RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 NIT1Q86X76 327 aa9.69□□□□□ -0.86
NDEL1-203ENST00000402554 WFDC9Q8NEX5 89 aa9.69□□□□□ -0.86
NDEL1-203ENST00000402554 U3KQK5 164 aa9.69□□□□□ -0.86
NDEL1-203ENST00000402554 TRAV12-3A0A0B4J271 114 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 KNCNA6PVL3 124 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 D6R8Y8 96 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 HSBP1O75506 76 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 CDKN1BP46527 198 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
NDEL1-203ENST00000402554 SPANXN1Q5VSR9 72 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 FAM159AQ6UWV7 190 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
NDEL1-203ENST00000402554 M0R2Z0 102 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 GNRH2O43555 120 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 HLA-DRB4P13762 266 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 DNLZQ5SXM8 178 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 AMTNQ6UX39 209 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 SMIM15Q7Z3B0 74 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 ORMDL3Q8N138 153 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 MAP6D1Q9H9H5 199 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 HLA-DRB4X5D2U9 266 aa9.68□□□□□ -0.86
NDEL1-203ENST00000402554 DNAH3Q8TD57 4116 aa9.67□□□□□ -0.86
NDEL1-203ENST00000402554 TRAV12-2A0A075B6T6 113 aa9.67□□□□□ -0.86
NDEL1-203ENST00000402554 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
NDEL1-203ENST00000402554 Q6ZWC4 215 aa9.67□□□□□ -0.86
NDEL1-203ENST00000402554 CHCHD1Q96BP2 118 aaKnown RBP9.67□□□□□ -0.86
NDEL1-203ENST00000402554 URB1-AS1Q96HZ7 61 aa9.67□□□□□ -0.86
NDEL1-203ENST00000402554 PRELID3AQ96N28 172 aa9.67□□□□□ -0.86
NDEL1-203ENST00000402554 NOTCH3Q9UM47 2321 aa9.67□□□□□ -0.86
NDEL1-203ENST00000402554 H3BMM0 161 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 RAB4AP20338 218 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 CKS2P33552 79 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 FAM19A2Q8N3H0 131 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 ZNF256Q9Y2P7 627 aaPredicted RBP9.66□□□□□ -0.86
NDEL1-203ENST00000402554 PHLDA3Q9Y5J5 127 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 A8MTW9 85 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 LINC00614P0C842 121 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 CDPF1Q6NVV7 123 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 SCRT2Q9NQ03 307 aa9.66□□□□□ -0.86
NDEL1-203ENST00000402554 PCP4L1A6NKN8 68 aa9.65□□□□□ -0.86
NDEL1-203ENST00000402554 SAP30O75446 220 aa9.65□□□□□ -0.86
NDEL1-203ENST00000402554 PPBPP02775 128 aa9.65□□□□□ -0.86
NDEL1-203ENST00000402554 EVI2AP22794 236 aa9.65□□□□□ -0.86
NDEL1-203ENST00000402554 ZNF124Q15973 351 aa9.65□□□□□ -0.86
NDEL1-203ENST00000402554 TDRG1Q3Y452 100 aa9.65□□□□□ -0.86
NDEL1-203ENST00000402554 KPRPQ5T749 579 aaPredicted RBP9.65□□□□□ -0.86
NDEL1-203ENST00000402554 PRKDCP78527 4128 aaKnown RBP9.64□□□□□ -0.87
NDEL1-203ENST00000402554 SMKR1H3BMG3 65 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 M0R381 172 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 WIPF1O43516 503 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 SCGB1D1O95968 90 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 CD7P09564 240 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 RNASE3P12724 160 aaKnown RBP9.64□□□□□ -0.87
NDEL1-203ENST00000402554 KRTAP10-11P60412 298 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 SORL1Q92673 2214 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 NCR2O95944 276 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 PRSS3P2Q8NHM4 247 aa9.64□□□□□ -0.87
NDEL1-203ENST00000402554 AGRNO00468 2067 aa9.63□□□□□ -0.87
NDEL1-203ENST00000402554 IGHV1OR15-1A0A075B7D0 117 aa9.63□□□□□ -0.87
NDEL1-203ENST00000402554 RBMY1BA6NDE4 496 aaKnown RBP9.63□□□□□ -0.87
NDEL1-203ENST00000402554 RBMY1EA6NEQ0 496 aaKnown RBP9.63□□□□□ -0.87
NDEL1-203ENST00000402554 SPRY2O43597 315 aa9.63□□□□□ -0.87
NDEL1-203ENST00000402554 RBMY1DP0C7P1 496 aaKnown RBP9.63□□□□□ -0.87
NDEL1-203ENST00000402554 FXYD7P58549 80 aa9.63□□□□□ -0.87
NDEL1-203ENST00000402554 ODF3L2Q3SX64 289 aa9.63□□□□□ -0.87
NDEL1-203ENST00000402554 FA2HQ7L5A8 372 aa9.63□□□□□ -0.87
NDEL1-203ENST00000402554 LAMTOR2Q9Y2Q5 125 aa9.63□□□□□ -0.87
NDEL1-203ENST00000402554 NPYP01303 97 aa9.62□□□□□ -0.87
NDEL1-203ENST00000402554 KRTDAPP60985 99 aa9.62□□□□□ -0.87
NDEL1-203ENST00000402554 IGHV3-16A0A0C4DH30 117 aa9.62□□□□□ -0.87
NDEL1-203ENST00000402554 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
NDEL1-203ENST00000402554 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
NDEL1-203ENST00000402554 NXPH4O95158 308 aa9.62□□□□□ -0.87
NDEL1-203ENST00000402554 MCRIP2Q9BUT9 160 aaKnown RBP9.62□□□□□ -0.87
NDEL1-203ENST00000402554 AP5S1Q9NUS5 200 aa9.62□□□□□ -0.87
NDEL1-203ENST00000402554 OR11H12B2RN74 326 aa9.61□□□□□ -0.87
NDEL1-203ENST00000402554 CRXO43186 299 aaPredicted RBP9.61□□□□□ -0.87
NDEL1-203ENST00000402554 IGLV1-51P01701 117 aa9.61□□□□□ -0.87
NDEL1-203ENST00000402554 IFI27P40305 119 aaPredicted RBP9.61□□□□□ -0.87
NDEL1-203ENST00000402554 CMC4P56277 68 aaPredicted RBP9.61□□□□□ -0.87
NDEL1-203ENST00000402554 S100A12P80511 92 aa9.61□□□□□ -0.87
NDEL1-203ENST00000402554 PMCHL1Q16048 86 aa9.61□□□□□ -0.87
NDEL1-203ENST00000402554 OR2K2Q8NGT1 345 aa9.61□□□□□ -0.87
NDEL1-203ENST00000402554 CLUHP3Q96NS8 147 aa9.61□□□□□ -0.87
NDEL1-203ENST00000402554 GSN-AS1Q9NRJ2 163 aa9.61□□□□□ -0.87
NDEL1-203ENST00000402554 C9orf66Q5T8R8 295 aa9.6□□□□□ -0.87
NDEL1-203ENST00000402554 Q8N1Y9 231 aa9.6□□□□□ -0.87
NDEL1-203ENST00000402554 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
NDEL1-203ENST00000402554 AP1S3Q96PC3 154 aa9.6□□□□□ -0.87
NDEL1-203ENST00000402554 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
NDEL1-203ENST00000402554 DPH3P1Q9H4G8 78 aa9.6□□□□□ -0.87
NDEL1-203ENST00000402554 TRGV11A0A075B6L2 103 aa9.59□□□□□ -0.87
NDEL1-203ENST00000402554 GAS8-AS1O95177 125 aa9.59□□□□□ -0.87
NDEL1-203ENST00000402554 TNFRSF6BO95407 300 aa9.59□□□□□ -0.87
NDEL1-203ENST00000402554 MRAP2Q96G30 205 aa9.59□□□□□ -0.87
NDEL1-203ENST00000402554 MDFICQ9P1T7 246 aa9.59□□□□□ -0.87
NDEL1-203ENST00000402554 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms