□□ -0.51
TOM1-203ENST00000404284 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
TOM1-203ENST00000404284 RRN3P1Q2M238 152 aa11.84□□□□□ -0.51
TOM1-203ENST00000404284 H3BUX3 64 aa11.84□□□□□ -0.51
TOM1-203ENST00000404284 SMCPP49901 116 aaPredicted RBP11.84□□□□□ -0.51
TOM1-203ENST00000404284 C10orf105Q8TEF2 133 aa11.84□□□□□ -0.51
TOM1-203ENST00000404284 RASL10AQ92737 203 aa11.84□□□□□ -0.51
TOM1-203ENST00000404284 F6UB75 175 aa11.83□□□□□ -0.52
TOM1-203ENST00000404284 Q6ZS46 218 aa11.83□□□□□ -0.52
TOM1-203ENST00000404284 APRG1Q8IVJ8 170 aa11.83□□□□□ -0.52
TOM1-203ENST00000404284 PTH2Q96A98 100 aa11.83□□□□□ -0.52
TOM1-203ENST00000404284 SPTAN1Q13813 2472 aaKnown RBP11.83□□□□□ -0.52
TOM1-203ENST00000404284 ASIPP42127 132 aa11.83□□□□□ -0.52
TOM1-203ENST00000404284 BLCAPP62952 87 aa11.82□□□□□ -0.52
TOM1-203ENST00000404284 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
TOM1-203ENST00000404284 DPH3P1Q9H4G8 78 aa11.82□□□□□ -0.52
TOM1-203ENST00000404284 RNF223E7ERA6 249 aa11.82□□□□□ -0.52
TOM1-203ENST00000404284 PF4V1P10720 104 aa11.82□□□□□ -0.52
TOM1-203ENST00000404284 S100A4P26447 101 aaKnown RBP11.82□□□□□ -0.52
TOM1-203ENST00000404284 SUMO2P61956 95 aaKnown RBP11.82□□□□□ -0.52
TOM1-203ENST00000404284 TEX29Q8N6K0 151 aa11.82□□□□□ -0.52
TOM1-203ENST00000404284 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
TOM1-203ENST00000404284 C14orf178Q8N769 122 aaPredicted RBP11.81□□□□□ -0.52
TOM1-203ENST00000404284 RPL39LQ96EH5 51 aaKnown RBP11.81□□□□□ -0.52
TOM1-203ENST00000404284 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
TOM1-203ENST00000404284 NHLRC4P0CG21 123 aaPredicted RBP11.81□□□□□ -0.52
TOM1-203ENST00000404284 RNASE4P34096 147 aaKnown RBP11.81□□□□□ -0.52
TOM1-203ENST00000404284 RPL11P62913 178 aaKnown RBP11.81□□□□□ -0.52
TOM1-203ENST00000404284 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
TOM1-203ENST00000404284 SFTA2Q6UW10 78 aa11.81□□□□□ -0.52
TOM1-203ENST00000404284 MAPKAPK5-AS1Q8N8E1 139 aa11.81□□□□□ -0.52
TOM1-203ENST00000404284 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
TOM1-203ENST00000404284 PHLDA3Q9Y5J5 127 aa11.81□□□□□ -0.52
TOM1-203ENST00000404284 IGKV3-7A0A075B6H7 116 aa11.8□□□□□ -0.52
TOM1-203ENST00000404284 TRAV12-1A0A0B4J245 112 aa11.8□□□□□ -0.52
TOM1-203ENST00000404284 RNASE3P12724 160 aaKnown RBP11.8□□□□□ -0.52
TOM1-203ENST00000404284 PLNP26678 52 aa11.8□□□□□ -0.52
TOM1-203ENST00000404284 CCL19Q99731 98 aa11.8□□□□□ -0.52
TOM1-203ENST00000404284 IGLV1-40P01703 118 aa11.8□□□□□ -0.52
TOM1-203ENST00000404284 ORMDL2Q53FV1 153 aa11.8□□□□□ -0.52
TOM1-203ENST00000404284 TOMM6Q96B49 74 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms