RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CCL18P55774 89 aa13.33□□□□□ -0.28
RTN4-207ENST00000402434 A0A096LPF7 62 aa13.32□□□□□ -0.28
RTN4-207ENST00000402434 TRGV4A0A0C4DH28 118 aa13.32□□□□□ -0.28
RTN4-207ENST00000402434 M0R036 132 aa13.32□□□□□ -0.28
RTN4-207ENST00000402434 PIK3CD-AS1Q5SR53 167 aa13.32□□□□□ -0.28
RTN4-207ENST00000402434 LINC00588Q9Y4M8 146 aa13.32□□□□□ -0.28
RTN4-207ENST00000402434 ZNF506Q5JVG8 444 aa13.31□□□□□ -0.28
RTN4-207ENST00000402434 DNAH6Q9C0G6 4158 aa13.31□□□□□ -0.28
RTN4-207ENST00000402434 RS1O15537 224 aa13.3□□□□□ -0.28
RTN4-207ENST00000402434 CIDEAO60543 219 aa13.3□□□□□ -0.28
RTN4-207ENST00000402434 CFAP126Q5VTH2 177 aa13.3□□□□□ -0.28
RTN4-207ENST00000402434 IGLV2-8P01709 118 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 ARMS2P0C7Q2 107 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 ESRGQ1W209 222 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 ZNRF2Q8NHG8 242 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 MED9Q9NWA0 146 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 GRIFINA4D1Z8 144 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 CENPWQ5EE01 88 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 SMIM12Q96EX1 92 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 SCRT2Q9NQ03 307 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 ICOSQ9Y6W8 199 aa13.29□□□□□ -0.28
RTN4-207ENST00000402434 TRBV20OR9-2A0A075B6H5 130 aa13.28□□□□□ -0.28
RTN4-207ENST00000402434 H3BVH4 76 aa13.28□□□□□ -0.28
RTN4-207ENST00000402434 MRPL23Q16540 153 aaKnown RBP13.28□□□□□ -0.28
RTN4-207ENST00000402434 Q6ZR54 194 aa13.28□□□□□ -0.28
RTN4-207ENST00000402434 TMSB15BA0A087X1C1 80 aa13.27□□□□□ -0.29
RTN4-207ENST00000402434 RAB19A4D1S5 217 aa13.27□□□□□ -0.29
RTN4-207ENST00000402434 RBFOX3A6NFN3 312 aa13.27□□□□□ -0.29
RTN4-207ENST00000402434 GATA1P15976 413 aaPredicted RBP13.27□□□□□ -0.29
RTN4-207ENST00000402434 GNG4P50150 75 aa13.27□□□□□ -0.29
RTN4-207ENST00000402434 IGLV2-18A0A075B6J9 118 aa13.26□□□□□ -0.29
RTN4-207ENST00000402434 A8MWV9 139 aa13.26□□□□□ -0.29
RTN4-207ENST00000402434 K7EQD1 137 aa13.26□□□□□ -0.29
RTN4-207ENST00000402434 CXCL1P09341 107 aa13.26□□□□□ -0.29
RTN4-207ENST00000402434 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
RTN4-207ENST00000402434 PRR27Q6MZM9 219 aa13.26□□□□□ -0.29
RTN4-207ENST00000402434 UPK3BQ9BT76 320 aa13.26□□□□□ -0.29
RTN4-207ENST00000402434 M0R2N4 97 aa13.25□□□□□ -0.29
RTN4-207ENST00000402434 RPL19P84098 196 aaKnown RBP13.25□□□□□ -0.29
RTN4-207ENST00000402434 MRPS16Q9Y3D3 137 aaKnown RBP13.25□□□□□ -0.29
RTN4-207ENST00000402434 TMEM250H0YL14 139 aa13.24□□□□□ -0.29
RTN4-207ENST00000402434 MED14OSP0DP75 135 aa13.24□□□□□ -0.29
RTN4-207ENST00000402434 GYPEP15421 78 aa13.24□□□□□ -0.29
RTN4-207ENST00000402434 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
RTN4-207ENST00000402434 NEGR1Q7Z3B1 354 aa13.24□□□□□ -0.29
RTN4-207ENST00000402434 SYT8Q8NBV8 401 aa13.24□□□□□ -0.29
RTN4-207ENST00000402434 PHLDA3Q9Y5J5 127 aa13.24□□□□□ -0.29
RTN4-207ENST00000402434 TRBV6-4A0A1B0GX49 114 aa13.23□□□□□ -0.29
RTN4-207ENST00000402434 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
RTN4-207ENST00000402434 UFSP1Q6NVU6 142 aa13.23□□□□□ -0.29
RTN4-207ENST00000402434 TEX261Q6UWH6 196 aa13.23□□□□□ -0.29
RTN4-207ENST00000402434 SLC25A29Q8N8R3 303 aa13.23□□□□□ -0.29
RTN4-207ENST00000402434 SSBP4Q9BWG4 385 aaPredicted RBP13.23□□□□□ -0.29
RTN4-207ENST00000402434 PARLQ9H300 379 aa13.23□□□□□ -0.29
RTN4-207ENST00000402434 Q9H8V8 135 aa13.23□□□□□ -0.29
RTN4-207ENST00000402434 MGST1P10620 155 aaKnown RBP13.23□□□□□ -0.29
RTN4-207ENST00000402434 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
RTN4-207ENST00000402434 JPT2Q9H910 190 aa13.23□□□□□ -0.29
RTN4-207ENST00000402434 IGHV3-73A0A0B4J1V6 119 aa13.22□□□□□ -0.29
RTN4-207ENST00000402434 NDUFS6O75380 124 aaKnown RBP13.22□□□□□ -0.29
RTN4-207ENST00000402434 SRIP30626 198 aa13.22□□□□□ -0.29
RTN4-207ENST00000402434 LYPD5Q6UWN5 251 aa13.22□□□□□ -0.29
RTN4-207ENST00000402434 ZFP82Q8N141 532 aa13.22□□□□□ -0.29
RTN4-207ENST00000402434 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.3
RTN4-207ENST00000402434 NBDYA0A0U1RRE5 68 aa13.21□□□□□ -0.3
RTN4-207ENST00000402434 SNAI2O43623 268 aa13.21□□□□□ -0.3
RTN4-207ENST00000402434 OR5AL1P0C617 328 aa13.21□□□□□ -0.3
RTN4-207ENST00000402434 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.3
RTN4-207ENST00000402434 SFRP2Q96HF1 295 aa13.21□□□□□ -0.3
RTN4-207ENST00000402434 FAM210AQ96ND0 272 aa13.21□□□□□ -0.3
RTN4-207ENST00000402434 SAMD10Q9BYL1 202 aa13.21□□□□□ -0.3
RTN4-207ENST00000402434 BIN3Q9NQY0 253 aa13.21□□□□□ -0.3
RTN4-207ENST00000402434 M0R381 172 aa13.2□□□□□ -0.3
RTN4-207ENST00000402434 NXPH4O95158 308 aa13.2□□□□□ -0.3
RTN4-207ENST00000402434 RHOHQ15669 191 aa13.2□□□□□ -0.3
RTN4-207ENST00000402434 Q6ZSN1 163 aa13.2□□□□□ -0.3
RTN4-207ENST00000402434 SH2D6Q7Z4S9 175 aa13.2□□□□□ -0.3
RTN4-207ENST00000402434 PRADC1Q9BSG0 188 aa13.2□□□□□ -0.3
RTN4-207ENST00000402434 TOR2AQ5JU69 321 aa13.19□□□□□ -0.3
RTN4-207ENST00000402434 RHODO00212 210 aa13.18□□□□□ -0.3
RTN4-207ENST00000402434 CRYGDP07320 174 aa13.18□□□□□ -0.3
RTN4-207ENST00000402434 OR10AG1Q8NH19 301 aa13.18□□□□□ -0.3
RTN4-207ENST00000402434 OCC1Q8TAD7 63 aa13.18□□□□□ -0.3
RTN4-207ENST00000402434 EIF5A2Q9GZV4 153 aaKnown RBP13.18□□□□□ -0.3
RTN4-207ENST00000402434 RTL8CO15255 209 aa13.17□□□□□ -0.3
RTN4-207ENST00000402434 RPS20P60866 119 aaKnown RBP13.17□□□□□ -0.3
RTN4-207ENST00000402434 OR2D3Q8NGH3 330 aa13.17□□□□□ -0.3
RTN4-207ENST00000402434 FRAS1Q86XX4 4008 aa13.17□□□□□ -0.3
RTN4-207ENST00000402434 P01737 135 aa13.16□□□□□ -0.3
RTN4-207ENST00000402434 LINC00336Q6ZUF6 198 aa13.16□□□□□ -0.3
RTN4-207ENST00000402434 K7EN84 100 aa13.16□□□□□ -0.3
RTN4-207ENST00000402434 IGLC6P0CF74 106 aa13.16□□□□□ -0.3
RTN4-207ENST00000402434 TIRAPP58753 221 aa13.16□□□□□ -0.3
RTN4-207ENST00000402434 NUDT10Q8NFP7 164 aa13.16□□□□□ -0.3
RTN4-207ENST00000402434 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
RTN4-207ENST00000402434 EPPK1P58107 5090 aaKnown RBP13.15□□□□□ -0.3
RTN4-207ENST00000402434 A0A087WWL8 130 aa13.15□□□□□ -0.3
RTN4-207ENST00000402434 A0A1W2PPQ1 181 aa13.15□□□□□ -0.3
RTN4-207ENST00000402434 C1orf134Q5TEV5 83 aa13.15□□□□□ -0.3
RTN4-207ENST00000402434 FAM74A4Q5TZK3 123 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms