RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PTH2Q96A98 100 aa10.39□□□□□ -0.75
TPM1-207ENST00000403994 IGHV3-73A0A0B4J1V6 119 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 IGKV3D-20A0A0C4DH25 116 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 TRBV6-4A0A1B0GX49 114 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 EREGO14944 169 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 FUSP35637 526 aaKnown RBP eCLIP10.38□□□□□ -0.75
TPM1-207ENST00000403994 C10orf126Q8N4M7 172 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 PRADC1Q9BSG0 188 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
TPM1-207ENST00000403994 A0A087WTM6 91 aa10.37□□□□□ -0.75
TPM1-207ENST00000403994 CIDEAO60543 219 aa10.37□□□□□ -0.75
TPM1-207ENST00000403994 CDPF1Q6NVV7 123 aa10.37□□□□□ -0.75
TPM1-207ENST00000403994 Q8N1X5 172 aa10.37□□□□□ -0.75
TPM1-207ENST00000403994 NKX6-2Q9C056 277 aaPredicted RBP10.37□□□□□ -0.75
TPM1-207ENST00000403994 IGHV3-38A0A0C4DH36 116 aa10.36□□□□□ -0.75
TPM1-207ENST00000403994 SMLR1H3BR10 107 aa10.36□□□□□ -0.75
TPM1-207ENST00000403994 MGST1P10620 155 aaKnown RBP10.36□□□□□ -0.75
TPM1-207ENST00000403994 ASIPP42127 132 aa10.36□□□□□ -0.75
TPM1-207ENST00000403994 LINC01556Q5JQF7 62 aa10.36□□□□□ -0.75
TPM1-207ENST00000403994 HIST1H2BAQ96A08 127 aa10.36□□□□□ -0.75
TPM1-207ENST00000403994 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
TPM1-207ENST00000403994 PARLQ9H300 379 aa10.36□□□□□ -0.75
TPM1-207ENST00000403994 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
TPM1-207ENST00000403994 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
TPM1-207ENST00000403994 FABP5P3A8MUU1 101 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 B4DEV8 164 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 H3BVH4 76 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 FHITP49789 147 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 OR10J3Q5JRS4 329 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 PIK3CD-AS1Q5SR53 167 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 ZFP2Q6ZN57 461 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 COX8CQ7Z4L0 72 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 FMC1Q96HJ9 113 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
TPM1-207ENST00000403994 VPS13BQ7Z7G8 4022 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 TRAV8-6A0A0B4J262 113 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 A8MWV9 139 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 SH2D1AO60880 128 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 CRIP1P50238 77 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 ZNF345Q14585 488 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 LELP1Q5T871 98 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 UFSP1Q6NVU6 142 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 Q6ZSN1 163 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 TCEAL7Q9BRU2 100 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 GTSF1LQ9H1H1 148 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 SCRT2Q9NQ03 307 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 FAT1Q14517 4588 aa10.33□□□□□ -0.76
TPM1-207ENST00000403994 KRBOX1C9JBD0 128 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 M0R036 132 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 LTAP01374 205 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 UBE2G1P62253 170 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 LGALSLQ3ZCW2 172 aaPredicted RBP10.32□□□□□ -0.76
TPM1-207ENST00000403994 FAM162BQ5T6X4 162 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 KCNRGQ8N5I3 272 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 ATP6V0E2Q8NHE4 81 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 JPT2Q9H910 190 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 ZFP30Q9Y2G7 519 aa10.32□□□□□ -0.76
TPM1-207ENST00000403994 TRBV6-1A0A0K0K1D8 114 aa10.31□□□□□ -0.76
TPM1-207ENST00000403994 IBA57-AS1B1ANH7 110 aa10.31□□□□□ -0.76
TPM1-207ENST00000403994 DNLZQ5SXM8 178 aa10.31□□□□□ -0.76
TPM1-207ENST00000403994 CST9LP1Q5W188 147 aa10.31□□□□□ -0.76
TPM1-207ENST00000403994 SAMD10Q9BYL1 202 aa10.31□□□□□ -0.76
TPM1-207ENST00000403994 BOLA1Q9Y3E2 137 aa10.31□□□□□ -0.76
TPM1-207ENST00000403994 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 IGHV3-33P01772 117 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 IGHV3-30-3P0DP02 117 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 AKR1C3P42330 323 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 KRTAP10-1P60331 282 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 ZNF674Q2M3X9 581 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 Q8N3U1 123 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 OR11H4Q8NGC9 324 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 STOML3Q8TAV4 291 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 Q9HAA7 133 aa10.3□□□□□ -0.76
TPM1-207ENST00000403994 SRRM2Q9UQ35 2752 aaKnown RBP10.3□□□□□ -0.76
TPM1-207ENST00000403994 GRIFINA4D1Z8 144 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 GAGE12JA6NER3 117 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 RHODO00212 210 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 PSCAO43653 123 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 ARMS2P0C7Q2 107 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 GAGE1Q13065 139 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 GAGE4Q13068 117 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 GAGE5Q13069 117 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 LAGE3Q14657 143 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 GAGE13Q4V321 117 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 C14orf178Q8N769 122 aaPredicted RBP10.29□□□□□ -0.76
TPM1-207ENST00000403994 SYT8Q8NBV8 401 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 FAM213BQ8TBF2 198 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 Q9UF83 564 aa10.29□□□□□ -0.76
TPM1-207ENST00000403994 TMSB15BA0A087X1C1 80 aa10.28□□□□□ -0.76
TPM1-207ENST00000403994 BCL2L11O43521 198 aa10.28□□□□□ -0.76
TPM1-207ENST00000403994 PAGE4O60829 102 aa10.28□□□□□ -0.76
TPM1-207ENST00000403994 SEC11BP0C7V7 166 aa10.28□□□□□ -0.76
TPM1-207ENST00000403994 FAM74A4Q5TZK3 123 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms